CsaV3_3G041240 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G041240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Vesicle transport v-SNARE family protein
Location	chr3: 33660981 .. 33663529 (-)
RNA-Seq Expression	CsaV3_3G041240
Synteny	CsaV3_3G041240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGATGATTGTGCATAAATTCCAATGGAATATTACTAAGATTCGTTTCCCCTTAAATTAATTCTCTCTTTTACCAAAGTCAAGTTCCAACACACGCTTGCTTCCATTTTTGCTCATTCCAATTCCCCCCCACCACACCGACCTACTTCCCCGGCGATTTCTCCAACTTTTGCCGATCAACATCGATATCAGGTTTTTTCTCTTAACTATGTGCAGTGCAAAAGAAAAAGCTTCTTCACCTTTATCAAATTTTCTTTTTCTTCTTCGTCTATCCATTGAATTCTAAAGACGATCACTAACTTCAGCAGCTGCACTCTGGAATTCTCAAGCTCCGGACACCATGAGCGAGGTATTCGAAAGATACGAGCGTCAATACTGCGAACTTTCTGCCAATCTTTTCAGAAAGTGCACCTCCTCCACTGCCCTAGACGGAGGTATCACTTATCACCGTCCAATTCTTCTTTTCTGAGTTTCTATCTTCGTTTTTGTCTTGTAATATGTGTTGAATACTACGATTTTCTTTCTAATTCTGCAGAGCAGAAGAAGCAAAAGCTTTCTGAAATAAAAGGTGGTGTTGATGAAGCGGAATCTCTGGTACTTGTACAAGTTATTGGCACTGATTGAATTGGAATTTTAAACTAAATTATTGGATTGACCTGAACCTTATTGCATTTCCTTAGATTCGGAAAATGAATCTCGATGCGAGGAGTTTGCAGCCCAGTGTTAAGATTGGTCTTCTTGCTAAGCTAAGGGAATATAAATCAGATTTGAACAATCTGAAAAGTGAAGTAAAACGGATTACGTTTGGCAATGTAAATGCAACTGCGCGCGATGAGTTGCTGGAATCTGGATTGGCTGATACCCTCAATGTATGGATTTATTTAGTTGCTTGACCTCTTACAAATTGTTTTCATATGCAGGGGAAGTGATTAATCCTACATTCTGGAAAATGCATATTTACTCTTCTTTTTTGCTTTTATGGACGATTCTTATAATATTTGAAGCTGTTTAGTTGTTTGCGTATGAATAAATTTACGTGACTTTTTTGTTTAACAGAGTTCAAGAAACCATTAGCGGTATAAACTTCTGACAATTGTTCAAATCATTACTTCTTAGTTGTAGTTTTTGCTCATCCATCAAGAATTGAGAACTTGGTCAAGCAATGTATTGGTTGACTGTTGCTTGTAGACTTGTAGTTGTTTGGAAAAGTCTGCGCAATTAGAAGTTATTGAGATAAGGTGTGTGTCGAGAAAGCCGTAGTGAAAAAATTTTATTGAGAGAGAAGTTATTAGGAGAATGCATGTGGAGTGTAATTAAAGAAAGGAAATGTATCATGAGAGGTTGAGTATGAAGTGTTCAAGTAAATTGCATTTGATAAGCCACTTATCAATTGTTTCTTTAAAAGCGCTTCTTTAAGCTTTAGCTTTTTAAAAGTGCTTATAAATTTAGTGAATGGTAGATTAGTAGGAAGCTCTGTTAACCAGTTAAAAGGTGATTTATGCGCTTCAGTTTTTGTATCTGTTTGCTTTATCTTACCTTTCTCTCTGAAATTTGCGGAGCAATCTTCTAACGGCGATGAGGATGAAAACATATTCTTTAGGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGGCAGGATTAAGGATAGTCAAAGAGCTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCTTGGAAGACTTGCATTCACAGAGACAATCGCTTTTGGGTGCTCATGACACGGTAATCCTTCTCATTATGCTGGAAATGGTCAATAAATCTTGCTTTAGTTTGTTTCCTTGTCTTTCCTTTTGTAGTTACTCTCCGGCCTCATCCTTAAATATTTTCTCTGCTTTCAGCATTTCATTAGCCTTAACCTCTTTTTCGACTGCCATTTTGACACCACTTACAATATTGAAATTAGGGAAATTATGAAAATATATCTTCATTCACCTTTTTCGTCAGCACCGAAATGAATATAACAGAATAATGTAATTGTTCCTTTTAAATCTTCGTCTGTTTGCAGCTTCATGGTGTGGACGATAACGTAGGCAGAAGCAAAAGAATTTTAACCAATATGACAAGGAGGATGAACAAAAATAAGTGGACAATTTCCTGCATACTTACCGTTCTTGTTATCGCCATCATTGTGATATTATACTTCAAACTTAAATAGTTAAATACATTCCATGTACAAAGTTAACTTCTTCCCCCTTCTCTTTTTTGGTTGTGAAATAGTTGTTGGGAGATTAGTTGATGGCCATCTTCAACTCCTTGGTTTCTTTGACTCTCACTATTCAGTGGATGTATATGAATCTTCTTTTTCTTTCCTTTTACGTAGAACATGAGATGGGTTTTGTTTTGAATATATTTTATCATTGTTTGTTAGGTGGGTTTTGATTTTTCAAAACATGGATATTAATTCTCCTAGGAGAAAAAATATATCCAACCTGATGTAACTTCTATGAAATATATCAATTACATAACATCCCCACCACCAAGGGTAGAATTGTCTTTTCTT

mRNA sequence

ATGAGCGAGGTATTCGAAAGATACGAGCGTCAATACTGCGAACTTTCTGCCAATCTTTTCAGAAAGTGCACCTCCTCCACTGCCCTAGACGGAGAGCAGAAGAAGCAAAAGCTTTCTGAAATAAAAGGTGGTGTTGATGAAGCGGAATCTCTGATTCGGAAAATGAATCTCGATGCGAGGAGTTTGCAGCCCAGTGTTAAGATTGGTCTTCTTGCTAAGCTAAGGGAATATAAATCAGATTTGAACAATCTGAAAAGTGAAGTAAAACGGATTACGTTTGGCAATGTAAATGCAACTGCGCGCGATGAGTTGCTGGAATCTGGATTGGCTGATACCCTCAATGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGGCAGGATTAAGGATAGTCAAAGAGCTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCTTGGAAGACTTGCATTCACAGAGACAATCGCTTTTGGGTGCTCATGACACGCTTCATGGTGTGGACGATAACGTAGGCAGAAGCAAAAGAATTTTAACCAATATGACAAGGAGGATGAACAAAAATAAGTGGACAATTTCCTGCATACTTACCGTTCTTGTTATCGCCATCATTGTGATATTATACTTCAAACTTAAATAG

Coding sequence (CDS)

ATGAGCGAGGTATTCGAAAGATACGAGCGTCAATACTGCGAACTTTCTGCCAATCTTTTCAGAAAGTGCACCTCCTCCACTGCCCTAGACGGAGAGCAGAAGAAGCAAAAGCTTTCTGAAATAAAAGGTGGTGTTGATGAAGCGGAATCTCTGATTCGGAAAATGAATCTCGATGCGAGGAGTTTGCAGCCCAGTGTTAAGATTGGTCTTCTTGCTAAGCTAAGGGAATATAAATCAGATTTGAACAATCTGAAAAGTGAAGTAAAACGGATTACGTTTGGCAATGTAAATGCAACTGCGCGCGATGAGTTGCTGGAATCTGGATTGGCTGATACCCTCAATGTCTCAGCTGATCAAAGAACTAGACTAATGACCACAACAGAGAGATTAGGCAATATGAGTGGCAGGATTAAGGATAGTCAAAGAGCTATGCTCGAAACTGAAGACCTTGGTGTCTCAATCTTGGAAGACTTGCATTCACAGAGACAATCGCTTTTGGGTGCTCATGACACGCTTCATGGTGTGGACGATAACGTAGGCAGAAGCAAAAGAATTTTAACCAATATGACAAGGAGGATGAACAAAAATAAGTGGACAATTTCCTGCATACTTACCGTTCTTGTTATCGCCATCATTGTGATATTATACTTCAAACTTAAATAG

Protein sequence

MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDARSLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQRTRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK*

Homology

[Close]

BLAST of CsaV3_3G041240 vs. NCBI nr
Match: XP_004136695.1 (vesicle transport v-SNARE 13 [Cucumis sativus] >XP_011652229.1 vesicle transport v-SNARE 13 [Cucumis sativus] >KGN59550.1 hypothetical protein Csa_002122 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 4.5e-112
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR
Sbjct: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. NCBI nr
Match: XP_008443391.1 (PREDICTED: vesicle transport v-SNARE 13-like [Cucumis melo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 209/220 (95.00%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFERYERQYCELSANL RKCTS+TALDGEQKKQKLSEIKGG+DEAESLIRKM+LDAR
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKI LLA+LREYKSDLNNLKSEVKRIT GNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMS RIKDSQR MLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNMTRRMNKNKWTISC+LTVLVIAII ILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. NCBI nr
Match: XP_038905553.1 (vesicle transport v-SNARE 13-like isoform X1 [Benincasa hispida])

HSP 1 Score: 377.5 bits (968), Expect = 8.0e-101
Identity = 199/220 (90.45%), Postives = 208/220 (94.55%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFE YERQYCELSANL RKC+S++ALDGEQKKQKLSEIK G+DEAESLIRKMNLDAR
Sbjct: 1   MSEVFEGYERQYCELSANLSRKCSSASALDGEQKKQKLSEIKSGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVK  LLAKLREYKSDLNNLKSEV+RI FGN+NA ARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKAVLLAKLREYKSDLNNLKSEVQRINFGNLNAAARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMS RIKDSQR MLETEDLGVSILEDLHSQRQSLL AHDTLHGVDDN+G
Sbjct: 121 TRLMTTTERLGNMSNRIKDSQRTMLETEDLGVSILEDLHSQRQSLLHAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNMTRRMNKNKWTISCI+T LV AII+ILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCIVTALVFAIILILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. NCBI nr
Match: XP_023528169.1 (vesicle transport v-SNARE 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366.7 bits (940), Expect = 1.4e-97
Identity = 194/220 (88.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFE YERQYCELSANLFRKCTS++ALDGEQKKQ LSEI GG+DEAESLIRKMNLDAR
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDGEQKKQTLSEITGGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +LQPSVK  LLAKLREYKSDLNNLK EVKRITFGN+NA AR+ELLESGLADT+ VSADQR
Sbjct: 61  TLQPSVKANLLAKLREYKSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLM+TTERLG  S RIKDSQR MLETEDLGVSILEDLHSQRQ LL AHDTLHGVDDN+G
Sbjct: 121 TRLMSTTERLGKSSDRIKDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNM+RRMNKNKWTI+CI TVLVIAIIVILYFKLK
Sbjct: 181 RSKRILTNMSRRMNKNKWTIACIGTVLVIAIIVILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. NCBI nr
Match: XP_022983870.1 (vesicle transport v-SNARE 13-like [Cucurbita maxima])

HSP 1 Score: 365.5 bits (937), Expect = 3.1e-97
Identity = 193/220 (87.73%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFE YERQYCELSANLFRKCTS++ALDGEQKKQ LSEI GG+DEAESLIRKMNLDAR
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDGEQKKQTLSEITGGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +LQPSVK  LLAKLREYKSDLNNLK EVKRITFGN+NA AR+ELLESGLADT+ VSADQR
Sbjct: 61  TLQPSVKANLLAKLREYKSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLM+TTERLG  S RIKDSQR MLETEDLGVSILEDLHSQRQ LL AHDTLHGVDDN+G
Sbjct: 121 TRLMSTTERLGKSSDRIKDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNM+RRMNKNKWTI+CI T+LVIAIIVILYFKLK
Sbjct: 181 RSKRILTNMSRRMNKNKWTIACIGTLLVIAIIVILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.0e-86
Identity = 164/219 (74.89%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MS+ FERYERQYCE+SANL +KCTS+ ALDGEQKKQ LSEIK GV+EAE+L++KM+L+AR
Sbjct: 1   MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQNLSEIKSGVEEAEALVKKMDLEAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +L P+VK  LL KLREYKSDLNN K+EVKRIT GN+NATARDELLE+G+ADTL  SADQR
Sbjct: 61  NLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           +RLM +T+ LG  + RIKDS+R +LETE+LGVSIL+DLH QRQSLL AH+TLHGVDDNVG
Sbjct: 121 SRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKL 220
           +SK+ILT MTRRMN+NKWTI  I+TVLV+AII ILYFKL
Sbjct: 181 KSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 219

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2)

HSP 1 Score: 303.1 bits (775), Expect = 2.5e-81
Identity = 153/219 (69.86%), Postives = 188/219 (85.84%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MS+VF+ YERQYCELSA+L +KC+S+ +LDGEQKKQKLSEIK G++ AE LIRKM+L+AR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +L P++K  LL KLRE+KSDLNN K+EVKRIT G +NA ARDELLE+G+ADT   SADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
            RLM +TERLG  + R+KDS+R M+ETE++GVSIL+DLH QRQSLL AH+TLHGVDDN+G
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKL 220
           +SK+ILT+MTRRMNKNKWTI  I+  L+ AI +ILYFKL
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3)

HSP 1 Score: 248.4 bits (633), Expect = 7.3e-65
Identity = 130/220 (59.09%), Postives = 174/220 (79.09%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTAL-DGEQKKQKLSEIKGGVDEAESLIRKMNLDA 60
           MS+VFE YERQYCELS NL RKC S++ L +GE+KK K++EIK G+DEA+ LIRKM+L+A
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQ 120
           RSLQPS K   L+KLREYKSDLN LK E KR++  +   ++R+EL+ESG+AD   VSADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RTRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNV 180
           R RL  + ERL   S RI++S+R MLETE++G+SI++DL  QRQ+LL AH+ LHGVDD +
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 GRSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKL 220
            +SK++LT M+RRM +NKW I+ ++  LV+AII+I+ +KL
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-23
Identity = 70/220 (31.82%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MS  FE YE+ +  L+A +  K      L  ++KKQ ++ ++  ++EA  L+ +M+L+ R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
            + P  +     ++R YK ++  L+++ KR           DE+    L D  N S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDAGNSSENQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
             L+  TERL   S R++   +  +ETE +G  +LE+L   R+ +  A D L   D N+G
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           +S RILT M RR+ +N+  +  +  ++VIAI+  + F +K
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVIAILTAIAFFVK 215

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22
Identity = 67/220 (30.45%), Postives = 120/220 (54.55%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MS  FE YE+ +  L+A +  K      L  ++KKQ ++ ++  ++EA+ L+ +M+L+ R
Sbjct: 1   MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
            + P  +     ++R YK ++  L+++ KR           DE+    L D  N S +QR
Sbjct: 61  EIPPQSRGMYSNRMRSYKQEMGKLETDFKR-----SRIAYSDEVRNELLGDDGNSSENQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
             L+  TERL   S R++   +  +ETE +G  +LE+L   R+ +  A + L   D N+G
Sbjct: 121 AHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           +S RILT M RR+ +N+  +  +  ++VI I++ + F ++
Sbjct: 181 KSSRILTGMLRRIIQNRILLVILGIIVVITILMAITFSVR 215

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy TrEMBL
Match: A0A0A0LC29 (V-SNARE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824950 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR
Sbjct: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy TrEMBL
Match: A0A1S3B8M5 (vesicle transport v-SNARE 13-like OS=Cucumis melo OX=3656 GN=LOC103486987 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 5.2e-106
Identity = 209/220 (95.00%), Postives = 214/220 (97.27%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFERYERQYCELSANL RKCTS+TALDGEQKKQKLSEIKGG+DEAESLIRKM+LDAR
Sbjct: 1   MSEVFERYERQYCELSANLSRKCTSATALDGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVKI LLA+LREYKSDLNNLKSEVKRIT GNVNATARDELLESGLADTLNVSADQR
Sbjct: 61  SLQPSVKIVLLARLREYKSDLNNLKSEVKRITSGNVNATARDELLESGLADTLNVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLGNMS RIKDSQR MLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG
Sbjct: 121 TRLMTTTERLGNMSDRIKDSQRTMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNMTRRMNKNKWTISC+LTVLVIAII ILYFKLK
Sbjct: 181 RSKRILTNMTRRMNKNKWTISCMLTVLVIAIIAILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy TrEMBL
Match: A0A6J1J747 (vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111482354 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 193/220 (87.73%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFE YERQYCELSANLFRKCTS++ALDGEQKKQ LSEI GG+DEAESLIRKMNLDAR
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDGEQKKQTLSEITGGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +LQPSVK  LLAKLREYKSDLNNLK EVKRITFGN+NA AR+ELLESGLADT+ VSADQR
Sbjct: 61  TLQPSVKANLLAKLREYKSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLM+TTERLG  S RIKDSQR MLETEDLGVSILEDLHSQRQ LL AHDTLHGVDDN+G
Sbjct: 121 TRLMSTTERLGKSSDRIKDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNM+RRMNKNKWTI+CI T+LVIAIIVILYFKLK
Sbjct: 181 RSKRILTNMSRRMNKNKWTIACIGTLLVIAIIVILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy TrEMBL
Match: A0A6J1F9S4 (vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111442118 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.8e-97
Identity = 193/220 (87.73%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFE YERQYCELSANLFRKCTS++ALDGEQKKQ LSEI GG+DEAESLIRKMNLDAR
Sbjct: 1   MSEVFEGYERQYCELSANLFRKCTSASALDGEQKKQTLSEITGGIDEAESLIRKMNLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +LQPSVK  LLAKLREYKSDLNNLK EVKRITFGN+NA AR+ELLESGLADT+ VSADQR
Sbjct: 61  TLQPSVKANLLAKLREYKSDLNNLKREVKRITFGNLNAAARNELLESGLADTIAVSADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLM+TTERLG  S RIKDSQR MLETEDLGVSILEDLHSQRQ LL AHDTLHGVDDN+G
Sbjct: 121 TRLMSTTERLGKSSDRIKDSQRTMLETEDLGVSILEDLHSQRQPLLRAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           RSKRILTNM+RRMNK KWTI+CI TVLVIAIIVILYFKLK
Sbjct: 181 RSKRILTNMSRRMNKYKWTIACIGTVLVIAIIVILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. ExPASy TrEMBL
Match: A0A6J1CTL4 (vesicle transport v-SNARE 11-like OS=Momordica charantia OX=3673 GN=LOC111014211 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 189/220 (85.91%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MSEVFE YERQYCELSA+L RKCTS+  L+GEQKKQKLSEIKGG+DEAESLIRKM+LDAR
Sbjct: 1   MSEVFEGYERQYCELSASLSRKCTSAGGLEGEQKKQKLSEIKGGIDEAESLIRKMDLDAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           SLQPSVK  LLAKLREYKSDLNNLKSEVKRI+ GN+NA ARDELLESGLADTL  SADQR
Sbjct: 61  SLQPSVKGILLAKLREYKSDLNNLKSEVKRISSGNLNAAARDELLESGLADTLTASADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           TRLMTTTERLG  S RIKDS+R MLETEDLGVSIL+DLHSQRQSLL AHDTLHGVDDN+G
Sbjct: 121 TRLMTTTERLGKTSDRIKDSRRTMLETEDLGVSILQDLHSQRQSLLHAHDTLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKLK 221
           +SKRILTN++RRMNKNKWTI+CI+ VLVIAIIVILYFKLK
Sbjct: 181 KSKRILTNVSRRMNKNKWTIACIVAVLVIAIIVILYFKLK 220

[Close]

BLAST of CsaV3_3G041240 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 303.1 bits (775), Expect = 1.8e-82
Identity = 153/219 (69.86%), Postives = 188/219 (85.84%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MS+VF+ YERQYCELSA+L +KC+S+ +LDGEQKKQKLSEIK G++ AE LIRKM+L+AR
Sbjct: 1   MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQKLSEIKSGLENAEVLIRKMDLEAR 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +L P++K  LL KLRE+KSDLNN K+EVKRIT G +NA ARDELLE+G+ADT   SADQR
Sbjct: 61  TLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
            RLM +TERLG  + R+KDS+R M+ETE++GVSIL+DLH QRQSLL AH+TLHGVDDN+G
Sbjct: 121 ARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIG 180

Query: 181 RSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKL 220
           +SK+ILT+MTRRMNKNKWTI  I+  L+ AI +ILYFKL
Sbjct: 181 KSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKL 219

[Close]

BLAST of CsaV3_3G041240 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 248.4 bits (633), Expect = 5.2e-66
Identity = 130/220 (59.09%), Postives = 174/220 (79.09%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTAL-DGEQKKQKLSEIKGGVDEAESLIRKMNLDA 60
           MS+VFE YERQYCELS NL RKC S++ L +GE+KK K++EIK G+DEA+ LIRKM+L+A
Sbjct: 1   MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKKGKIAEIKSGIDEADVLIRKMDLEA 60

Query: 61  RSLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQ 120
           RSLQPS K   L+KLREYKSDLN LK E KR++  +   ++R+EL+ESG+AD   VSADQ
Sbjct: 61  RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQ 120

Query: 121 RTRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNV 180
           R RL  + ERL   S RI++S+R MLETE++G+SI++DL  QRQ+LL AH+ LHGVDD +
Sbjct: 121 RGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAI 180

Query: 181 GRSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKL 220
            +SK++LT M+RRM +NKW I+ ++  LV+AII+I+ +KL
Sbjct: 181 DKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKL 220

[Close]

BLAST of CsaV3_3G041240 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 )

HSP 1 Score: 241.5 bits (615), Expect = 6.4e-64
Identity = 124/168 (73.81%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 52  IRKMNLDARSLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLAD 111
           ++KM+L+AR+L P+VK  LL KLREYKSDLNN K+EVKRIT GN+NATARDELLE+G+AD
Sbjct: 26  VKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMAD 85

Query: 112 TLNVSADQRTRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDT 171
           TL  SADQR+RLM +T+ LG  + RIKDS+R +LETE+LGVSIL+DLH QRQSLL AH+T
Sbjct: 86  TLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHET 145

Query: 172 LHGVDDNVGRSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKL 220
           LHGVDDNVG+SK+ILT MTRRMN+NKWTI  I+TVLV+AII ILYFKL
Sbjct: 146 LHGVDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 193

[Close]

BLAST of CsaV3_3G041240 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 )

HSP 1 Score: 238.0 bits (606), Expect = 7.1e-63
Identity = 123/165 (74.55%), Postives = 145/165 (87.88%), Query Frame = 0


Query: 55  MNLDARSLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLN 114
           M+L+AR+L P+VK  LL KLREYKSDLNN K+EVKRIT GN+NATARDELLE+G+ADTL 
Sbjct: 1   MDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLT 60

Query: 115 VSADQRTRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHG 174
            SADQR+RLM +T+ LG  + RIKDS+R +LETE+LGVSIL+DLH QRQSLL AH+TLHG
Sbjct: 61  ASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHG 120

Query: 175 VDDNVGRSKRILTNMTRRMNKNKWTISCILTVLVIAIIVILYFKL 220
           VDDNVG+SK+ILT MTRRMN+NKWTI  I+TVLV+AII ILYFKL
Sbjct: 121 VDDNVGKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 165

[Close]

BLAST of CsaV3_3G041240 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.7e-38
Identity = 90/189 (47.62%), Postives = 127/189 (67.20%), Query Frame = 0


Query: 1   MSEVFERYERQYCELSANLFRKCTSSTALDGEQKKQKLSEIKGGVDEAESLIRKMNLDAR 60
           MS VF  Y++QY ELS NL +KC+ + +L G +KK+KLSEI   ++ AE LI KM+  A 
Sbjct: 1   MSNVFHEYDQQYSELSINLSKKCSLAFSLKGGEKKEKLSEITYDLENAEKLISKMDHAAS 60

Query: 61  SLQPSVKIGLLAKLREYKSDLNNLKSEVKRITFGNVNATARDELLESGLADTLNVSADQR 120
           +L P++K  LL KL+E KS L  L++E+KR T  N+  T R+E+LE+  AD     ADQR
Sbjct: 61  NLPPNIKSILLEKLKESKSSLKRLRNEIKRNTSENLKVTTREEVLEAEKADL----ADQR 120

Query: 121 TRLMTTTERLGNMSGRIKDSQRAMLETEDLGVSILEDLHSQRQSLLGAHDTLHGVDDNVG 180
           +RLM +TE L      IKDSQR +LETE++G+SILE+L  Q++SL  +   LH +DD V 
Sbjct: 121 SRLMKSTEGLVRTREMIKDSQRKLLETENIGISILENLQRQKESLQNSQAMLHEIDDTVK 180

Query: 181 RSKRILTNM 190
            S+ I+ ++
Sbjct: 181 ESRSIVRSI 185

The following BLAST results are available for this feature:

BLAST of CsaV3_3G041240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136695.1	4.5e-112	100.00	vesicle transport v-SNARE 13 [Cucumis sativus] >XP_011652229.1 vesicle transport...	[more]
XP_008443391.1	1.1e-105	95.00	PREDICTED: vesicle transport v-SNARE 13-like [Cucumis melo]	[more]
XP_038905553.1	8.0e-101	90.45	vesicle transport v-SNARE 13-like isoform X1 [Benincasa hispida]	[more]
XP_023528169.1	1.4e-97	88.18	vesicle transport v-SNARE 13-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983870.1	3.1e-97	87.73	vesicle transport v-SNARE 13-like [Cucurbita maxima]	[more]

BLAST of CsaV3_3G041240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVP9	2.0e-86	74.89	Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1	[more]
Q9SEL6	2.5e-81	69.86	Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2	[more]
Q9SEL5	7.3e-65	59.09	Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3	[more]
O89116	2.4e-23	31.82	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus O...	[more]
Q96AJ9	2.0e-22	30.45	Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens O...	[more]

BLAST of CsaV3_3G041240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC29	2.2e-112	100.00	V-SNARE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824950 PE=...	[more]
A0A1S3B8M5	5.2e-106	95.00	vesicle transport v-SNARE 13-like OS=Cucumis melo OX=3656 GN=LOC103486987 PE=3 S...	[more]
A0A6J1J747	1.5e-97	87.73	vesicle transport v-SNARE 13-like OS=Cucurbita maxima OX=3661 GN=LOC111482354 PE...	[more]
A0A6J1F9S4	5.8e-97	87.73	vesicle transport v-SNARE 13-like OS=Cucurbita moschata OX=3662 GN=LOC111442118 ...	[more]
A0A6J1CTL4	1.2e-94	85.91	vesicle transport v-SNARE 11-like OS=Momordica charantia OX=3673 GN=LOC111014211...	[more]

BLAST of CsaV3_3G041240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39510.1	1.8e-82	69.86	Vesicle transport v-SNARE family protein	[more]
AT1G26670.1	5.2e-66	59.09	Vesicle transport v-SNARE family protein	[more]
AT3G29100.1	6.4e-64	73.81	vesicle transport V-snare 13	[more]
AT3G29100.2	7.1e-63	74.55	vesicle transport V-snare 13	[more]
AT5G39630.1	2.7e-38	47.62	Vesicle transport v-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	PFAM	PF12352	V-SNARE_C	coord: 128..193 e-value: 5.2E-22 score: 77.9
None	No IPR available	GENE3D	1.20.5.110		coord: 117..197 e-value: 1.1E-23 score: 85.2
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 1..219
None	No IPR available	PANTHER	PTHR21230:SF67	VESICLE TRANSPORT V-SNARE 13-LIKE	coord: 1..219
None	No IPR available	CDD	cd15862	SNARE_Vti1	coord: 127..188 e-value: 1.60839E-19 score: 76.7988
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 132..189
IPR007705	Vesicle transport v-SNARE, N-terminal	PFAM	PF05008	V-SNARE	coord: 12..90 e-value: 3.2E-21 score: 75.5
IPR038407	Vesicle transport v-SNARE, N-terminal domain superfamily	GENE3D	1.20.58.400		coord: 1..97 e-value: 5.3E-29 score: 102.4
IPR027027	GOSR2/Membrin/Bos1	PIRSF	PIRSF028865	Membrin-2	coord: 1..218 e-value: 1.3E-13 score: 49.2
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 6..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G041240.1	CsaV3_3G041240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity