CsaV3_3G041480 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G041480
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Gibberellin regulated protein
Location	chr3: 33839191 .. 33840892 (-)
RNA-Seq Expression	CsaV3_3G041480
Synteny	CsaV3_3G041480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTGATATAGCCGTAAACAGCGCAAATTACGGGGCCTACGCATGTGCCATGTGTCACTCCAAATCCATACCATTCAAACCGGATACCATATGAGCGACAACACCTGATTATTTCTCACCTTCTTCTTCCTTCCTTCCTTTCCCTTCTATTTATACTCAACACACCACACCACACCACCAAAACCCAAACCCCCCATTTCCCATTTCCCATTTCCCATTTCAACCTCCTTCTTATTCCAATGGCGATGCCCAAGTTCGCTGCTCTCTTGCTCTTGGCTCTCATTGCCATTTCCATGCTTCAGACTGCTGTAACACTCTCTCCTCTGCTTACCCCATTTCTCTTTTCTTCTCTCTCTCTTTTTTCCTCACCCAACTAACTCTGTTTCTTTCTTTGTTGTTCCATCCGTTTCCCCAGGTCATGGCCGGCAGGGGTGGTCGAAACAGGGTAAAACTCCTTTTATATTACTAGCTTCCTTTGAGGCATTTTCTCCTGCTTTTAATATTTGCCCTGTTCTTGGATTTCAAAATGGACTTCCGTACGCTTTTCAACTCTTAGATCGCGAATGTAAATAAGGGTTTATAGCTCTAAGATCAACAATTTGTTTAATGCCGCATTTTGTCAAACAACTTCACATTTTGATTTGCATTGTTCTTTGCCTTCTTTTTTCAGAACCCATATGGACCAGGAAGTGTCAAAGCCTTCCGTAAGTACCTTACTAATTAACAATGCTTCCATGGAAATGGGTTTGATTTGCTTGGATTTTTCTGAAATGGGTTTGAATTAAAAATTTAACAGAATGCCCAAATCGATGTGCCACACGGTGTGGAAGAACACAATACCACAAGCCATGCATGTTTTTCTGCCAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCGCCTGGCTACTATGGAAACAAAGCCGTTTGTCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGACCCAAATGCCCTTAAAACAATAACCCCACAATTCTTTTCTCTTTTTGTTTTACCTTTTCTTTTGCATTTTTCTGCTAACCCCAACTCTTTTGTTATGAACTTGTAAGGGAGACGGGGTTGGGAAGAAATTTGTGACTCATTAGATGGGAAGAAATTTGTGACTCATTAGGTGGGAAGAAATTTGTTTCCTTTTAAGTCATATAGTGTATTTTGGGTTACTTTATCATAAGTTTATAATATTAATATATGAGTAATGAAATGAAACATCTTGTTTCTGTTTGAAGAGATCATGGTGTGTTTTATTATTGGGTATTAGAAGTGCATAATGATTAAATAGAGAATACTAATTTTCTTTAATCTTATTTCACTGTTTCCATGTGACACTATCATAATTAGTCAATACTCTGTCCTTTGCCTCACATGGATGGATTGGATGCCACTGCCAACCATTTTCAACTTCATCTATTTTTTTAATTCATTTTTACTAGATGGATTTATTTCTTTTTAAATTAAAAAAAGACAGACGAAGAAAATTTATTATTAACTCAGTCTCACTTTTTTATGCAAGTTTTTTTAAATGTTGCATTGACGGCAAATTAGAGTGAAATTGTCAAAAATGGTAAGAGTGAAAGTGAGAGAGTATGGAGAGTAAAGGGCGAGTGTTAACTGTTAAGAGTTGAGAGCCCAATCAAAAGGTAAATCAAAAGGTCGTCATAATAATAATAATGAAAAGGT

mRNA sequence

ATGGCGATGCCCAAGTTCGCTGCTCTCTTGCTCTTGGCTCTCATTGCCATTTCCATGCTTCAGACTGCTGTCATGGCCGGCAGGGGTGGTCGAAACAGGAACCCATATGGACCAGGAAGTGTCAAAGCCTTCCAATGCCCAAATCGATGTGCCACACGGTGTGGAAGAACACAATACCACAAGCCATGCATGTTTTTCTGCCAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCGCCTGGCTACTATGGAAACAAAGCCGTTTGTCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGACCCAAATGCCCTTAA

Coding sequence (CDS)

ATGGCGATGCCCAAGTTCGCTGCTCTCTTGCTCTTGGCTCTCATTGCCATTTCCATGCTTCAGACTGCTGTCATGGCCGGCAGGGGTGGTCGAAACAGGAACCCATATGGACCAGGAAGTGTCAAAGCCTTCCAATGCCCAAATCGATGTGCCACACGGTGTGGAAGAACACAATACCACAAGCCATGCATGTTTTTCTGCCAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCGCCTGGCTACTATGGAAACAAAGCCGTTTGTCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGACCCAAATGCCCTTAA

Protein sequence

MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP*

Homology

[Close]

BLAST of CsaV3_3G041480 vs. NCBI nr
Match: XP_004147472.1 (gibberellin-regulated protein 4 [Cucumis sativus] >KGN59572.1 hypothetical protein Csa_002031 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 7.5e-57
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60
           MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]

BLAST of CsaV3_3G041480 vs. NCBI nr
Match: XP_038903602.1 (gibberellin-regulated protein 4 [Benincasa hispida])

HSP 1 Score: 224.6 bits (571), Expect = 4.1e-55
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60
           MAMPKFAALLLLALIA+SMLQT VMAG GGRNRNPYGPGSVK+FQCPNRCATRCGRTQYH
Sbjct: 1   MAMPKFAALLLLALIALSMLQTTVMAGSGGRNRNPYGPGSVKSFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]

BLAST of CsaV3_3G041480 vs. NCBI nr
Match: XP_022935665.1 (gibberellin-regulated protein 4-like [Cucurbita moschata] >XP_022983885.1 gibberellin-regulated protein 4 [Cucurbita maxima] >XP_023528273.1 gibberellin-regulated protein 4-like [Cucurbita pepo subsp. pepo] >KAG6580967.1 Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.2 bits (544), Expect = 5.6e-52
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMA--GRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60
           MAM KFAA+LLLALIA SMLQT VMA  GRGGR+RNPYGPGSVK FQCPNRCATRCGRTQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]

BLAST of CsaV3_3G041480 vs. NCBI nr
Match: XP_022933448.1 (gibberellin-regulated protein 4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMA--GRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60
           MAM KFAA+L+L+LIA+SM +T VMA  GRGGRNRNPYGPGSV  +QCP+RCATRCGRTQ
Sbjct: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 108

[Close]

BLAST of CsaV3_3G041480 vs. NCBI nr
Match: KAG6588372.1 (Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMA--GRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60
           MAM KFAA+L+L+LIA+SM +T VMA  GRGGRNRNPYGPGSV  +QCP+RCATRCGRTQ
Sbjct: 58  MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 117

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 118 YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 163

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy Swiss-Prot
Match: P46690 (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana OX=3702 GN=GASA4 PE=1 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-35
Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 6   FAALLLLALIAISMLQTAVMAGRGGR---NRNPYGPGSVKAFQCPNRCATRCGRTQYHKP 65
           + A+ LL LI + MLQT VMA  G     ++  YGPGS+K  QCP+ C  RC +TQYHK 
Sbjct: 5   YGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKA 64

Query: 66  CMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 65  CITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.6e-32
Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 8   ALLLLALIAISMLQTAV---MAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYHKPCM 67
           A L+ + + +++L T V   M+     +   YGPGS+K++QC  +C  RC  T+YHKPCM
Sbjct: 2   AKLITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCM 61

Query: 68  FFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           FFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 62  FFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.4e-27
Identity = 54/97 (55.67%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 8   ALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYHKPCMFFC 67
           AL  L L+ +  +   V A RGG        G +K  QC ++C+ RC  T + KPCMFFC
Sbjct: 9   ALFFLTLLFLLSVSNLVQAARGG--------GKLKPQQCNSKCSFRCSATSHKKPCMFFC 68

Query: 68  QKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
            KCC+KCLCVPPG +GNK  CPCYNNWKTKEG PKCP
Sbjct: 69  LKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy Swiss-Prot
Match: A8MR46 (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-26
Identity = 46/60 (76.67%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 45  QCPNRCATRCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104
           +C  RC  RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy Swiss-Prot
Match: P27057 (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-25
Identity = 49/76 (64.47%), Postives = 52/76 (68.42%), Query Frame = 0


Query: 31  RNRNPYG--PGSVKAFQCPNRCATRCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVC 90
           RN   YG   G +    C  +C  RC +T Y KPCMFFCQKCC KCLCVP G YGNK  C
Sbjct: 37  RNNQLYGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSC 96

Query: 91  PCYNNWKTKEGGPKCP 105
           PCYNNWKTK GGPKCP
Sbjct: 97  PCYNNWKTKRGGPKCP 112

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy TrEMBL
Match: A0A0A0LG20 (Gip1-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G826660 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.6e-57
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60
           MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH
Sbjct: 1   MAMPKFAALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYH 60

Query: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  KPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy TrEMBL
Match: A0A6J1J761 (gibberellin-regulated protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111482365 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.7e-52
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMA--GRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60
           MAM KFAA+LLLALIA SMLQT VMA  GRGGR+RNPYGPGSVK FQCPNRCATRCGRTQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy TrEMBL
Match: A0A6J1FBA5 (gibberellin-regulated protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111442454 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.7e-52
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMA--GRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60
           MAM KFAA+LLLALIA SMLQT VMA  GRGGR+RNPYGPGSVK FQCPNRCATRCGRTQ
Sbjct: 1   MAMAKFAAVLLLALIAFSMLQTTVMAGNGRGGRSRNPYGPGSVKIFQCPNRCATRCGRTQ 60

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 106

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy TrEMBL
Match: A0A6J1F4S2 (gibberellin-regulated protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440860 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MAMPKFAALLLLALIAISMLQTAVMA--GRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQ 60
           MAM KFAA+L+L+LIA+SM +T VMA  GRGGRNRNPYGPGSV  +QCP+RCATRCGRTQ
Sbjct: 3   MAMAKFAAILILSLIALSMFETTVMAGNGRGGRNRNPYGPGSVNIYQCPSRCATRCGRTQ 62

Query: 61  YHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           YHKPCMFFCQKCCRKCLCVPPGYYGNK VCPCYNNWKTKEGGPKCP
Sbjct: 63  YHKPCMFFCQKCCRKCLCVPPGYYGNKGVCPCYNNWKTKEGGPKCP 108

[Close]

BLAST of CsaV3_3G041480 vs. ExPASy TrEMBL
Match: A0A4V6A7Y4 (Gip1-like protein OS=Populus alba OX=43335 GN=D5086_0000179890 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.2e-45
Identity = 87/107 (81.31%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 2   AMPKFAALLLLALIAISMLQTAVMA--GRGG--RNRNPYGPGSVKAFQCPNRCATRCGRT 61
           AM KF A+ LLALIAISMLQT V+A  GRGG  +NRN YGPGS+K+FQCP++C  RC +T
Sbjct: 30  AMAKFVAVFLLALIAISMLQTLVVASHGRGGHHKNRNQYGPGSLKSFQCPSQCTRRCSKT 89

Query: 62  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP
Sbjct: 90  QYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 136

[Close]

BLAST of CsaV3_3G041480 vs. TAIR 10
Match: AT5G15230.1 (GAST1 protein homolog 4 )

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-36
Identity = 66/102 (64.71%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 6   FAALLLLALIAISMLQTAVMAGRGGR---NRNPYGPGSVKAFQCPNRCATRCGRTQYHKP 65
           + A+ LL LI + MLQT VMA  G     ++  YGPGS+K  QCP+ C  RC +TQYHK 
Sbjct: 5   YGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKA 64

Query: 66  CMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           C+ FC KCCRKCLCVPPGYYGNK VC CYNNWKT+EGGPKCP
Sbjct: 65  CITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of CsaV3_3G041480 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 137.9 bits (346), Expect = 4.7e-33
Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 8   ALLLLALIAISMLQTAV---MAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYHKPCM 67
           A L+ + + +++L T V   M+     +   YGPGS+K++QC  +C  RC  T+YHKPCM
Sbjct: 2   AKLITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCM 61

Query: 68  FFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
           FFCQKCC KCLCVPPG YGNK VCPCYNNWKT++GGPKCP
Sbjct: 62  FFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of CsaV3_3G041480 vs. TAIR 10
Match: AT5G15230.2 (GAST1 protein homolog 4 )

HSP 1 Score: 135.2 bits (339), Expect = 3.1e-32
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 36  YGPGSVKAFQCPNRCATRCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWK 95
           YGPGS+K  QCP+ C  RC +TQYHK C+ FC KCCRKCLCVPPGYYGNK VC CYNNWK
Sbjct: 15  YGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWK 74

Query: 96  TKEGGPKCP 105
           T+EGGPKCP
Sbjct: 75  TQEGGPKCP 83

[Close]

BLAST of CsaV3_3G041480 vs. TAIR 10
Match: AT3G02885.1 (GAST1 protein homolog 5 )

HSP 1 Score: 121.3 bits (303), Expect = 4.6e-28
Identity = 54/97 (55.67%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 8   ALLLLALIAISMLQTAVMAGRGGRNRNPYGPGSVKAFQCPNRCATRCGRTQYHKPCMFFC 67
           AL  L L+ +  +   V A RGG        G +K  QC ++C+ RC  T + KPCMFFC
Sbjct: 9   ALFFLTLLFLLSVSNLVQAARGG--------GKLKPQQCNSKCSFRCSATSHKKPCMFFC 68

Query: 68  QKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 105
            KCC+KCLCVPPG +GNK  CPCYNNWKTKEG PKCP
Sbjct: 69  LKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of CsaV3_3G041480 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.7e-27
Identity = 46/60 (76.67%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 45  QCPNRCATRCGRTQYHKPCMFFCQKCCRKCLCVPPGYYGNKAVCPCYNNWKTKEGGPKCP 104
           +C  RC  RC  TQY KPC+FFC KCC KCLCVPPG YGNK VCPCYNNWKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

The following BLAST results are available for this feature:

BLAST of CsaV3_3G041480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147472.1	7.5e-57	100.00	gibberellin-regulated protein 4 [Cucumis sativus] >KGN59572.1 hypothetical prote...	[more]
XP_038903602.1	4.1e-55	96.15	gibberellin-regulated protein 4 [Benincasa hispida]	[more]
XP_022935665.1	5.6e-52	92.45	gibberellin-regulated protein 4-like [Cucurbita moschata] >XP_022983885.1 gibber...	[more]
XP_022933448.1	1.5e-49	85.85	gibberellin-regulated protein 4-like isoform X2 [Cucurbita moschata]	[more]
KAG6588372.1	1.5e-49	85.85	Gibberellin-regulated protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsaV3_3G041480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46690	2.2e-35	64.71	Gibberellin-regulated protein 4 OS=Arabidopsis thaliana OX=3702 GN=GASA4 PE=1 SV...	[more]
Q6NMQ7	6.6e-32	59.00	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV...	[more]
Q84J95	6.4e-27	55.67	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV...	[more]
A8MR46	2.4e-26	76.67	Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 ...	[more]
P27057	1.2e-25	64.47	Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1	[more]

BLAST of CsaV3_3G041480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG20	3.6e-57	100.00	Gip1-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G826660 PE=3 SV=1	[more]
A0A6J1J761	2.7e-52	92.45	gibberellin-regulated protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111482365 PE=3...	[more]
A0A6J1FBA5	2.7e-52	92.45	gibberellin-regulated protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]
A0A6J1F4S2	7.3e-50	85.85	gibberellin-regulated protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A4V6A7Y4	3.2e-45	81.31	Gip1-like protein OS=Populus alba OX=43335 GN=D5086_0000179890 PE=3 SV=1	[more]

BLAST of CsaV3_3G041480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15230.1	1.6e-36	64.71	GAST1 protein homolog 4	[more]
AT1G74670.1	4.7e-33	59.00	Gibberellin-regulated family protein	[more]
AT5G15230.2	3.1e-32	76.81	GAST1 protein homolog 4	[more]
AT3G02885.1	4.6e-28	55.67	GAST1 protein homolog 5	[more]
AT3G10185.1	1.7e-27	76.67	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 45..104 e-value: 2.1E-21 score: 75.8
None	No IPR available	PANTHER	PTHR23201:SF69	GIBBERELLIN-REGULATED FAMILY PROTEIN	coord: 1..104
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G041480.1	CsaV3_3G041480.1	mRNA