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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAATGGGGTGGTTTATATGATCGAGGGAGCGGACCAAAGACCAGCAACTATCCTACTATGGGATATGTGGAACAACAAAACTTGGTGAAGCATTGTGGTCTAATTACATTTAGAGGAGTTTGGTTTGAGGAGGGTGATGGATTTTTTACCCAACTTAGGGGGGAGAATCTGAAGAGCCACGTATTCTGGATTCAACCTTTCGTTAGGGGTGGAAGCTCAATTTTGACGCCTCTTGGTGGAATGGGCATGACTCTTCAAGGTCTTTCCTCTCGATGGGTTATTTGA mRNA sequence ATGGAATGGGGTGGTTTATATGATCGAGGGAGCGGACCAAAGACCAGCAACTATCCTACTATGGGATATGTGGAACAACAAAACTTGGTGAAGCATTGTGGTCTAATTACATTTAGAGGAGTTTGGTTTGAGGAGGGTGATGGATTTTTTACCCAACTTAGGGGGGAGAATCTGAAGAGCCACGTATTCTGGATTCAACCTTTCGTTAGGGGTGGAAGCTCAATTTTGACGCCTCTTGGTGGAATGGGCATGACTCTTCAAGGTCTTTCCTCTCGATGGGTTATTTGA Coding sequence (CDS) ATGGAATGGGGTGGTTTATATGATCGAGGGAGCGGACCAAAGACCAGCAACTATCCTACTATGGGATATGTGGAACAACAAAACTTGGTGAAGCATTGTGGTCTAATTACATTTAGAGGAGTTTGGTTTGAGGAGGGTGATGGATTTTTTACCCAACTTAGGGGGGAGAATCTGAAGAGCCACGTATTCTGGATTCAACCTTTCGTTAGGGGTGGAAGCTCAATTTTGACGCCTCTTGGTGGAATGGGCATGACTCTTCAAGGTCTTTCCTCTCGATGGGTTATTTGA Protein sequence MEWGGLYDRGSGPKTSNYPTMGYVEQQNLVKHCGLITFRGVWFEEGDGFFTQLRGENLKSHVFWIQPFVRGGSSILTPLGGMGMTLQGLSSRWVI*
Homology
BLAST of CsaV3_3G041680 vs. NCBI nr
Match: KGN59591.1 (hypothetical protein Csa_001889 [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 5.6e-51 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query: 1 MEWGGLYDRGSGPKTSNYPTMGYVEQQNLVKHCGLITFRGVWFEEGDGFFTQLRGENLKS 60
MEWGGLYDRGSGPKTSNYPTMGYVEQQNLVKHCGLITFRGVWFEEGDGFFTQLRGENLKS
Sbjct: 1 MEWGGLYDRGSGPKTSNYPTMGYVEQQNLVKHCGLITFRGVWFEEGDGFFTQLRGENLKS 60
Query: 61 HVFWIQPFVRGGSSILTPLGGMGMTLQGLSSRWVI 96
HVFWIQPFVRGGSSILTPLGGMGMTLQGLSSRWVI
Sbjct: 61 HVFWIQPFVRGGSSILTPLGGMGMTLQGLSSRWVI 95
BLAST of CsaV3_3G041680 vs. ExPASy TrEMBL
Match: A0A0A0LHT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827330 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.7e-51 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query: 1 MEWGGLYDRGSGPKTSNYPTMGYVEQQNLVKHCGLITFRGVWFEEGDGFFTQLRGENLKS 60
MEWGGLYDRGSGPKTSNYPTMGYVEQQNLVKHCGLITFRGVWFEEGDGFFTQLRGENLKS
Sbjct: 1 MEWGGLYDRGSGPKTSNYPTMGYVEQQNLVKHCGLITFRGVWFEEGDGFFTQLRGENLKS 60
Query: 61 HVFWIQPFVRGGSSILTPLGGMGMTLQGLSSRWVI 96
HVFWIQPFVRGGSSILTPLGGMGMTLQGLSSRWVI
Sbjct: 61 HVFWIQPFVRGGSSILTPLGGMGMTLQGLSSRWVI 95
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN59591.1 | 5.6e-51 | 100.00 | hypothetical protein Csa_001889 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LHT0 | 2.7e-51 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827330 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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