CsaV3_3G041660 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G041660
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AP2-like ethylene-responsive transcription factor
Location	chr3: 33996660 .. 33997301 (-)
RNA-Seq Expression	CsaV3_3G041660
Synteny	CsaV3_3G041660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAAGGAAAAAGGAATTGGATACCAATCACAAACTTGTTTAATCTTCCACCACCAGGCACTCAAGAAGAAGCTGCTCGAGCTTATGACATGGCTGCCATAGAATACCGAGGGATCAATGCAGTCACCAACTTCGACTGGAGCAATTACATGGCCTGGCTGAAGCCTCCTCCGCCGCCATCCACCGTCCCTAACGAAGCCCATTTCCCGTCAGACCCCCATAAGGAACTCTGTAACTCCAGCTCCATCCCAGCCGATGAAACTTCACTCTTTAAAAACCATCACTACGACATTGATTCCTTTCATTCCCTTCAGAAGCAAGAGCTTCTCGAAAGCTGCAACACCCCGCTCAATGCTTATGCCAGATCTTCTTCTGCATCCGCACTTGACCTCCTTCTTCGATCATCATTTTTCAAGCAACTGGTTGAGACCAACTCGAATCTCTCCGTGGATGAAGCTGATAATGGAGATGAGGCGAAGACTCGAGTGCAGCTCGACAGTGTATTTGACGAGTTTGAAGATGTCTTCTGTGATAGACTTACAGATGTACCGTTGGTTTGCAGCTCCAACAAAGAGCTGCAAGAAAGTGAGCTTCATTCATACTTTAATGGCACATTTCATCGTTTCAAAGCAGCCTGA

mRNA sequence

ATGGCAAAAGGAAAAAGGAATTGGATACCAATCACAAACTTGTTTAATCTTCCACCACCAGGCACTCAAGAAGAAGCTGCTCGAGCTTATGACATGGCTGCCATAGAATACCGAGGGATCAATGCAGTCACCAACTTCGACTGGAGCAATTACATGGCCTGGCTGAAGCCTCCTCCGCCGCCATCCACCGTCCCTAACGAAGCCCATTTCCCGTCAGACCCCCATAAGGAACTCTGTAACTCCAGCTCCATCCCAGCCGATGAAACTTCACTCTTTAAAAACCATCACTACGACATTGATTCCTTTCATTCCCTTCAGAAGCAAGAGCTTCTCGAAAGCTGCAACACCCCGCTCAATGCTTATGCCAGATCTTCTTCTGCATCCGCACTTGACCTCCTTCTTCGATCATCATTTTTCAAGCAACTGGTTGAGACCAACTCGAATCTCTCCGTGGATGAAGCTGATAATGGAGATGAGGCGAAGACTCGAGTGCAGCTCGACAGTGTATTTGACGAGTTTGAAGATGTCTTCTGTGATAGACTTACAGATGTACCGTTGGTTTGCAGCTCCAACAAAGAGCTGCAAGAAAGTGAGCTTCATTCATACTTTAATGGCACATTTCATCGTTTCAAAGCAGCCTGA

Coding sequence (CDS)

ATGGCAAAAGGAAAAAGGAATTGGATACCAATCACAAACTTGTTTAATCTTCCACCACCAGGCACTCAAGAAGAAGCTGCTCGAGCTTATGACATGGCTGCCATAGAATACCGAGGGATCAATGCAGTCACCAACTTCGACTGGAGCAATTACATGGCCTGGCTGAAGCCTCCTCCGCCGCCATCCACCGTCCCTAACGAAGCCCATTTCCCGTCAGACCCCCATAAGGAACTCTGTAACTCCAGCTCCATCCCAGCCGATGAAACTTCACTCTTTAAAAACCATCACTACGACATTGATTCCTTTCATTCCCTTCAGAAGCAAGAGCTTCTCGAAAGCTGCAACACCCCGCTCAATGCTTATGCCAGATCTTCTTCTGCATCCGCACTTGACCTCCTTCTTCGATCATCATTTTTCAAGCAACTGGTTGAGACCAACTCGAATCTCTCCGTGGATGAAGCTGATAATGGAGATGAGGCGAAGACTCGAGTGCAGCTCGACAGTGTATTTGACGAGTTTGAAGATGTCTTCTGTGATAGACTTACAGATGTACCGTTGGTTTGCAGCTCCAACAAAGAGCTGCAAGAAAGTGAGCTTCATTCATACTTTAATGGCACATTTCATCGTTTCAAAGCAGCCTGA

Protein sequence

MAKGKRNWIPITNLFNLPPPGTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNSSSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQLVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHSYFNGTFHRFKAA*

Homology

[Close]

BLAST of CsaV3_3G041660 vs. NCBI nr
Match: KAE8651225.1 (hypothetical protein Csa_001428 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MAKGKRNWIPITNLFNLPPPGTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPP 60
           MAKGKRNWIPITNLFNLPPPGTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPP
Sbjct: 1   MAKGKRNWIPITNLFNLPPPGTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPP 60

Query: 61  PSTVPNEAHFPSDPHKELCNSSSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNA 120
           PSTVPNEAHFPSDPHKELCNSSSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNA
Sbjct: 61  PSTVPNEAHFPSDPHKELCNSSSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNA 120

Query: 121 YARSSSASALDLLLRSSFFKQLVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDR 180
           YARSSSASALDLLLRSSFFKQLVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDR
Sbjct: 121 YARSSSASALDLLLRSSFFKQLVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDR 180

Query: 181 LTDVPLVCSSNKELQESELHSYFNGTFHRFKAA 214
           LTDVPLVCSSNKELQESELHSYFNGTFHRFKAA
Sbjct: 181 LTDVPLVCSSNKELQESELHSYFNGTFHRFKAA 213

[Close]

BLAST of CsaV3_3G041660 vs. NCBI nr
Match: XP_004147491.1 (AP2-like ethylene-responsive transcription factor At1g16060 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 3.0e-105
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 206 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 265

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ
Sbjct: 266 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 325

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 326 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 385

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 386 YFNGTFHRFKAA 397

[Close]

BLAST of CsaV3_3G041660 vs. NCBI nr
Match: KAA0053744.1 (AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa])

HSP 1 Score: 390.6 bits (1002), Expect = 8.8e-105
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 200 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 259

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFK+
Sbjct: 260 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKK 319

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 320 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 379

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 380 YFNGTFHRFKAA 391

[Close]

BLAST of CsaV3_3G041660 vs. NCBI nr
Match: XP_008443427.1 (PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 isoform X1 [Cucumis melo])

HSP 1 Score: 390.6 bits (1002), Expect = 8.8e-105
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 203 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 262

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFK+
Sbjct: 263 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKK 322

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 323 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 382

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 383 YFNGTFHRFKAA 394

[Close]

BLAST of CsaV3_3G041660 vs. NCBI nr
Match: TYK25659.1 (AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa])

HSP 1 Score: 390.6 bits (1002), Expect = 8.8e-105
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 183 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 242

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFK+
Sbjct: 243 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKK 302

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 303 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 362

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 363 YFNGTFHRFKAA 374

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy Swiss-Prot
Match: Q94AN4 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKEL 79
           TQEEAA AYD+AAIEYRG+NAVTNFD S Y   LK P P + +    +    PH +L
Sbjct: 193 TQEEAAIAYDIAAIEYRGLNAVTNFDISRY---LKLPVPENPIDTANNLLESPHSDL 246

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy Swiss-Prot
Match: Q6X5Y6 (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.7e-08
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLK 57
           TQEEAA AYDMAAIEYRG NAVTNFD SNY+  LK
Sbjct: 200 TQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy Swiss-Prot
Match: Q6PQQ4 (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX=3702 GN=BBM PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 4.4e-06
Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 21  GTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSD-----PH 80
           GTQEEAA AYD+AAI++RG++AVTNFD + Y        P   + + A    D     P 
Sbjct: 344 GTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGSSAKRLKDVNNPVPA 403

Query: 81  KELCNSSSIPADETSLFKN----HHYDIDSFHSLQKQE 110
             + N+ S  A+  S ++N    HH  +D     Q+QE
Sbjct: 404 MMISNNVSESANNVSGWQNTAFQHHQGMDLSLLQQQQE 441

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy Swiss-Prot
Match: A0JPZ8 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-06
Identity = 36/95 (37.89%), Postives = 46/95 (48.42%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYM----------AWLKPPPPPSTVPNEAHFP 81
           TQEEAA AYD+AAIEYRG+NAVTNFD S Y+          +  KP   PS  P  +   
Sbjct: 177 TQEEAAIAYDIAAIEYRGLNAVTNFDVSRYLNPNAAADKADSDSKPIRSPSREPESSDDN 236

Query: 82  SDPHKELCNSSSIPADETSLFKNHHYDIDSFHSLQ 107
             P  E     S   +     ++   DI ++   Q
Sbjct: 237 KSPKSEEVIEPSTSPEVIPTRRSFPDDIQTYFGCQ 271

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy Swiss-Prot
Match: Q8LSN2 (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708 GN=BBM2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-06
Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 21  GTQEEAARAYDMAAIEYRGINAVTNFDWSNY--MAWLKPPPPP----STVPNEAHFPSDP 80
           GTQEEAA AYD+AAI++RG+ AVTNFD + Y   A L+ P  P    +    EA+ P   
Sbjct: 344 GTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPIGSAAKRLKEANRPVPS 403

Query: 81  HKELCNSSSIPADETSLFKN----HHYDIDSFHSLQKQE 110
              + N+ S   +  S ++N    HH  +D     Q QE
Sbjct: 404 MMMISNNVSESENNASGWQNAAVQHHQGVDLSLLQQHQE 442

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy TrEMBL
Match: A0A0A0LFB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827310 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 146 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 205

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ
Sbjct: 206 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 265

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 266 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 325

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 326 YFNGTFHRFKAA 337

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy TrEMBL
Match: A0A5A7UEU1 (AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001230 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 200 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 259

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFK+
Sbjct: 260 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKK 319

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 320 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 379

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 380 YFNGTFHRFKAA 391

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy TrEMBL
Match: A0A5D3DQQ5 (AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008220 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 183 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 242

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFK+
Sbjct: 243 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKK 302

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 303 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 362

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 363 YFNGTFHRFKAA 374

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy TrEMBL
Match: A0A1S3B8S9 (AP2-like ethylene-responsive transcription factor At1g16060 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487019 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 200 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 259

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFK+
Sbjct: 260 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKK 319

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 320 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 379

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 380 YFNGTFHRFKAA 391

[Close]

BLAST of CsaV3_3G041660 vs. ExPASy TrEMBL
Match: A0A1S3B8R2 (AP2-like ethylene-responsive transcription factor At1g16060 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487019 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 81
           TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS
Sbjct: 203 TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKELCNS 262

Query: 82  SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKQ 141
           SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFK+
Sbjct: 263 SSIPADETSLFKNHHYDIDSFHSLQKQELLESCNTPLNAYARSSSASALDLLLRSSFFKK 322

Query: 142 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 201
           LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS
Sbjct: 323 LVETNSNLSVDEADNGDEAKTRVQLDSVFDEFEDVFCDRLTDVPLVCSSNKELQESELHS 382

Query: 202 YFNGTFHRFKAA 214
           YFNGTFHRFKAA
Sbjct: 383 YFNGTFHRFKAA 394

[Close]

BLAST of CsaV3_3G041660 vs. TAIR 10
Match: AT1G16060.2 (ARIA-interacting double AP2 domain protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKEL 79
           TQEEAA AYD+AAIEYRG+NAVTNFD S Y   LK P P + +    +    PH +L
Sbjct: 123 TQEEAAIAYDIAAIEYRGLNAVTNFDISRY---LKLPVPENPIDTANNLLESPHSDL 176

[Close]

BLAST of CsaV3_3G041660 vs. TAIR 10
Match: AT1G16060.1 (ARIA-interacting double AP2 domain protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSTVPNEAHFPSDPHKEL 79
           TQEEAA AYD+AAIEYRG+NAVTNFD S Y   LK P P + +    +    PH +L
Sbjct: 193 TQEEAAIAYDIAAIEYRGLNAVTNFDISRY---LKLPVPENPIDTANNLLESPHSDL 246

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BLAST of CsaV3_3G041660 vs. TAIR 10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLK 57
           TQEEAA AYDMAAIEYRG NAVTNFD SNY+  LK
Sbjct: 200 TQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234

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BLAST of CsaV3_3G041660 vs. TAIR 10
Match: AT3G54320.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLK 57
           TQEEAA AYDMAAIEYRG NAVTNFD SNY+  LK
Sbjct: 126 TQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 160

[Close]

BLAST of CsaV3_3G041660 vs. TAIR 10
Match: AT3G54320.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 29/35 (82.86%), Postives = 30/35 (85.71%), Query Frame = 0


Query: 22  TQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLK 57
           TQEEAA AYDMAAIEYRG NAVTNFD SNY+  LK
Sbjct: 200 TQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234

The following BLAST results are available for this feature:

BLAST of CsaV3_3G041660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651225.1	1.3e-119	100.00	hypothetical protein Csa_001428 [Cucumis sativus]	[more]
XP_004147491.1	3.0e-105	100.00	AP2-like ethylene-responsive transcription factor At1g16060 [Cucumis sativus]	[more]
KAA0053744.1	8.8e-105	99.48	AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa]	[more]
XP_008443427.1	8.8e-105	99.48	PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 isoform X...	[more]
TYK25659.1	8.8e-105	99.48	AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_3G041660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AN4	2.7e-08	56.14	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali...	[more]
Q6X5Y6	2.7e-08	82.86	Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6PQQ4	4.4e-06	37.76	AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX...	[more]
A0JPZ8	5.7e-06	37.89	AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali...	[more]
Q8LSN2	5.7e-06	39.39	AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708...	[more]

BLAST of CsaV3_3G041660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFB3	1.5e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827310 PE=4 SV=1	[more]
A0A5A7UEU1	4.3e-105	99.48	AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX...	[more]
A0A5D3DQQ5	4.3e-105	99.48	AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3B8S9	4.3e-105	99.48	AP2-like ethylene-responsive transcription factor At1g16060 isoform X2 OS=Cucumi...	[more]
A0A1S3B8R2	4.3e-105	99.48	AP2-like ethylene-responsive transcription factor At1g16060 isoform X1 OS=Cucumi...	[more]

BLAST of CsaV3_3G041660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16060.2	2.0e-09	56.14	ARIA-interacting double AP2 domain protein	[more]
AT1G16060.1	2.0e-09	56.14	ARIA-interacting double AP2 domain protein	[more]
AT3G54320.1	2.0e-09	82.86	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.2	2.0e-09	82.86	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.3	2.0e-09	82.86	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 20..48 e-value: 2.4E-8 score: 36.0
None	No IPR available	PANTHER	PTHR32467:SF116	BINDING PROTEIN, PUTATIVE-RELATED	coord: 21..198
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 21..198
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 22..47 score: 8.517743
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 22..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G041660.1	CsaV3_3G041660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity