CsaV3_3G041090 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G041090
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AUGMIN subunit 1
Location	chr3: 33596043 .. 33598815 (+)
RNA-Seq Expression	CsaV3_3G041090
Synteny	CsaV3_3G041090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAGTTAATTGGATGTGCATGCCATCAGGATTTAGAACTTTTTCATGGTATTGCTACTAGGCCTCACAAGAGCCATGCATTTTTTAGGTTAACCTAATCTTATTGTGATTTTAGAAAAACATTGTAATTTTTAAATTAAACAAAATCTCATAAGACTAGTGAATTTTCTGTCAAGAGTCATAGATTCCAACAAAATTCATCAATTTTCTCCATCCATACACATACTATATTCAACTCCACCAAAATCAGAATTTAGTTTTCATATTTTTCAAAATAATAATAATAACAACAACGATAGCGAAGGACAATTTTTAGAAACTATTTTCACTACTCGCCTGCAGATCCGACGGATCATTGGGAGCTGCCACCGATCTTCTTTACTCCAACCTCCGACTTCCATTTTTTTGCTTTTATTTTTTTTGGTTAAGGGATAAAAAATCATCCCATTTTCCGGCCAATTATGAGCGATATAATGTCACCGGCGGTCGATTCCGATTCGAAAATGGGATCAGATCCAACCAGTCGAATTGCCGAAGTGAAAGAGTGGTTGGGATCTGAATTCGGCAGGGCAGGCAAAGAAGTTCCCGATTTTGAATACACCCCTTTTAGCGTCTCTCATTTGCACAATCTCTGCAATCTCTCCCAAGCAAAGACACGCGCCGCCGAGATTCTGGCCAAAGACTTCCGCCTCAAGGCCGCCGAGTACCGCGCCCAAGGTAAAACACTATATCTCTCAGCTTTCGATTGAGATTTGTTATGGGGTTTTGTTTCTTTTGATTGATTTTGTTTTTCGGGCTTTTAGAGGCGAGAATCAGAGAGATTTTGGAGAGCGTAGGGATGGCACAGGAGAATTTACCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCAAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGGTAATGAAATTGAAATCCCTAAATTTCTTGATGAATTTGTGGTTGAAATTTGGTTGAGTGTTTGTTTGATCGAGAGATTGTTAAACAATGTAGCTTTCTGGTTGCAATGGGGGATTTTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGGTTAGTTTTTTTGGAGAAATTTCTTTCTTACCACATTTCTGTGTGTGCTTACAATTTAGTGTTTGGGTTTCGATTGTTATCACTTTGACATGAACGAATAACTTGGTAGAACATTAGCACAGCTAGAAGATGATGTAGCTCCATGTGAAGCTCAAATGGATAATTGGAAGACAAATTTAGCTGTAATGGCTGCCAAGGAGAGGCAGTATATGCAGCAATGTGCCAACTACAAGGTACTTGTGCTCTTTTTGTTTTGCTACCTACTAAAATAAACATGTAGACTGGTGTGCATCTGGATATGAGTTTTTTCATAGCATAGAGACCCAATGGGTGGCCTCATGATTCGGGAATACAGGATGTTTGGAGATGTTCTCCAAGTTTTTGGATGAATTGAAACCCTTCAATGGAACAAAAAAACTCAGGGTCTTGTTTGATAACTATTTTGTTTTTGTTTTTTATAAAAATTAAGCTTGTAAACACCCTTTTCACCTCTAAATTTCTTGCTCCATTATCTATTTTTTACCAATGTTATAAAAGACCAAGTGTAGTTTTCAAAACTGAAAAAAGTACTCTTCGTAGTTGATGACCTAGTTGATTAAGAAAATTGTTTTGAAGCATAGATATATGTTATATTTTATTGATATGTTGTGTCTTATTGATAAATTCTTGTTTCCTATAAAAATAATAATAATATCAAGGTTGTATCGTATTGATATTGATGCTAAAGTTGATGAATCCGAACTCTGTTGTTGAATTATGTTGACATGGAAAAATAAGAAAAATCACATTTCTTCTTCATAACTGCAAGTATAATATCATCATCTCTTTACGAAGTTCTCTGTAGACTTGTCTCCTTCAAAATGTGATTTGATGAAGTATTTTATTTGACAGGCAATGCTTAATCGTGTGGGTTACTCACCAGATATTAGTCATGGGATACTGGTGGAAATGGCTGAGCATAGGAAAGAGTTGGAGAAGAAAACAAAGCCCATGCTTGATACTTTAAGGAGCTACCAAGATCTTCCCCCTGTAATTCATTCCCCTTTACTCATACACTGCCAATTTGTTTTGTGTACAAATAGTTCTTGAACCTTTAACTTCATCAAAAGAGAGTAAAAGGATTGAACTTTGAATTTCTGTCTTAATTACAGGATAAAGCTTTGGCTGCTTTAGCAATTGAGGACAAGAAAAGGCAGTATGCTGCAGCTGAAAAGTATCTTGAAGATGTTCTTCATTCTGCACTCACCACAACACAGTAGCTTCTCTTTGACAGTCTAACGTTATTGGTAAATTGTTGTGTACGTATGTTTGTGTATCAATGTTAGTACAAGATAGTGTTAAAGAGAGGTGCATAGTTGACATATTCAGGATTAAGACTTTAGGAACTGAGTATACTTTGTAACGTTATGATGACATTAGGAGCTTTTGAGTTCCTTAATGAATATAGTTTATTTTTGTTATTGAGAATGTGATATAACACACCAACTAAGAGTGATCTTATTCAATTGGAAACAGCAGAAGCAATACAAGAACGAATTGACGAATTGACGAATTGTCAATTCTTAAACAGAAATTTAGAATAACACAAAACAAAGAAATGATCCTCCCC

mRNA sequence

ATGAGCGATATAATGTCACCGGCGGTCGATTCCGATTCGAAAATGGGATCAGATCCAACCAGTCGAATTGCCGAAGTGAAAGAGTGGTTGGGATCTGAATTCGGCAGGGCAGGCAAAGAAGTTCCCGATTTTGAATACACCCCTTTTAGCGTCTCTCATTTGCACAATCTCTGCAATCTCTCCCAAGCAAAGACACGCGCCGCCGAGATTCTGGCCAAAGACTTCCGCCTCAAGGCCGCCGAGTACCGCGCCCAAGAGGCGAGAATCAGAGAGATTTTGGAGAGCGTAGGGATGGCACAGGAGAATTTACCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCAAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGCTTTCTGGTTGCAATGGGGGATTTTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGAACATTAGCACAGCTAGAAGATGATGTAGCTCCATGTGAAGCTCAAATGGATAATTGGAAGACAAATTTAGCTGTAATGGCTGCCAAGGAGAGGCAGTATATGCAGCAATGTGCCAACTACAAGGCAATGCTTAATCGTGTGGGTTACTCACCAGATATTAGTCATGGGATACTGGTGGAAATGGCTGAGCATAGGAAAGAGTTGGAGAAGAAAACAAAGCCCATGCTTGATACTTTAAGGAGCTACCAAGATCTTCCCCCTGATAAAGCTTTGGCTGCTTTAGCAATTGAGGACAAGAAAAGGCAGTATGCTGCAGCTGAAAAGTATCTTGAAGATGTTCTTCATTCTGCACTCACCACAACACAGTAG

Coding sequence (CDS)

ATGAGCGATATAATGTCACCGGCGGTCGATTCCGATTCGAAAATGGGATCAGATCCAACCAGTCGAATTGCCGAAGTGAAAGAGTGGTTGGGATCTGAATTCGGCAGGGCAGGCAAAGAAGTTCCCGATTTTGAATACACCCCTTTTAGCGTCTCTCATTTGCACAATCTCTGCAATCTCTCCCAAGCAAAGACACGCGCCGCCGAGATTCTGGCCAAAGACTTCCGCCTCAAGGCCGCCGAGTACCGCGCCCAAGAGGCGAGAATCAGAGAGATTTTGGAGAGCGTAGGGATGGCACAGGAGAATTTACCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCAAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGCTTTCTGGTTGCAATGGGGGATTTTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGAACATTAGCACAGCTAGAAGATGATGTAGCTCCATGTGAAGCTCAAATGGATAATTGGAAGACAAATTTAGCTGTAATGGCTGCCAAGGAGAGGCAGTATATGCAGCAATGTGCCAACTACAAGGCAATGCTTAATCGTGTGGGTTACTCACCAGATATTAGTCATGGGATACTGGTGGAAATGGCTGAGCATAGGAAAGAGTTGGAGAAGAAAACAAAGCCCATGCTTGATACTTTAAGGAGCTACCAAGATCTTCCCCCTGATAAAGCTTTGGCTGCTTTAGCAATTGAGGACAAGAAAAGGCAGTATGCTGCAGCTGAAAAGTATCTTGAAGATGTTCTTCATTCTGCACTCACCACAACACAGTAG

Protein sequence

MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQLEDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHRKELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ*

Homology

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BLAST of CsaV3_3G041090 vs. NCBI nr
Match: XP_004136688.2 (AUGMIN subunit 1 isoform X1 [Cucumis sativus] >KGN59535.1 hypothetical protein Csa_002410 [Cucumis sativus])

HSP 1 Score: 568.9 bits (1465), Expect = 2.5e-158
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL
Sbjct: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 297

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BLAST of CsaV3_3G041090 vs. NCBI nr
Match: XP_008455693.1 (PREDICTED: AUGMIN subunit 1 [Cucumis melo] >KAA0062759.1 AUGMIN subunit 1 [Cucumis melo var. makuwa] >TYK08833.1 AUGMIN subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 561.2 bits (1445), Expect = 5.3e-156
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL
Sbjct: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQ ARIREILESVGMAQENLPSNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLPSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQ+A AEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQFAVAEKYLEDVLHSALTTTQ 297

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BLAST of CsaV3_3G041090 vs. NCBI nr
Match: XP_011653766.1 (AUGMIN subunit 1 [Cucumis sativus] >XP_031740793.1 AUGMIN subunit 1 [Cucumis sativus] >KGN54519.1 hypothetical protein Csa_012796 [Cucumis sativus])

HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDIMSPAVDSDSK+GSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL
Sbjct: 1   MSDIMSPAVDSDSKLGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQ ARIREILESVGMAQENL SNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLSSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 297

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BLAST of CsaV3_3G041090 vs. NCBI nr
Match: XP_038887451.1 (AUGMIN subunit 1-like [Benincasa hispida])

HSP 1 Score: 551.2 bits (1419), Expect = 5.4e-153
Identity = 284/297 (95.62%), Postives = 292/297 (98.32%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDI+SPAVDSDSK+GSDPTSRIAEVKEWLGSEFGR GKE+PDFEYTPFSVSHLHN C L
Sbjct: 1   MSDIISPAVDSDSKLGSDPTSRIAEVKEWLGSEFGRVGKEIPDFEYTPFSVSHLHNFCTL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQ ARIREILES+GMAQENLPSNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQAARIREILESIGMAQENLPSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGD SLRK+SVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDISLRKVSVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAV+AAKERQYMQQCANYKAMLNRVGYSPDISHGI+VEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVIAAKERQYMQQCANYKAMLNRVGYSPDISHGIMVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKP+LDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPILDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 297

[Close]

BLAST of CsaV3_3G041090 vs. NCBI nr
Match: XP_038880796.1 (AUGMIN subunit 1-like [Benincasa hispida] >XP_038880797.1 AUGMIN subunit 1-like [Benincasa hispida] >XP_038880798.1 AUGMIN subunit 1-like [Benincasa hispida])

HSP 1 Score: 549.7 bits (1415), Expect = 1.6e-152
Identity = 287/297 (96.63%), Postives = 291/297 (97.98%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDI+SPAVDSDSK+GSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNL  L
Sbjct: 1   MSDIISPAVDSDSKLGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLYTL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTR AEILAKDFRLKAAEYRAQ ARIREILESVGMAQENLPSNVVSS QVLA+VANL
Sbjct: 61  SQAKTRTAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLPSNVVSSVQVLASVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LN+RDTELSSFLVAMGD SLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNVRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 297

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy Swiss-Prot
Match: F4IK01 (AUGMIN subunit 1 OS=Arabidopsis thaliana OX=3702 GN=AUG1 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.2e-112
Identity = 221/297 (74.41%), Postives = 250/297 (84.18%), Query Frame = 0


Query: 1   MSDIMSP-AVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCN 60
           MSD+    A  S++K GSD  +RI+EVK WL S+F   GKEVP+FEYT  S++HL+NL  
Sbjct: 1   MSDVTGDLAAVSEAKGGSD-AARISEVKAWLTSQFEAVGKEVPNFEYTHRSITHLYNLAT 60

Query: 61  LSQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVAN 120
            SQAK++AA I+A DFRLKA+EYRAQ ARIREILES GM+QE+LPSNVVSSAQVLANVAN
Sbjct: 61  ASQAKSQAATIVANDFRLKASEYRAQAARIREILESAGMSQESLPSNVVSSAQVLANVAN 120

Query: 121 LLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQ 180
           LLNIRDTELSSFLVAMGD SLRK  VEEKRAK +K+S  LLD+TRKAI RLTYLK+ LAQ
Sbjct: 121 LLNIRDTELSSFLVAMGDISLRKTGVEEKRAKAQKESNALLDYTRKAIQRLTYLKKILAQ 180

Query: 181 LEDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAM-LNRVGYSPDISHGILVEMAE 240
           LEDDV PCE+QM+NWKTNL VMA KE QY+QQ   Y+ M LNRVGY+P ISH  LVEMAE
Sbjct: 181 LEDDVVPCESQMENWKTNLEVMAVKEEQYIQQYKKYEQMLLNRVGYTPKISHRELVEMAE 240

Query: 241 HRKELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTT 296
           HRKEL+K TKP+LDTLRSYQDLPPDKALAALAIEDKKRQ+ AAEKYLE+VL SAL T
Sbjct: 241 HRKELDKMTKPVLDTLRSYQDLPPDKALAALAIEDKKRQFTAAEKYLEEVLQSALET 296

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BLAST of CsaV3_3G041090 vs. ExPASy Swiss-Prot
Match: Q8BHX1 (HAUS augmin-like complex subunit 1 OS=Mus musculus OX=10090 GN=Haus1 PE=1 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 8.2e-19
Identity = 70/268 (26.12%), Postives = 130/268 (48.51%), Query Frame = 0


Query: 19  PTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAKTRAAEILAKDFRLK 78
           P  +  +V EWL   FG     +P +E    +   L++L   ++ + R   ++ +D + K
Sbjct: 4   PEEKALQVAEWLKKVFG--DHPIPQYEMNSRTTEILYHLSERNRVRDRDISLVIEDLKQK 63

Query: 79  AAEYRAQEARIRE-ILESVGMAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD 138
           A+EY ++  R+ + ++ESV  +  NL  +       L + A  L I+DT L+SF+ A+ D
Sbjct: 64  ASEYESEAKRLEDFLMESVNFSPANLSKSGSRFLNALVDSAIALEIKDTSLASFIPAVND 123

Query: 139 FSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQLEDDVAPCEAQMDNWKTN 198
            +      + K  +++ +   L  +    +     L+  L + E  ++  +A++D+   N
Sbjct: 124 LTSDLFRTKSKSEEMKLELGKLEKNLTATLVLEKCLREDLKKAELQLSAEKAKVDSRLQN 183

Query: 199 LAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHRKELEKKTKPMLDTLRSY 258
           +  + AK  ++       +  L+  G    +SH  L  ++E   EL+++T P+   L SY
Sbjct: 184 MDFLKAKAAEFRFGIKAAEEQLSARGMDASLSHRSLAALSEKLSELKEQTIPLKKKLESY 243

Query: 259 QDLPPDKALAALAIEDKKRQYAAAEKYL 286
            DL P  +LA L IE+ KR+  A E  L
Sbjct: 244 LDLMPSPSLAQLKIEEAKRELDAIEAEL 269

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy Swiss-Prot
Match: Q96CS2 (HAUS augmin-like complex subunit 1 OS=Homo sapiens OX=9606 GN=HAUS1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18
Identity = 69/265 (26.04%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 22  RIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAKTRAAEILAKDFRLKAAE 81
           R  +V  WL   FG     +P +E  P +   LH+L   ++ + R   ++ +D + KA+E
Sbjct: 7   RETQVAAWLKKIFG--DHPIPQYEVNPRTTEILHHLSERNRVRDRDVYLVIEDLKQKASE 66

Query: 82  YRAQEARIREIL-ESVGMAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSL 141
           Y ++   ++++L ESV  +  NL S        L + A  L  +DT L+SF+ A+ D + 
Sbjct: 67  YESEAKYLQDLLMESVNFSPANLSSTGSRYLNALVDSAVALETKDTSLASFIPAVNDLTS 126

Query: 142 RKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQLEDDVAPCEAQMDNWKTNLAV 201
                + K  +++ + + L  +    +     L+  + + E  ++   A++DN + N+  
Sbjct: 127 DLFRTKSKSEEIKIELEKLEKNLTATLVLEKCLQEDVKKAELHLSTERAKVDNRRQNMDF 186

Query: 202 MAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHRKELEKKTKPMLDTLRSYQDL 261
           + AK  ++       +  L+  G    +SH  LV ++E    L+++T P+   L SY DL
Sbjct: 187 LKAKSEEFRFGIKAAEEQLSARGMDASLSHQSLVALSEKLARLKQQTIPLKKKLESYLDL 246

Query: 262 PPDKALAALAIEDKKRQYAAAEKYL 286
            P+ +LA + IE+ KR+  + E  L
Sbjct: 247 MPNPSLAQVKIEEAKRELDSIEAEL 269

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy Swiss-Prot
Match: Q2TBK4 (HAUS augmin-like complex subunit 1 OS=Bos taurus OX=9913 GN=HAUS1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.4e-18
Identity = 68/263 (25.86%), Postives = 127/263 (48.29%), Query Frame = 0


Query: 24  AEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAKTRAAEILAKDFRLKAAEYR 83
           A+V  WL   FG     +P +E   ++   L+NL   ++ + R   ++ +D + KA EY 
Sbjct: 9   AQVAAWLKKIFG--DHPIPQYEVNAWTTEILYNLSERNRIRDRDVYLVTEDLKQKAKEYE 68

Query: 84  AQEARIREIL-ESVGMAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRK 143
           ++   ++++L ESV  +  +L S        L + A +L  +DT L+SF+ A+ D +   
Sbjct: 69  SEAKHLQDLLMESVNFSPASLSSTGSRYLNALVDSAVVLETKDTSLASFIPAVNDLTSDL 128

Query: 144 ISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQLEDDVAPCEAQMDNWKTNLAVMA 203
              + K  +++ +   L  +    +     L+  L + E  +    A++D+   N+  + 
Sbjct: 129 FRTKSKNEEIKLELAKLEKNLTATLVLEKCLQEDLKKAELHLCTERARVDSRLQNMDFLK 188

Query: 204 AKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHRKELEKKTKPMLDTLRSYQDLPP 263
           AK  ++       +  L+  G    +SH  LV ++E   EL+++T P+   L SY DL P
Sbjct: 189 AKSEEFRSGIRTAEEQLSARGMDASLSHQSLVALSEKLAELKRQTMPLKKKLESYLDLMP 248

Query: 264 DKALAALAIEDKKRQYAAAEKYL 286
           + +LA + IE+ KR+    E  L
Sbjct: 249 NPSLAQVKIEEAKRELDTIEAEL 269

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy Swiss-Prot
Match: Q9R0A8 (HAUS augmin-like complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Haus1 PE=2 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 67/265 (25.28%), Postives = 129/265 (48.68%), Query Frame = 0


Query: 22  RIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAKTRAAEILAKDFRLKAAE 81
           + ++V EWL   FG     +P +E    +   L++L   ++ + R   ++ +D R KA+E
Sbjct: 7   KASQVAEWLKKIFG--DHPIPQYEMNARTTEILYHLSERNRVRDRDVNLVIEDLRQKASE 66

Query: 82  YRAQEARIRE-ILESVGMAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSL 141
           Y ++  R+ + ++ESV  +  NL +        L + A  L I+DT L+SF+ A+ D + 
Sbjct: 67  YESEAKRLEDFLMESVNFSPANLSNTGSRFLNALVDSAIALEIKDTSLASFIPAVNDLTS 126

Query: 142 RKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQLEDDVAPCEAQMDNWKTNLAV 201
                + K  +++ +   L  +    +     L+  L + +  ++   A+ +    N+  
Sbjct: 127 DLFRTKSKSEEIKLELGKLEKNLTATLVLEKCLREDLKKADVHLSAERAKAEGRLQNMDF 186

Query: 202 MAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHRKELEKKTKPMLDTLRSYQDL 261
           + AK  ++       +  L+  G    +SH  LV +++   EL+++T P+   L SY DL
Sbjct: 187 LKAKAAEFRFGIRAAEEQLSSRGMDASLSHRSLVALSDKLSELKQQTIPLKKKLESYLDL 246

Query: 262 PPDKALAALAIEDKKRQYAAAEKYL 286
            P+ +LA + IE+ KR+  A E  L
Sbjct: 247 MPNPSLAQVKIEEAKRELDAIEAEL 269

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy TrEMBL
Match: A0A0A0LC18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824800 PE=3 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.2e-158
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL
Sbjct: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 297

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy TrEMBL
Match: A0A5A7VAQ7 (AUGMIN subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00160 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.5e-156
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL
Sbjct: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQ ARIREILESVGMAQENLPSNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLPSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQ+A AEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQFAVAEKYLEDVLHSALTTTQ 297

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy TrEMBL
Match: A0A1S3C262 (AUGMIN subunit 1 OS=Cucumis melo OX=3656 GN=LOC103495806 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.5e-156
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL
Sbjct: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQ ARIREILESVGMAQENLPSNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLPSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQ+A AEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQFAVAEKYLEDVLHSALTTTQ 297

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy TrEMBL
Match: A0A0A0L0G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G351120 PE=3 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 5.7e-156
Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSDIMSPAVDSDSK+GSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL
Sbjct: 1   MSDIMSPAVDSDSKLGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQ ARIREILESVGMAQENL SNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLSSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR
Sbjct: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 298
           KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ
Sbjct: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ 297

[Close]

BLAST of CsaV3_3G041090 vs. ExPASy TrEMBL
Match: A0A6J1F3B5 (AUGMIN subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111439403 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 281/296 (94.93%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MSDIMSPAVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNL 60
           MSD++S A DSDSK+GSDPTSRI EVKEWLGSEFGRAGKEVPDFEYTP SVSHLHNLC L
Sbjct: 1   MSDMISQAGDSDSKLGSDPTSRINEVKEWLGSEFGRAGKEVPDFEYTPRSVSHLHNLCTL 60

Query: 61  SQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVANL 120
           SQAKTRAAEILAKDFRLKAAEYRAQ ARIREILESVGMAQENLPSNVVSSAQVLANVANL
Sbjct: 61  SQAKTRAAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLPSNVVSSAQVLANVANL 120

Query: 121 LNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180
           LNIRDTELSSFLVAMGD +LRKISVEEKR KVEKDSKVLLDHTRKAIARLTYLKRTLAQL
Sbjct: 121 LNIRDTELSSFLVAMGDITLRKISVEEKRTKVEKDSKVLLDHTRKAIARLTYLKRTLAQL 180

Query: 181 EDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHR 240
           EDDVAPCE+QMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHG+LVEMAEHR
Sbjct: 181 EDDVAPCESQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGVLVEMAEHR 240

Query: 241 KELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTT 297
           KELEKKTKP+LDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTT
Sbjct: 241 KELEKKTKPILDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTT 296

[Close]

BLAST of CsaV3_3G041090 vs. TAIR 10
Match: AT2G41350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 188 Blast hits to 188 proteins in 66 species: Archae - 0; Bacteria - 12; Metazoa - 90; Fungi - 15; Plants - 54; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-114
Identity = 220/296 (74.32%), Postives = 250/296 (84.46%), Query Frame = 0


Query: 1   MSDIMSP-AVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCN 60
           MSD+    A  S++K GSD  +RI+EVK WL S+F   GKEVP+FEYT  S++HL+NL  
Sbjct: 1   MSDVTGDLAAVSEAKGGSD-AARISEVKAWLTSQFEAVGKEVPNFEYTHRSITHLYNLAT 60

Query: 61  LSQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVAN 120
            SQAK++AA I+A DFRLKA+EYRAQ ARIREILES GM+QE+LPSNVVSSAQVLANVAN
Sbjct: 61  ASQAKSQAATIVANDFRLKASEYRAQAARIREILESAGMSQESLPSNVVSSAQVLANVAN 120

Query: 121 LLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQ 180
           LLNIRDTELSSFLVAMGD SLRK  VEEKRAK +K+S  LLD+TRKAI RLTYLK+ LAQ
Sbjct: 121 LLNIRDTELSSFLVAMGDISLRKTGVEEKRAKAQKESNALLDYTRKAIQRLTYLKKILAQ 180

Query: 181 LEDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEH 240
           LEDDV PCE+QM+NWKTNL VMA KE QY+QQ   Y+ +LNRVGY+P ISH  LVEMAEH
Sbjct: 181 LEDDVVPCESQMENWKTNLEVMAVKEEQYIQQYKKYEMLLNRVGYTPKISHRELVEMAEH 240

Query: 241 RKELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTT 296
           RKEL+K TKP+LDTLRSYQDLPPDKALAALAIEDKKRQ+ AAEKYLE+VL SAL T
Sbjct: 241 RKELDKMTKPVLDTLRSYQDLPPDKALAALAIEDKKRQFTAAEKYLEEVLQSALET 295

[Close]

BLAST of CsaV3_3G041090 vs. TAIR 10
Match: AT2G41350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 406.8 bits (1044), Expect = 1.5e-113
Identity = 221/297 (74.41%), Postives = 250/297 (84.18%), Query Frame = 0


Query: 1   MSDIMSP-AVDSDSKMGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCN 60
           MSD+    A  S++K GSD  +RI+EVK WL S+F   GKEVP+FEYT  S++HL+NL  
Sbjct: 1   MSDVTGDLAAVSEAKGGSD-AARISEVKAWLTSQFEAVGKEVPNFEYTHRSITHLYNLAT 60

Query: 61  LSQAKTRAAEILAKDFRLKAAEYRAQEARIREILESVGMAQENLPSNVVSSAQVLANVAN 120
            SQAK++AA I+A DFRLKA+EYRAQ ARIREILES GM+QE+LPSNVVSSAQVLANVAN
Sbjct: 61  ASQAKSQAATIVANDFRLKASEYRAQAARIREILESAGMSQESLPSNVVSSAQVLANVAN 120

Query: 121 LLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQ 180
           LLNIRDTELSSFLVAMGD SLRK  VEEKRAK +K+S  LLD+TRKAI RLTYLK+ LAQ
Sbjct: 121 LLNIRDTELSSFLVAMGDISLRKTGVEEKRAKAQKESNALLDYTRKAIQRLTYLKKILAQ 180

Query: 181 LEDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAM-LNRVGYSPDISHGILVEMAE 240
           LEDDV PCE+QM+NWKTNL VMA KE QY+QQ   Y+ M LNRVGY+P ISH  LVEMAE
Sbjct: 181 LEDDVVPCESQMENWKTNLEVMAVKEEQYIQQYKKYEQMLLNRVGYTPKISHRELVEMAE 240

Query: 241 HRKELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTT 296
           HRKEL+K TKP+LDTLRSYQDLPPDKALAALAIEDKKRQ+ AAEKYLE+VL SAL T
Sbjct: 241 HRKELDKMTKPVLDTLRSYQDLPPDKALAALAIEDKKRQFTAAEKYLEEVLQSALET 296

[Close]

BLAST of CsaV3_3G041090 vs. TAIR 10
Match: AT2G21980.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41350.1); Has 44 Blast hits to 44 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.0 bits (219), Expect = 7.1e-18
Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = 0


Query: 236 MAEHRKELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSAL 294
           MAEH  ELEK TKP+LD LRSYQDLPPDKALA L  EDKKRQY AAEK LE+VL SAL
Sbjct: 1   MAEHLTELEKMTKPVLDALRSYQDLPPDKALATLEFEDKKRQYEAAEKRLEEVLQSAL 58

The following BLAST results are available for this feature:

BLAST of CsaV3_3G041090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136688.2	2.5e-158	100.00	AUGMIN subunit 1 isoform X1 [Cucumis sativus] >KGN59535.1 hypothetical protein C...	[more]
XP_008455693.1	5.3e-156	98.65	PREDICTED: AUGMIN subunit 1 [Cucumis melo] >KAA0062759.1 AUGMIN subunit 1 [Cucum...	[more]
XP_011653766.1	1.2e-155	98.65	AUGMIN subunit 1 [Cucumis sativus] >XP_031740793.1 AUGMIN subunit 1 [Cucumis sat...	[more]
XP_038887451.1	5.4e-153	95.62	AUGMIN subunit 1-like [Benincasa hispida]	[more]
XP_038880796.1	1.6e-152	96.63	AUGMIN subunit 1-like [Benincasa hispida] >XP_038880797.1 AUGMIN subunit 1-like ...	[more]

BLAST of CsaV3_3G041090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IK01	2.2e-112	74.41	AUGMIN subunit 1 OS=Arabidopsis thaliana OX=3702 GN=AUG1 PE=1 SV=1	[more]
Q8BHX1	8.2e-19	26.12	HAUS augmin-like complex subunit 1 OS=Mus musculus OX=10090 GN=Haus1 PE=1 SV=2	[more]
Q96CS2	1.4e-18	26.04	HAUS augmin-like complex subunit 1 OS=Homo sapiens OX=9606 GN=HAUS1 PE=1 SV=1	[more]
Q2TBK4	2.4e-18	25.86	HAUS augmin-like complex subunit 1 OS=Bos taurus OX=9913 GN=HAUS1 PE=2 SV=1	[more]
Q9R0A8	1.5e-17	25.28	HAUS augmin-like complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Haus1 PE=2 S...	[more]

BLAST of CsaV3_3G041090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC18	1.2e-158	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824800 PE=3 SV=1	[more]
A0A5A7VAQ7	2.5e-156	98.65	AUGMIN subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G0016...	[more]
A0A1S3C262	2.5e-156	98.65	AUGMIN subunit 1 OS=Cucumis melo OX=3656 GN=LOC103495806 PE=3 SV=1	[more]
A0A0A0L0G7	5.7e-156	98.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G351120 PE=3 SV=1	[more]
A0A6J1F3B5	1.4e-149	94.93	AUGMIN subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111439403 PE=3 SV=1	[more]

BLAST of CsaV3_3G041090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41350.1	1.4e-114	74.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G41350.2	1.5e-113	74.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G21980.1	7.1e-18	79.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026243	HAUS augmin-like complex subunit 1	PRINTS	PR02087	HAUSAUGMINL1	coord: 111..131 score: 37.23 coord: 190..207 score: 17.68 coord: 67..89 score: 27.67
IPR026243	HAUS augmin-like complex subunit 1	PANTHER	PTHR31570	HAUS AUGMIN-LIKE COMPLEX SUBUNIT 1	coord: 13..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G041090.1	CsaV3_3G041090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051225	spindle assembly
cellular_component	GO:0070652	HAUS complex