
CsaV3_3G041360 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAACTATGAAAAGTCTAAAGAGGTTATTTTGACTAAAGTTGGTAATTATAATAGTGTGTATGGTTGTTATAATCTATACATGGAGTAAGAATAATATGTATATGAAGAAAATATATAGTGCAGATCCCAAAGATCAGCTGAAAGGAAGTTCAAAGACAACATATTCTGATATTCTTCCTGATCCCCAAAGATCAGCTTAAAGGAAGTTCAGAGACTAAATTTTCTGAAGTTGAAGACAGACACCAAAGATCAGCTGAAAAGCAGTTCAAAGACAAAATCTTCCGATATTCTTCAAGATTCCAAGGATAGGCAGCTCAAAGAAAAACACTTCGTGGGCATAGGGTTATGATAGTACTTTTCACGCATACATAAAAAATTTCCTCTTGCATCCATCAGAAACATTTTCGTCAGCCAGTTCTTTTAGGCTCTTTAAACAAAAAAATAGAAAAGATGCATTTAACAATCCTACTACAAACGCCAATATTAGTTGTAATTGTTTCTTAACTAAAGGAACTACTTTAATTATATATGTTAGTCTGAGCTCTGGTCCCCATTTATATTTCATTTCTTCTTTGTAGGTTATAGTACCTCGATATGCAAATTATGCCGGCCTCCAAGATACAAATGTTCGAACAAGATATAAAGTGCACGGACAGGTGCAAGAACTTTTACTTTGAGCTGTAATGTTAAGTTCAATTTTCCAGTATTTTATCACCTATATATGAATTTTTCATCTTGCAGGACCACGAAGTTTCATATTTCCAAACATATGTATATGGAGTGGACTTTGTCTTCATTGACAACAGCATGTTTCACAACAGGGAGCAGAATATATATGGAGGAGGTCGTCTGGTAAGATGATGGCACCTGTTATTTTACCTTCGCAAGTTATCCTTGGGGATCACCTTGGTTTAATAGTTATATTTTTGGTTCAAAGATGATTTCAATCTGATATCGCATGATCCATTTTATTGCCATGTATAATTCACTACGTGACCTTAGTTTATCTTCAATTTCATTGCCTCTAGCCTAATTTTTCTGCATAAATACAATGGTGCCCTATCCAACTTCACTGGAAATACAATATTTTAATTTTTCTTTGGCCTATTATGTTTCTTCATCTTTGAAATATCAGTGATTTGCCTTCTTTCTTCTCGCTACAAATTTCTTAAGGCACTACATTGACATAGTCTTCGCCAAATCTTATTACCCTCCAATTTATCATTAAAGCAATTAATTTATTATCATTTTCAAGTATTCACGTCTTAAATGCTCTTTTGTTCAGGATATATTAAAGGGTACGTATGATACTCTTTTGGCAAGTCAGCAATTGAGGTAATACTGGTGAAAATGTATATCTATTTAGATATGTATATTTATTTGATAGGGAAACAAATTTCATCAATGCAATGGAATATACAATAGTAAGGGACACCCAAGGATGGAGTTAACGAAAATCTCTTTCAATTAGCACAAATATTGGTAAGCAAATAATGACAAATGATGTCTCTTACACCAAGTGGCTGCTTTATTCAAAATGGGCTGTAAATGATCAATGAGGTCTCTCTCCTTTCCACTTTGCAAGGTAATAAACTAGTGATAAGCGGAACACAACTAAAACACACAAGAACTGGGAATGGATTCTGGTTAACAAGCACGAAAGGTTACAATGATAACTCACTTTTTTGTAGTACAGCTAAAAAGCAGATCATATGTTATTTGAAAGTAATGTTTTACTTCATTTTTTCCAGGTTCCCTGGTATGTCTCATGTGGTGGTGTATGCTGTGGAGATGGGAATTTTGTTTTCGTTGCAAATGATTGGCATACTGCATTGTTATCTGTATATTTGAAAGCATATTATAGAGACAATGGTATTATGAAATTTACAAGATCGATCCTCGTAATTCACAACATAGCTCACCAGGTATGTCATATAGTTTGGTGCATTTTATTCAATTCAGTCATAGTTCTTTTCATTGTCAGTGAAGCTCAAACATTTCAATCAACATTTGAGTGGAGGAAGATGGAATTTAGATGAAGTGCATTCGTTGCTCTTGTATGGAAATTTTAAGTAGACGTTCCAACCCTTGATCATGGTTCTCTGGCTGATGATTATTTATTTATTCATTATACACACATTCACACACACATACATATATATTTGGGTTTTAGAAACCAGCCTTTATTGAGAATAAATGAAGGAATACGAAAGAGACTTACAAAACCACTGCTTAAAAAAATAAGAAAACAATGGTTCAATTCAAGGGCAAGACCTAAAGGATAGTTACAAGCTTACAACTATCCTTGGACTCAAATTCCTAAAAACCAACGCCTGTATTTCACCACATTTCTTGATCGTACAGGGCCGGGGACCAGTTGATGATTTTTATCATGTGGATCTTCCAGAACATTATATCGATCATTTCAAGTTGTATGATCCTGTTGGTGGTGAACACTTCAATATCTTTGCAGCTGGTTTAAAGACAGCAGGTCGTGTGGTCACAGTTAGTCATGGATATGCTTGGGAACTTAAAACATCGAGGGAGGCTGGGGTTTATATGGAATAATCAATGAGATTGGCTGGAAGATGATGGGCATTGTGAATGGGATTGATTAAGAAGAGTGGAGTCCAGAATATGAGGCAATTGTGGTTTCTTGAAGAGAATCAAAATAATAGATAGAAATTTTTTAACTTTTTTTATGAGAAGTAAATATTTGGAAAATGTTCTATTTTTGACAATTTTATTAATAAACAAGAAAATTGTAGGAAAAGTAATCATTTACTGTTTAGACAGAAATTCTAATAATTTTGCCTGTAGAACCATCTAAAATACTTCTGACAATAGAAATAAATGTCATTCCTTATATATATGGCAAAGACCACGAGTATTGTCAACACAAAGTAAACAACAAACCTGATTTTTGTGTAAAAGCTAAAGCATAAGTTCAAAATTCATAAATGAGGTTACCTCTATTTATCGATATCAAACTCTTAACAAAAGCAGTAGCAAAGCAACTGGTTGGAAGCTTCAAGCATTGGCTTTTACTATTATTATACGAAATCAATCCTTCTTTGTTGATCTCCATAAAAAGTTCATCCGAGTTCACAATCCACCATGCCTTCTCAATTCCGAAAACAGACCCAATTGTCAATATCTTTGACCATGAAACTCCACCAAATTCATCTTTCCCCATTCGCCACACGTTGAACATTGTATCATATCCTTTATATGGATAAGGAAACACGACAATGGATCCATTAAAAACACCTAAACACTTTGGGCCGTCAGCAATCACATCAAAATCCTCCGGTATCGAAATTTGGCCGAAAACCTCATCGCTCATGTCGAACGTCTCTAGAGTCTCGATACCTTCCTCACTAAGTCCCCACCAGTAACATGTTCCTTCGTGACACATATTAAAACAAGGCTTCCAAAATCTATGACCAAGAAAAGGACTTTCAATTTCTCTCCATCTATCTTTGGTCAAATCATAGATTTCTACTCTTGTTCGGTAATAAAATTCAGGTTCTTTTGCAAAACCCATAAACCTAACCACTTTAAAATCCATAGATTTTGAATCATACCCAAATCCAATAGCCCTCGTAAACGAACTGTAGCTGTCACGAGGATGGAGAATAATCGACGGCGGAAGTTTACGAAACTCTGTAGTCAAGGGATTCCACAAATAAATGTCCCAATGGCAAACGCTGAGGCAAATTAATCCATGAGAATGGCCAATGATTTCTATTGACCGAAAATACTCGTTCAATGAGAAATCGATATCGAAAAAGGACACTGATGAATTGAGTGAGAGAGGTAATTCCAGGAAGGAGAAGGTATTTACCTCTGTGTCCATGCGAGGACACCAGAGAAAAACATGTTTGCGCCGACGAGAATTGGAATAGTGTTTTGCTCCGAATTTATAGTCATTGATCAGTGCATTCCAGGATTTGTTAACGCACTTGAAACGAAGGAGAGATTCCGGCGGAAGTTGGGAGAGAATCTCGATCATCACTTCTTCTGGAAGAATTCCGAGAGAGGCCATTAGAATTTAGACAAGGAAATTTTGGAGAATGATGAGAAATGTGAGCAAACAAAGTAAGCACAATTATAAACATTCGTTCAGCTCCCCTAGCGGAGATTTAGTTAAAAGATTTGTTATTCTTT ATGTCTAACTATGAAAAGTCTAAAGAGGTTATAGTACCTCGATATGCAAATTATGCCGGCCTCCAAGATACAAATGTTCGAACAAGATATAAAGTGCACGGACAGGACCACGAAGTTTCATATTTCCAAACATATGTATATGGAGTGGACTTTGTCTTCATTGACAACAGCATGTTTCACAACAGGGAGCAGAATATATATGGAGGAGGTCGTCTGGTTCCCTGGTATGTCTCATGTGGTGGTGTATGCTGTGGAGATGGGAATTTTGTTTTCGTTGCAAATGATTGGCATACTGCATTGTTATCTGTATATTTGAAAGCATATTATAGAGACAATGGTATTATGAAATTTACAAGATCGATCCTCGTAATTCACAACATAGCTCACCAGGGCCGGGGACCAGTTGATGATTTTTATCATGTGGATCTTCCAGAACATTATATCGATCATTTCAAGTTGTATGATCCTGTTGGTGGTGAACACTTCAATATCTTTGCAGCTGGTTTAAAGACAGCAGGTCGTGTGGTCACAGTTAGTCATGGATATGCTTGGGAACTTAAAACATCGAGGGAGGCTGGGGTTTATATGGAATAA ATGTCTAACTATGAAAAGTCTAAAGAGGTTATAGTACCTCGATATGCAAATTATGCCGGCCTCCAAGATACAAATGTTCGAACAAGATATAAAGTGCACGGACAGGACCACGAAGTTTCATATTTCCAAACATATGTATATGGAGTGGACTTTGTCTTCATTGACAACAGCATGTTTCACAACAGGGAGCAGAATATATATGGAGGAGGTCGTCTGGTTCCCTGGTATGTCTCATGTGGTGGTGTATGCTGTGGAGATGGGAATTTTGTTTTCGTTGCAAATGATTGGCATACTGCATTGTTATCTGTATATTTGAAAGCATATTATAGAGACAATGGTATTATGAAATTTACAAGATCGATCCTCGTAATTCACAACATAGCTCACCAGGGCCGGGGACCAGTTGATGATTTTTATCATGTGGATCTTCCAGAACATTATATCGATCATTTCAAGTTGTATGATCCTGTTGGTGGTGAACACTTCAATATCTTTGCAGCTGGTTTAAAGACAGCAGGTCGTGTGGTCACAGTTAGTCATGGATATGCTTGGGAACTTAAAACATCGAGGGAGGCTGGGGTTTATATGGAATAA MSNYEKSKEVIVPRYANYAGLQDTNVRTRYKVHGQDHEVSYFQTYVYGVDFVFIDNSMFHNREQNIYGGGRLVPWYVSCGGVCCGDGNFVFVANDWHTALLSVYLKAYYRDNGIMKFTRSILVIHNIAHQGRGPVDDFYHVDLPEHYIDHFKLYDPVGGEHFNIFAAGLKTAGRVVTVSHGYAWELKTSREAGVYME* Homology
BLAST of CsaV3_3G041360 vs. NCBI nr
Match: KAE8651216.1 (hypothetical protein Csa_000730 [Cucumis sativus]) HSP 1 Score: 424.5 bits (1090), Expect = 5.1e-115 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. NCBI nr
Match: XP_008443400.1 (PREDICTED: granule-bound starch synthase 2, chloroplastic/amyloplastic [Cucumis melo] >TYK25630.1 granule-bound starch synthase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 352.4 bits (903), Expect = 2.5e-93 Identity = 168/195 (86.15%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. NCBI nr
Match: KAA0053773.1 (granule-bound starch synthase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 352.4 bits (903), Expect = 2.5e-93 Identity = 168/195 (86.15%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. NCBI nr
Match: XP_011652235.1 (granule-bound starch synthase 2, chloroplastic/amyloplastic [Cucumis sativus] >KAE8651213.1 hypothetical protein Csa_002583 [Cucumis sativus]) HSP 1 Score: 348.6 bits (893), Expect = 3.6e-92 Identity = 167/195 (85.64%), Postives = 170/195 (87.18%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. NCBI nr
Match: XP_038903759.1 (granule-bound starch synthase 2, chloroplastic/amyloplastic [Benincasa hispida]) HSP 1 Score: 342.8 bits (878), Expect = 2.0e-90 Identity = 167/195 (85.64%), Postives = 168/195 (86.15%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy Swiss-Prot
Match: Q43847 (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=SS2 PE=1 SV=3) HSP 1 Score: 287.7 bits (735), Expect = 9.8e-77 Identity = 136/196 (69.39%), Postives = 154/196 (78.57%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy Swiss-Prot
Match: Q9MAC8 (Starch synthase 2, chloroplastic/amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SS2 PE=1 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.3e-76 Identity = 135/194 (69.59%), Postives = 150/194 (77.32%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy Swiss-Prot
Match: Q43093 (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum OX=3888 PE=1 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 3.1e-75 Identity = 132/195 (67.69%), Postives = 150/195 (76.92%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy Swiss-Prot
Match: Q6Z2T8 (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SSII-2 PE=2 SV=2) HSP 1 Score: 271.2 bits (692), Expect = 9.5e-72 Identity = 125/194 (64.43%), Postives = 145/194 (74.74%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy Swiss-Prot
Match: P0C586 (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica OX=39946 GN=SSII-3 PE=1 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 8.0e-71 Identity = 126/195 (64.62%), Postives = 148/195 (75.90%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy TrEMBL
Match: A0A5A7UCX8 (Starch synthase, chloroplastic/amyloplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001580 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93 Identity = 168/195 (86.15%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy TrEMBL
Match: A0A5D3DQS9 (Starch synthase, chloroplastic/amyloplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007900 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93 Identity = 168/195 (86.15%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy TrEMBL
Match: A0A1S3B7Z7 (Starch synthase, chloroplastic/amyloplastic OS=Cucumis melo OX=3656 GN=LOC103486994 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93 Identity = 168/195 (86.15%), Postives = 171/195 (87.69%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy TrEMBL
Match: A0A6J1DSW2 (Starch synthase, chloroplastic/amyloplastic OS=Momordica charantia OX=3673 GN=LOC111023621 PE=3 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 4.1e-86 Identity = 156/195 (80.00%), Postives = 165/195 (84.62%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. ExPASy TrEMBL
Match: A0A6J1F6A5 (Starch synthase, chloroplastic/amyloplastic OS=Cucurbita moschata OX=3662 GN=LOC111442471 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83 Identity = 153/194 (78.87%), Postives = 162/194 (83.51%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. TAIR 10
Match: AT3G01180.1 (starch synthase 2 ) HSP 1 Score: 287.3 bits (734), Expect = 9.1e-78 Identity = 135/194 (69.59%), Postives = 150/194 (77.32%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. TAIR 10
Match: AT5G24300.1 (Glycogen/starch synthases, ADP-glucose type ) HSP 1 Score: 115.9 bits (289), Expect = 3.6e-26 Identity = 71/212 (33.49%), Postives = 100/212 (47.17%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. TAIR 10
Match: AT5G24300.2 (Glycogen/starch synthases, ADP-glucose type ) HSP 1 Score: 115.9 bits (289), Expect = 3.6e-26 Identity = 71/212 (33.49%), Postives = 100/212 (47.17%), Query Frame = 0
BLAST of CsaV3_3G041360 vs. TAIR 10
Match: AT1G32900.1 (UDP-Glycosyltransferase superfamily protein ) HSP 1 Score: 101.3 bits (251), Expect = 9.2e-22 Identity = 73/216 (33.80%), Postives = 96/216 (44.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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