CsaV3_3G041010 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G041010
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Sacchrp_dh_NADP domain-containing protein
Location	chr3: 33554974 .. 33557638 (+)
RNA-Seq Expression	CsaV3_3G041010
Synteny	CsaV3_3G041010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGGATTGGTGGGTTGTGTTGGAGATTCGGAGAGTGTCTTGTGTACAGTTAAGAGTTAGAATCGTGGCGTTGAGTGTCTGACACCGTCGTCCTTATTCTCAGCAAAGAAGAAGAGCTCCAAATCAGGTTGTAGATTCCCCTTGGCTGAAACCCCTCCCCCTCGGTTTCCTTTACAAAAGTTCAAACTTTTTTTTTTTTCTTAAATTTTCATTATAGCTCACGTTTACTTTATATATTTTTAGCTTAAATTATATAAAAAAAATATATATATATATATATATATATTATTTAACTTTGTAACTCATAAAAACCATTAGATTTTTAAAAAGAATTAAAAAATATTCTTACTTTTACAAAGTCATCCATCCATAGAAATACTTTAGTTGATTTCGTTTTTAAGCTAAACTAAACCCTGTATATACATGTACAAATATCTAGTAGAATAAGACAATTGGAACGTAGATATAAAGGTTTTCATGACACAATCAATAATAAACATCATTTTCTATTAGGTTTTGCTTTAACATTATTAGGGACTATTGCTTCATTGGTAGCTCATAACACATGTACACTTATACCTAGCACCTTATGTGTGTATAGCATAAGACTTTAAGATGGGTTATATACCCATCAATAATTTATAATAAGATTAATTACGATGACAGCTCACGTGATCATACATCGTTCTCAAATTAACTTAAAGTGTATTTTCGGTTGATTACTTAATTACAAAATGTATTAAATTGACCATTAAAAAAGTGAAAAATGTTAGGTTTACATAGGATTGTGTTTGAAATACGATAAGAAGCTAAAAAGTTATCGACCAGAGATTAACATGCCAAAAGAAGAAAGCAATAAAAGATAAACAAAAAATCATAAAATACTTTTAATTTTGTTGCAAAAGCAATAATTATTGTTAATAACTAACCAAATGTATTTTTCTCGGATGCAAGAGTCATGACAACTTAGTCTCGCTAATTGAAAGACTATAGACAAGGAAAGCAATATGAAAAGTCTTAAGAATAGCGGTACTTAACATGGTAAAGACAGAAGATGTGTGAACAAAACAATGTGAGATCTAGGGGTATTTTGATAATATATTTTCTTATGACTCATTAATATTATTTATAAAATATATGGTCATGCAAAGAATTATTTCTTTATGGCCTCACGCTACAACTCAATGTAAATGCAAATAATAAAAAATGTAGTTTATAGCCAAAGTGTATATTTACTTCTTTTTTTAATAAAAAATACACAAAAAATTATTCACATATTATGTAATGATTGAAATTTAAATGAAATATGGACAAATATAACAAATTTTTAAATATTTATTAAATATAATTCATATTAATTAAGTTGTTAAGTATTGGACATTTTCTATAAAAAAAATATAATATAATTATGATATTTATTTTATTGAATCAATTGTTTTTATACTAATGATATATTTGTATAGTTGAAATATTCTATTTCACACTTGTATTAAAATAAAAAGTAAATTTTCATTTTAAATTGTAATTAAAATAAAAAATAAAAAAAAATTGGAAAAGGATATTATGATATTTCTAAATTTAGTATTTATTTTTCACTCATATATGAATATGAGAAAGATTTAAACTATTGATAAAGTTAAATTAAAACTAAAATTTTGTTGGTTGTTTACTAGTAATCTTTAAAAGATCATATGTCGTTGATCATATAAACTCTATATATACAAAAACTAAAACATATCCTTTGAATCTTCTTTCCTCATACAACATCGCCAACTCTGTACTCATACCAAGCTCATTTTGAACTGTGTTGAGCCGTTTCGTCGGTATGGGGAGGCAGTGGTTGCGGCATCTGTGGAAACCGGGTGTGATTACTTGGATATATGTGGGGAACCAGAGTTTATGGAGAGAATGGAGGCCGAGTATGACGAGAGGGCGGTTGAGAGTGGGAGTTTGGTGGTTTCTGGATGTGGGTTTGATTCGGTTCCAACGAAATTGGGTTTGATATTCAATTTGAGGCAGTGGGTTGGGAAATCAACGCCGAGTTGGGTTGAAGCATATGTGAATGTGGAGTGTAATGGAGGTATGGCTTATAATTTTGGGACTTACGAATCAACTGTTTTGGATGTGACTAACGTTGATGCGTTGGTTCAATTGAGACAGTCAAGGACCCCTAGACGTCGCTCCAAGGTTAGCAAAATTATTTCTCTCTAACTCATATTACCTACCATCATAAAACATGTGGGATGTAACTAGAATGCTTCCATCTTCTATGCTTTTCAATTTTGTTGCATGATCGTTTGATTTATTTTAAAATTTTCTTTTATTTGTATGGTTAAGAAGAGGATGCATGATAGTTAAGTGCAATCTAGACTACACCTAATCATTAATCTTCAACGATACATCAAATTTAAAATATGTCTTTAGTGAAAATATGATGTTTATAAATATAAATACAGATTTTTGCTATTGGTTTTGAATGATTTAAAAGTATGTTTTTAAAATGACATTAGTCATTTTATGAAGGTTGGTAATTAAACTAAAGAAAATTATCATTTAATAAAAATGGTTTGAGAAATACTTGTGGATTCACTTTGGGTTTGATCCAAATCCAAGCCCAATAGCCTAATGTGTTGTTTATGCAGCTTGGACAAGTCACCTAA

mRNA sequence

ATGGAAGAGGATTGGTGGGTTGTGTTGGAGATTCGGAGAGTGTCTTGTGTACAGTTAAGAGTTAGAATCGTGGCGTTGAGTCTCATTTTGAACTGTGTTGAGCCGTTTCGTCGGTATGGGGAGGCAGTGGTTGCGGCATCTGTGGAAACCGGGTGTGATTACTTGGATATATGTGGGGAACCAGAGTTTATGGAGAGAATGGAGGCCGAGTATGACGAGAGGGCGGTTGAGAGTGGGAGTTTGGTGGTTTCTGGATGTGGGTTTGATTCGGTTCCAACGAAATTGGGTTTGATATTCAATTTGAGGCAGTGGGTTGGGAAATCAACGCCGAGTTGGGTTGAAGCATATGTGAATGTGGAGTGTAATGGAGGTATGGCTTATAATTTTGGGACTTACGAATCAACTGTTTTGGATGTGACTAACGTTGATGCGTTGGTTCAATTGAGACAGTCAAGGACCCCTAGACGTCGCTCCAAGCTTGGACAAGTCACCTAA

Coding sequence (CDS)

ATGGAAGAGGATTGGTGGGTTGTGTTGGAGATTCGGAGAGTGTCTTGTGTACAGTTAAGAGTTAGAATCGTGGCGTTGAGTCTCATTTTGAACTGTGTTGAGCCGTTTCGTCGGTATGGGGAGGCAGTGGTTGCGGCATCTGTGGAAACCGGGTGTGATTACTTGGATATATGTGGGGAACCAGAGTTTATGGAGAGAATGGAGGCCGAGTATGACGAGAGGGCGGTTGAGAGTGGGAGTTTGGTGGTTTCTGGATGTGGGTTTGATTCGGTTCCAACGAAATTGGGTTTGATATTCAATTTGAGGCAGTGGGTTGGGAAATCAACGCCGAGTTGGGTTGAAGCATATGTGAATGTGGAGTGTAATGGAGGTATGGCTTATAATTTTGGGACTTACGAATCAACTGTTTTGGATGTGACTAACGTTGATGCGTTGGTTCAATTGAGACAGTCAAGGACCCCTAGACGTCGCTCCAAGCTTGGACAAGTCACCTAA

Protein sequence

MEEDWWVVLEIRRVSCVQLRVRIVALSLILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQLRQSRTPRRRSKLGQVT*

Homology

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BLAST of CsaV3_3G041010 vs. NCBI nr
Match: KAE8651205.1 (hypothetical protein Csa_002660 [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 2.6e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MEEDWWVVLEIRRVSCVQLRVRIVALSLILNCVEPFRRYGEAVVAASVETGCDYLDICGE 60
           MEEDWWVVLEIRRVSCVQLRVRIVALSLILNCVEPFRRYGEAVVAASVETGCDYLDICGE
Sbjct: 1   MEEDWWVVLEIRRVSCVQLRVRIVALSLILNCVEPFRRYGEAVVAASVETGCDYLDICGE 60

Query: 61  PEFMERMEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVE 120
           PEFMERMEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVE
Sbjct: 61  PEFMERMEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVE 120

Query: 121 CNGGMAYNFGTYESTVLDVTNVDALVQLRQSRTPRRRSKLGQVT 165
           CNGGMAYNFGTYESTVLDVTNVDALVQLRQSRTPRRRSKLGQVT
Sbjct: 121 CNGGMAYNFGTYESTVLDVTNVDALVQLRQSRTPRRRSKLGQVT 164

[Close]

BLAST of CsaV3_3G041010 vs. NCBI nr
Match: XP_008443614.1 (PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucumis melo] >KAA0053797.1 putative mitochondrial saccharopine dehydrogenase-like oxidoreductase [Cucumis melo var. makuwa] >TYK25604.1 putative mitochondrial saccharopine dehydrogenase-like oxidoreductase [Cucumis melo var. makuwa])

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-58
Identity = 112/132 (84.85%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           LILNCV PFRRYGE VVAA VETGCDYLDICGEPEFMERMEA+YD RAVE+GSLVVSGCG
Sbjct: 97  LILNCVGPFRRYGEPVVAACVETGCDYLDICGEPEFMERMEAKYDGRAVETGSLVVSGCG 156

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDS+P +LGLIFNLR WVGKSTPSWVEAYVNVEC+ GM YNFGTYES VL V N DALVQ
Sbjct: 157 FDSIPAELGLIFNLRHWVGKSTPSWVEAYVNVECSEGMTYNFGTYESAVLGVANADALVQ 216

Query: 148 LRQSRTPRRRSK 160
           LR+SR PRRR K
Sbjct: 217 LRRSRPPRRRPK 228

[Close]

BLAST of CsaV3_3G041010 vs. NCBI nr
Match: XP_038905773.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Benincasa hispida])

HSP 1 Score: 218.4 bits (555), Expect = 4.6e-53
Identity = 104/130 (80.00%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           LILNC+ PFRRYGE VVAA VETGCDYLDICGEPEFMERMEAEYD+RAVESGSLVVSGCG
Sbjct: 85  LILNCIGPFRRYGEPVVAACVETGCDYLDICGEPEFMERMEAEYDKRAVESGSLVVSGCG 144

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDSVP +LGLI+N RQWVGKS PSWVEAY+NVE   GM  NFGT+ES VL V N D L Q
Sbjct: 145 FDSVPAELGLIYNSRQWVGKSAPSWVEAYMNVESKKGMVCNFGTFESAVLGVANADQLRQ 204

Query: 148 LRQSRTPRRR 158
            R+SR PRRR
Sbjct: 205 FRRSRPPRRR 214

[Close]

BLAST of CsaV3_3G041010 vs. NCBI nr
Match: XP_022144422.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 4.2e-46
Identity = 95/128 (74.22%), Postives = 105/128 (82.03%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           L+LNCV PFRRYGE VVAA VE GCDYLDICGEPEFMERMEAEY ERAVESGSLVVSGCG
Sbjct: 96  LMLNCVGPFRRYGEPVVAACVEAGCDYLDICGEPEFMERMEAEYHERAVESGSLVVSGCG 155

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDSVP +LG++FN RQWVGKS PS+VEAYV++E    MA NFGT+ES VL V N   L +
Sbjct: 156 FDSVPAELGVMFNSRQWVGKSAPSFVEAYVSLESRRRMAVNFGTFESAVLGVANATKLQK 215

Query: 148 LRQSRTPR 156
           LR+S   R
Sbjct: 216 LRRSSPSR 223

[Close]

BLAST of CsaV3_3G041010 vs. NCBI nr
Match: XP_022969659.1 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Cucurbita maxima])

HSP 1 Score: 192.6 bits (488), Expect = 2.7e-45
Identity = 90/133 (67.67%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           LILNCV PFRRYGE VVAA VETGCDYLDICGEPEFME+MEA+Y ERAVE+GSLV+S CG
Sbjct: 88  LILNCVGPFRRYGEPVVAACVETGCDYLDICGEPEFMEKMEADYHERAVENGSLVISACG 147

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDSVP +LG +FN +QWVG+S P+ +EAY+++E    +  NFGT+ES VL V N D LVQ
Sbjct: 148 FDSVPAELGFMFNSKQWVGESAPNRIEAYLSLESKNKIVGNFGTFESAVLGVANADQLVQ 207

Query: 148 LRQSRTPRRRSKL 161
           LR+SR  R R ++
Sbjct: 208 LRRSRARRPRPRI 220

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy Swiss-Prot
Match: Q8LGI2 (Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana OX=3702 GN=At5g39410 PE=1 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 4.2e-41
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 19  LRVRIVALSLILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVES 78
           LR       LILNCV PFR +G+ VV+A  ++GCDYLDI GEPEFMERMEA Y +RA E+
Sbjct: 85  LRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFMERMEANYHDRAEET 144

Query: 79  GSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLD 138
           GSL+VS CGFDS+P +LGL+FN +QWV  S P+ +EAY+++E +  +A NFGTYES VL 
Sbjct: 145 GSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEAYLSLESDKKIAGNFGTYESAVLG 204

Query: 139 VTNVDALVQLRQSRTPRR 157
           V N + L +LR+SR PRR
Sbjct: 205 VANAEKLKELRRSR-PRR 221

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy Swiss-Prot
Match: Q8R127 (Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus OX=10090 GN=Sccpdh PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-20
Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           L+LNCV P+R YGE VV A +E G   +DICGEP+F+E M A+Y E+A E G  ++   G
Sbjct: 94  LVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFLELMHAKYHEKAAEKGVYIIGSSG 153

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECN-GGMAYNFGTYESTVLDVTNVDALV 147
           FDS+P  LG+++   Q  G  T   VE+++ +     G+  + GT++S +    +  +L 
Sbjct: 154 FDSIPADLGVLYTRNQMNGTLTA--VESFLTINTGPEGLCIHDGTWKSAIYGFGDKGSLR 213

Query: 148 QLR 150
           +LR
Sbjct: 214 KLR 214

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy Swiss-Prot
Match: Q6AY30 (Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=Sccpdh PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.1e-20
Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 27  SLILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGC 86
           +L+LNCV P+R YGE VV A +E G   +DICGEP+F+E M  +Y E+A E G  ++   
Sbjct: 93  TLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFLELMHVKYHEKAAEKGVYIIGSS 152

Query: 87  GFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECN-GGMAYNFGTYESTVLDVTNVDAL 146
           GFDS+P  LG+++   Q  G  T   VE+++ +     G+  + GT++S +    +  +L
Sbjct: 153 GFDSIPADLGVLYTRNQMNGTLTA--VESFLTINSGPEGLCIHDGTWKSAIYGFGDKGSL 212

Query: 147 VQLR 150
            +LR
Sbjct: 213 RKLR 214

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy Swiss-Prot
Match: Q9GZE9 (Lipid droplet localized protein OS=Caenorhabditis elegans OX=6239 GN=ldp-1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-19
Identity = 50/133 (37.59%), Postives = 84/133 (63.16%), Query Frame = 0


Query: 27  SLILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGC 86
           ++++N V P+R YGEAVV A+VE G  ++DI GEP ++E+M+ +Y ++A E G  VVS C
Sbjct: 83  NVVINAVGPYRLYGEAVVKAAVENGASHVDISGEPAWIEKMQQKYSKQAKEQGVYVVSAC 142

Query: 87  GFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECN-GGMAYNFGTYESTVLDVTN--VD 146
           G+DS+P  LG+ F  + + G    + VE++V +     G ++N GTY++ +L ++    D
Sbjct: 143 GWDSIPADLGVNFLKKNFHGDL--NHVESFVQLLTGPSGYSFNAGTYQTLILGLSGAATD 202

Query: 147 ALVQLRQSRTPRR 157
            L  +R+   P +
Sbjct: 203 KLGAVRKEIMPEK 213

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy Swiss-Prot
Match: Q8NBX0 (Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens OX=9606 GN=SCCPDH PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.9e-18
Identity = 44/124 (35.48%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 27  SLILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGC 86
           +++LNCV P+R YGE V+ A +E G   +DI GEP+F+E M+ +Y E+A + G  ++   
Sbjct: 93  TVVLNCVGPYRFYGEPVIKACIENGASCIDISGEPQFLELMQLKYHEKAADKGVYIIGSS 152

Query: 87  GFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECN-GGMAYNFGTYESTVLDVTNVDAL 146
           GFDS+P  LG+I+   +  G  T   VE+++ +     G++ + GT++S +    +   L
Sbjct: 153 GFDSIPADLGVIYTRNKMNGTLTA--VESFLTIHSGPEGLSIHDGTWKSAIYGFGDQSNL 212

Query: 147 VQLR 150
            +LR
Sbjct: 213 RKLR 214

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy TrEMBL
Match: A0A5D3DPV4 (Putative mitochondrial saccharopine dehydrogenase-like oxidoreductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007630 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 112/132 (84.85%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           LILNCV PFRRYGE VVAA VETGCDYLDICGEPEFMERMEA+YD RAVE+GSLVVSGCG
Sbjct: 97  LILNCVGPFRRYGEPVVAACVETGCDYLDICGEPEFMERMEAKYDGRAVETGSLVVSGCG 156

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDS+P +LGLIFNLR WVGKSTPSWVEAYVNVEC+ GM YNFGTYES VL V N DALVQ
Sbjct: 157 FDSIPAELGLIFNLRHWVGKSTPSWVEAYVNVECSEGMTYNFGTYESAVLGVANADALVQ 216

Query: 148 LRQSRTPRRRSK 160
           LR+SR PRRR K
Sbjct: 217 LRRSRPPRRRPK 228

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy TrEMBL
Match: A0A1S3B7Z4 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Cucumis melo OX=3656 GN=LOC103487170 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-58
Identity = 112/132 (84.85%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           LILNCV PFRRYGE VVAA VETGCDYLDICGEPEFMERMEA+YD RAVE+GSLVVSGCG
Sbjct: 97  LILNCVGPFRRYGEPVVAACVETGCDYLDICGEPEFMERMEAKYDGRAVETGSLVVSGCG 156

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDS+P +LGLIFNLR WVGKSTPSWVEAYVNVEC+ GM YNFGTYES VL V N DALVQ
Sbjct: 157 FDSIPAELGLIFNLRHWVGKSTPSWVEAYVNVECSEGMTYNFGTYESAVLGVANADALVQ 216

Query: 148 LRQSRTPRRRSK 160
           LR+SR PRRR K
Sbjct: 217 LRRSRPPRRRPK 228

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy TrEMBL
Match: A0A0A0LG00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824480 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.0e-46
Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 67  MEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMA 126
           MEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMA
Sbjct: 1   MEAEYDERAVESGSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMA 60

Query: 127 YNFGTYESTVLDVTNVDALVQLRQSRTPRRRSKLGQV 164
           YNFGTYESTVLDVTNVDALVQLRQSRTPRRRSK+ ++
Sbjct: 61  YNFGTYESTVLDVTNVDALVQLRQSRTPRRRSKVSKI 97

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy TrEMBL
Match: A0A6J1CTM9 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Momordica charantia OX=3673 GN=LOC111014111 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 2.0e-46
Identity = 95/128 (74.22%), Postives = 105/128 (82.03%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           L+LNCV PFRRYGE VVAA VE GCDYLDICGEPEFMERMEAEY ERAVESGSLVVSGCG
Sbjct: 96  LMLNCVGPFRRYGEPVVAACVEAGCDYLDICGEPEFMERMEAEYHERAVESGSLVVSGCG 155

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDSVP +LG++FN RQWVGKS PS+VEAYV++E    MA NFGT+ES VL V N   L +
Sbjct: 156 FDSVPAELGVMFNSRQWVGKSAPSFVEAYVSLESRRRMAVNFGTFESAVLGVANATKLQK 215

Query: 148 LRQSRTPR 156
           LR+S   R
Sbjct: 216 LRRSSPSR 223

[Close]

BLAST of CsaV3_3G041010 vs. ExPASy TrEMBL
Match: A0A6J1I397 (probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Cucurbita maxima OX=3661 GN=LOC111468612 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45
Identity = 90/133 (67.67%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 28  LILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVESGSLVVSGCG 87
           LILNCV PFRRYGE VVAA VETGCDYLDICGEPEFME+MEA+Y ERAVE+GSLV+S CG
Sbjct: 88  LILNCVGPFRRYGEPVVAACVETGCDYLDICGEPEFMEKMEADYHERAVENGSLVISACG 147

Query: 88  FDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLDVTNVDALVQ 147
           FDSVP +LG +FN +QWVG+S P+ +EAY+++E    +  NFGT+ES VL V N D LVQ
Sbjct: 148 FDSVPAELGFMFNSKQWVGESAPNRIEAYLSLESKNKIVGNFGTFESAVLGVANADQLVQ 207

Query: 148 LRQSRTPRRRSKL 161
           LR+SR  R R ++
Sbjct: 208 LRRSRARRPRPRI 220

[Close]

BLAST of CsaV3_3G041010 vs. TAIR 10
Match: AT5G39410.1 (Saccharopine dehydrogenase )

HSP 1 Score: 169.1 bits (427), Expect = 3.0e-42
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 19  LRVRIVALSLILNCVEPFRRYGEAVVAASVETGCDYLDICGEPEFMERMEAEYDERAVES 78
           LR       LILNCV PFR +G+ VV+A  ++GCDYLDI GEPEFMERMEA Y +RA E+
Sbjct: 85  LRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFMERMEANYHDRAEET 144

Query: 79  GSLVVSGCGFDSVPTKLGLIFNLRQWVGKSTPSWVEAYVNVECNGGMAYNFGTYESTVLD 138
           GSL+VS CGFDS+P +LGL+FN +QWV  S P+ +EAY+++E +  +A NFGTYES VL 
Sbjct: 145 GSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEAYLSLESDKKIAGNFGTYESAVLG 204

Query: 139 VTNVDALVQLRQSRTPRR 157
           V N + L +LR+SR PRR
Sbjct: 205 VANAEKLKELRRSR-PRR 221

The following BLAST results are available for this feature:

BLAST of CsaV3_3G041010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651205.1	2.6e-88	100.00	hypothetical protein Csa_002660 [Cucumis sativus]	[more]
XP_008443614.1	2.1e-58	84.85	PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase...	[more]
XP_038905773.1	4.6e-53	80.00	probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 ...	[more]
XP_022144422.1	4.2e-46	74.22	probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 ...	[more]
XP_022969659.1	2.7e-45	67.67	probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 ...	[more]

BLAST of CsaV3_3G041010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGI2	4.2e-41	59.42	Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 ...	[more]
Q8R127	1.4e-20	39.84	Saccharopine dehydrogenase-like oxidoreductase OS=Mus musculus OX=10090 GN=Sccpd...	[more]
Q6AY30	3.1e-20	38.71	Saccharopine dehydrogenase-like oxidoreductase OS=Rattus norvegicus OX=10116 GN=...	[more]
Q9GZE9	3.5e-19	37.59	Lipid droplet localized protein OS=Caenorhabditis elegans OX=6239 GN=ldp-1 PE=1 ...	[more]
Q8NBX0	3.9e-18	35.48	Saccharopine dehydrogenase-like oxidoreductase OS=Homo sapiens OX=9606 GN=SCCPDH...	[more]

BLAST of CsaV3_3G041010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPV4	1.0e-58	84.85	Putative mitochondrial saccharopine dehydrogenase-like oxidoreductase OS=Cucumis...	[more]
A0A1S3B7Z4	1.0e-58	84.85	probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 ...	[more]
A0A0A0LG00	2.0e-46	95.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824480 PE=4 SV=1	[more]
A0A6J1CTM9	2.0e-46	74.22	probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 ...	[more]
A0A6J1I397	1.3e-45	67.67	probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 ...	[more]

BLAST of CsaV3_3G041010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39410.1	3.0e-42	59.42	Saccharopine dehydrogenase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 17..110 e-value: 5.5E-13 score: 51.0
None	No IPR available	PANTHER	PTHR12286	UNCHARACTERIZED	coord: 20..159
None	No IPR available	PANTHER	PTHR12286:SF9	MITOCHONDRIAL SACCHAROPINE DEHYDROGENASE-LIKE OXIDOREDUCTASE-RELATED	coord: 20..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G041010.1	CsaV3_3G041010.1	mRNA