
CsaV3_3G041440 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATCAATGCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTGGGGGTTAATAAATTATAAAACCGTTTTAGAATTCTAAACAACTTTCAAAAACGAGAAAAGAAAAAGTAATTGGAAAAACGCATTTTCGTTTTCAGAAAACACACACTTTTCAAAACCCTAAATCCTAATGCCTCTGGAAATCAACAAAGAAATAAGCCCTGAAGATTCATCCATCGTCCTCGCTCCTCTTCCTACTCAAGGTTTTTCAATCTTATTTTACTCTTTACTTTACTTTGTTCTTGTTTTTAGTTTTGATTGTTTCAATTCGATTGTATTCTATAGCATCAATTTCTTCATATGTAATCTCAATGCAGTTTGCTTTGTCCTGTTCCTTTTCATCTTTTTCTTCCTCGCATTATAGCTGACTAGTGGTTTGTTCTTTAACTGGAGATTTGATTCTACTGTTGGCTTAAGTAATTGGTTTGCCAATGTCAATTGCTCTGCTGCAAAACAGGGCATGATTGAACTCCATTGTTGTTGCATTGAACAATGTCATTTGGGATTTTGGGCTGTGACTCCACACTTATATCTTTTAGGAGGAGCTTCTTCCATTTGTCATTGGATCTTGATCATCTTTCGATTGTGGGTTCTGATTCATAATCGTACTCATCTCTATCATCTTTCACTTCCATAACAGATTTTTCGACACTTCTCAATACATCATCATCAAATTCGGTTTCTTCTTCCACATTTTCATGGGGTAGAGACAGTTCTTCAGCTGAAGCATTCATCAGTCTTACTCTTCTTCAAAATCTTCTTCAATTGTATTTTCCAATTCACAAGTAGACTCATTTTGTTTAGATCCAACTTCCCTACCAGATTCTTTTACAATGCTCCTTTTGTGAACAACTACTTCAGTTGGCAGAGAAAATCAATTTCCTCAGCAGAAATCTTCACAAAAGCATCATCTTGGCAAGCTTCATTTGCTTCTTCATCTTCAGAGAAGCATGTCACATCCAAATTAGCATGTGGTGCCTCTATTTCAGTATGATCACCACTCTTATCTCTAACTAGATTTTCTTCAGAAGATTTCAAGGGATCATCAAGAACCATTTCTCTGGTTTCAGACTTCATCTCATTCTTCTCTCGTTCATCAACTTCGATGTCCAAATCTTCATTTAATTTTCTTTCTGGTTCATTGGTTTTCTTTGACGCAGTTTCTAATTCTGCATCCTTCTTCACGGGTCCTGAACAGTTAGGCATATCATCGAACGAAATATGGATAGTAATTGACTCCATTCTCCCCTTTTCCCCTAAACTCAATCTCTCCATGTTCTTGTCCAACAATCTGACGGACCTCCTTGTACTGCAATCTTGCTGCTCTACAGCTTCATTGTTCTGAGTCTTGGTTTGTTTACAGGTTAAGGCCCCCACAACACTACTGGCTTTTAGGCACAGCTGACGTTTTTCTATTTGCATTATTTTCTTGATCCCGATCATTGTTCTTTTACTGATCATCAACCATCATCTGAAAATCCACTTTCTTGCAAGCTGAAGAAGCTGCCACTGTCCTTCTCCAGCCACCTGGAAAGGACAGAGTAGTCGAAGCCACAATTAGATCTCTGTTTTCTGATTCCCTTGTGTCTCTTGCTTCTGCAGCAGAACGTGTTTGAGTAGTAATTGCAGTAGTAATTGTCTCATCTTCGACTATGACATCCTTTCTTCTTGTCAAAGATATCAATGCAGTTCAGGTATTTCCAAGGAAACCTATGCTTCCATCGGGGATTTAGGTATCCTTGATCTTTTACTGTTAAAAAATTCTTTGATTCTTTCAACGGATGGAAGAGTGTCAGCCATGATGACATTAGTGATATTGGCCGGAATCTTATTCCTCTTGCAGAGTGCTTGGTGCTCTCTTCTTGACAAGGTATTGAAATCCATGGCTGTAGGAAGATAAAGTTTTGTATGGATTGAAGAAATTTTGCACTGCCACAGGAAATGAGGGGATTCCAATTGGAGTTTGGGGACTTGAACCACAGATCGTGGTCGCTAATACACTTGGATGTTAGTTGAGCTATGCTCGCTTTGGCATGTCTTATGATTTCTTAGATGTTTGCTTTCTTTGATCTTGGATGGACCATTATTATCTCTCTTAAATTTTCTGTCAGTAAACTTAGATCTCTTAGTATGGCTATCATATATCTCTTCAAGTTGGAGGTTCAAAACTTCGTACCTTGCTTTATTCGGAAAATTTTTTTGTTAGTAATTGAAACTACTAAGTTTTCTCCCTTCAAAAGTCCTCTTGGTCGTTTGCATCCTGTATGTTAAAATAATTCTAACAGTTCGCAGACAAAGATTATTTCTTATTCTCAATCAAATTTAGGTGGGCGCCTCTATAAATATGTTCCTTTATGCAACCGTTTATATAGATGAAGATACTAAAGTAAGATTGTTATTTTCAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTACTGTTTCAATTACTGTTATTTAATCTTTGTCATTACTCTATGATAAAATAATTTTACCAAGAGCTATAAGTTGGTAAAATTTTGTAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTTTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCAAGAAGGAGAGGATTTGTTAATAATCTTTAATTATTTAACTAACTAATTAGGTTAGATGATGGTTTGTACAATTTTATATAGTTTTAGAAAAAGAAAAACTTATACTTTAACTACTTGTTAAATGTTTTTGGGTTTTATAGTTTATATGTTAGAAAGACTTGGCTCATGCCTCTTTTTTTTTTCCCTTTTACGAGTTTATGATAATTTTTGGATGAAATTGAAACATGTACATTCTTGACATTTTTCTACGTGTTTTGATGAATGAATTTGTGGATATATA ATGCCTCTGGAAATCAACAAAGAAATAAGCCCTGAAGATTCATCCATCGTCCTCGCTCCTCTTCCTACTCAAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTTTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCAAGAAGGAGAGGATTTGTTAATAATCTTTAA ATGCCTCTGGAAATCAACAAAGAAATAAGCCCTGAAGATTCATCCATCGTCCTCGCTCCTCTTCCTACTCAAGGATTCATGAAGATCAATCATATTGAAGATGTTAATCAAATTGATGTATCAAGATTTGATGGGCCTTGGTCATTTAAAAATGAGACAATTTTTATCAATTTGATGGAAGATGAAGTTGCAAAAGGAAATCGTCCAACTACAACCTTTACCAAAACTAGTTGGACTTATATAAAGGAACAACTGTATGTAAAAACAGGATATGCTTATTCTCATGAACAATTGAAAAATAAGTATAACAGTCTTAGACATCGTTACAAAGAATTCAAAAAGTTGTTGAGTGATATTAATGGAAAAGGTTGGGATCCTGTATTGGGAACTATTACTTTAGGAGAGGCGCAGTGGACTAATCTCATTAAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGATGTCCACATTACGGAAAATTGATGGGAATATATGGAGATACAATTGCAACAACAGAGCTTGATGCTCTTCCATCTACAAAACTTTCTTCAGATTCTGAATATGATAATAAAACAGAAAGTGATTCTCCGATGAGCAATGAAGATTGTGGAAATAGTAGAGATGAAAATCAAGGTCAAAGTAGTATGAGCAAGAAATCTAAAAGAAAAAGAGAAGTCCTAAATGATATAATGTCATCTTTCAAGGAAGCTTATGTTGAGAATTTAAAGAGGAGAAATGATATACTTGAAGGAAGACTTTTTGGTTTTCCATCAGGTGAATTTAGCGAAATTTCGTCAAAAGAAAGAGATTATGCTGATGAAGACTTAAACAAATGCATCAAAATTTTAAATAGCATGGTCGATATTGATGATAAAGCCTATACAAAAGTATTGAAACAATTGGTTGCTGACACTACTTGGAGAAAAGCATTTTTGTGTATTCCTGAATCAAGAAGGAGAGGATTTGTTAATAATCTTTAA MPLEINKEISPEDSSIVLAPLPTQGFMKINHIEDVNQIDVSRFDGPWSFKNETIFINLMEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSDINGKGWDPVLGTITLGEAQWTNLIKVNKKAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKLSSDSEYDNKTESDSPMSNEDCGNSRDENQGQSSMSKKSKRKREVLNDIMSSFKEAYVENLKRRNDILEGRLFGFPSGEFSEISSKERDYADEDLNKCIKILNSMVDIDDKAYTKVLKQLVADTTWRKAFLCIPESRRRGFVNNL* Homology
BLAST of CsaV3_3G041440 vs. NCBI nr
Match: KAE8651219.1 (hypothetical protein Csa_000986 [Cucumis sativus]) HSP 1 Score: 656.4 bits (1692), Expect = 1.3e-184 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]) HSP 1 Score: 622.1 bits (1603), Expect = 2.8e-174 Identity = 310/327 (94.80%), Postives = 316/327 (96.64%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. NCBI nr
Match: XP_031738598.1 (L10-interacting MYB domain-containing protein [Cucumis sativus]) HSP 1 Score: 605.9 bits (1561), Expect = 2.1e-169 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161 Identity = 288/301 (95.68%), Postives = 293/301 (97.34%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. NCBI nr
Match: XP_038904552.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]) HSP 1 Score: 547.0 bits (1408), Expect = 1.1e-151 Identity = 273/326 (83.74%), Postives = 292/326 (89.57%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.2e-12 Identity = 68/247 (27.53%), Postives = 115/247 (46.56%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174 Identity = 310/327 (94.80%), Postives = 316/327 (96.64%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 7.6e-162 Identity = 288/301 (95.68%), Postives = 293/301 (97.34%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. ExPASy TrEMBL
Match: A0A5A7UDA1 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007990 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 2.1e-103 Identity = 193/204 (94.61%), Postives = 197/204 (96.57%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. ExPASy TrEMBL
Match: A0A0A0LHR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825110 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 5.6e-64 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 3.1e-46 Identity = 118/294 (40.14%), Postives = 160/294 (54.42%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-13 Identity = 68/247 (27.53%), Postives = 115/247 (46.56%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-13 Identity = 68/247 (27.53%), Postives = 115/247 (46.56%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. TAIR 10
Match: AT3G11310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 575 Blast hits to 342 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 10; Plants - 559; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 4.9e-12 Identity = 41/136 (30.15%), Postives = 64/136 (47.06%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-11 Identity = 70/289 (24.22%), Postives = 124/289 (42.91%), Query Frame = 0
BLAST of CsaV3_3G041440 vs. TAIR 10
Match: AT2G19220.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 443 Blast hits to 267 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 426; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 9.3e-11 Identity = 39/123 (31.71%), Postives = 59/123 (47.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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