CsaV3_3G040290 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G040290
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	rRNA-processing protein FCF1 homolog
Location	chr3: 33077893 .. 33082937 (-)
RNA-Seq Expression	CsaV3_3G040290
Synteny	CsaV3_3G040290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATACTTAAAATAATTTAAAAAGTAATAAGATAATAAATATAACAATAGAAAGTGGCAAAACCCTAACCTCCATCATCGTCCTTTACTCTCACGTGCTCCACCACACCTCCTTCTTCTTCTTCTTCACTCCGTCTCTTCCTCTCTTTCAGCAGCTCATTGTCGCCGCCCCCTCTCTCCCGTTCAGTGCTACTGCCGCCGTTTCCGTCGCCGTCTTTCCTCTGCTCGTGTCGTCCCAGCCTCTCTCCAGCAGGTTTTCCCTGATTTCCTAATCTTTCGTCTATTGATTTGTTGCCTATGTCTTTCTATTAAGGCTTTGATAGTCTGAACGTCTCGTTTTTTTCTGCTGGAAATTGCCTTGTTTCTCCGACCATGAATTTTCTAGCATCTCCCTTCTTTATTTATCAGAGGACTAGTCTGAATAGTCTATCCTGTTATGAAATCCTCTTTTAATCCTTAACTTGTAGGAGCAATTTTGATTTACCAAACAACTTCACCCTTGTTTATACTTGTATTATCTGAAGGTTATAATTGGAGTGAAGGGATTTTTTGTTGTTGTTGAAATTGTAGAAAATATTATGGTAAAATGGGCATATGTTAAAAATTGGAAGGATTTAATTTAAGTTTCATGGAAATATTGTGGAGGAACAAAAAAGATTTTTATGGAGAAATTGAGTACATGGGTAATGTAGGAGCCATCACTGTTTCCCCCTCTTGGGAATCCTTAGAGTTACCACTGTTTAGCTTCGGTATCCTCTTTTGAAACAAGGGACGCATCTGTTGAGTGCTTGAAAGAAATTTAGTCTTTTTCACGTTACTTTATCGTCAATATTTTTATATTTGAACTCAATATGTCATATGTGTTAACATGTATGATATGCACGAGTTATGTGGAAAATGGTGCAAATATATTACTTTTTGATTGTGCTGTTGAGATTTTGGGATTCATATAAATGATTGTAAGTTGTTTCCTCGTTACCAATGTTGCAGATAGTGAGCAAGTTCTCTTTTAAGATTTAAAGCATTGAAATTGCATCTGAGAAAGCACAACTTCAATTTTTTACCCTTCAATCAACGAGATGGGGAGGGCCAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCCAAAGCGATTAAAAAGTATACCTTCTGTTGTTTCTTTTCAATTGTCAGCTTTATCTAACTTTTCTTTAAAATCTTATTTGCTTATGTTTATTTTGTTTTGTTACTTATCTTAGCTACAAGGAAGAGGTCTTGAATCCAAAGAGAAAAGATCTAACAAAAGAAAACCTCCCAAGAAATGTGTAAGGAACTTCTTGAGCTGACTATTTTCTACTTTATCTTTCCATAACAAATCAACATTTTCTAACTTTGTTGTCTGGGCATAAGAATTGTTTTCTACTGTTGGTGTTGTCTGTGACAAATGAATACTTATATTTCTGTTAATTCAGTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTACAACACTGCATTGGGGCCACCTTATCGGGTTTTGGTGGATACAAATTTCATCAATTTCTCCATTCAAAACAAGGTGAGTGCTTTACATTTTTAATGAGAATATAGTATATTATCACTGTGTGATTCCTCTGGAAATGTAAAGTCCATTTTGTTATGAATATGTTTGTGGATAATTTGAAAAATATATGTATTTTTTTTTTTGTAAACTAGTGGATTTTCTCTCGTCAAATTTCATATGATGAGAGCACTACATCATGCAGGTAAAATTAAGGATATAATTTCTTTCTACTTGATGATTGAAGTGGTTTTTTCTCTCCTTTCTAATTGCAGTTGGACTTGGAGAAGGGAATGATGGACTGTCTATATGCTAAATGTAAGTCGTACATTGACAGAAAATGTATTAGAATTCAGTATTCGAGAAGTGGTATTCTTTGTGGACATGGATACTTATTTGTGATCATGTTTTAGGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGATTAGGTCAGAAGTATCGCGTTGCTCTGAGGTAAATTTATGTTTCATTTGTCTTTCAGAAGATGAATTATCTATGCACGATTTTGTATTTTTCTTTTCTTGTCCATCTTCAATTTTGTTGTGAAGGGGAAATTCAACCACTCAAAATAATTTGGAATGCCAGCAAAGCATTATTCAAATAGTCGAGTAAAGGTTATGAAAAGTTGAATATTAGGATTGGAAAGAAATAATAGAAGCTTTTAATTTAATTTCATGGGGATATGACTCCACAATACCATATTCTTGGTTTTTCCTTGTTCTTTAGATCTGTATATTTTTTAAAGATTACTGCTTGTTTCATTCTTTTGCATCTCTCAAGTTGGTATTATTTACTATTTTTTGGGCTTGAGCAGAATAGCTAAGGACCCACGTTTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCCTTGTTGAAAGGGTGACTCAGGTGAGAACTGAAGGCTTCTTACTTATTATGATGTTCGTTGACCTGATCACAGTTGTTCCAACTTCATATTTAATTTCCAATACATTTATGATTTATCTAGATAACTCTAATACATTTATCTAGATAACTATGTTTTAGATGGTTGACATTCTTAATACTTAAAAGAAATATATTCCTTATTCCTTATATGTAAGGTAAAGTTGGGGGCAACTTGTAATTTTGGAGCGTTCTATTTTGAGCTTTGTTTAGTTAATTTTTCTTCAATATATGCTCAAATCTGGATAATGGATCACTTTTTCTTGAAACGGATATGAGCCTCTTTATTAAATGTACTAATAAAAGAGACTAATCGTCAAAGTACATGAGAATTATACTAAGAGCGAAAAGAGTGATCACAAATAAAAGTACAGACGAATTGAACAAACAAAAACAACACAAGCGAAACCCTGAGCAAAACAGAAGAACAATAAGAACAAAAAAAAACTTAAAAGTTTTTCCACAAGAAGCCCAAAAACAGCTGAAGGTTGCAAACTAAAAACTTCAAAATGGATTGGAGGAGAACACCAAGAGAGAGCAAATTGCCAAGCAGCTTGTTGTTGAAAAAATATGTCTCCTAAGTAGTCCTTAAATCTTTGAGTGAGTGACTGGAACCAGAATATTTGGGAAGAACTTTAAAGGGTTAAAATAATAGAAGCATCCGTCAAACCTCTTGTGATCCACTAACACAGCTCAAACCAAAATAATTCCACATTTCTCAACAATGGTATGGTTTATTATATTTGTATATATTGAACTAGGATAAAAAAAACAATGTATTAAGTTATTGGAGGAATGGGGAACCAGGCTCTCACGTTCTATCAGATAAAGATTATAAGAAAAAAAAAGGATGAATGAGTTGTAAAGTTGAAGTAGAGATGGTGATCTATATCCTGCCTTTTCACCCTGTTTTTTATTATTTTATTATTTTTAACAGAAGCTTTCTTTTTGTGCAGCATAAGTGTTATATCGTTGCTACTTGTGATAGAGATTTGAAGCGTAGAATTCGCAAGGTATAATCGGATCATAATAGTTGGGAACACACAATGTTGGATTTAGATGTAGTAACTCGCCTATTTTCTTGCAGGTTCCTGGCGTACCCATCATGTATATAACTCGGCATCAGTATTCGATTGAGCGGTTGCCTGAGGCAACAATTGGAGGAGGTAGGCTACAACATGTCTAATCCATATAACAAACAATTTTATTTAACTTCTTGTTAGGTCATTCAACCCAAGGATTGAATTCATAAAAGGTGTCCTTTGATTTATCTTTTTTCTAATGTGGTGGTGAAGATGAATGGACACTCTCTGAGAGAGCAAAAGAATGTTACCACCATCTTTTTATTCATTATGCTTTTCATGAGATATACTTCTAGGGAATCATTTGGCCTTTTGACCTTGTTATAGAAAGCACCTTACTTTTGTCCATCTTCCATTTTAGTGGGATATTGTGGCCTCGGTATCTCCAAGCTTAGTGAAGAAAGCTGGAATTTCTTGGCAATAGGTTTATTCAACTAATGGCACATTGGCACTTGGATAGGGAGAAACAAGATTATAGTTTCTAGAATAAGTTGTTGGCATGGGATAAGTTACAGTTTCTCTTTGGGTTCCTATTGCCAAAACTTCCCACCTAGTGAGTTTTGTGGGGAATTTGGAGAGGAATAATAAAACTTGTTGATAGGGTCTGGAAGATGTTTAGTCTTTCGTTGCATTCTGTGTGATGAAATTATTGGAGAGAGCCTCTTTTCTAGTTTCTCTAGTTAGCTCCGTTTTTGTGGGCTTGTAGTTTGCTCCATTCTGAACAAAACTTAGATCAAATAATTGGTCACATTACACAAGTGTTCATTAATTTTGACATTTCAACTATTAAGTAAATTCTTTTGAAATTTGCAAAAGGAAGAATTCCCATGAAAATTATTTTGAGTTAATAATATTGGACATCTGTTTTAATTTTTAAATTTATTGTGAATGCAGCGCCAAGGATGTGATTGTGGGACTTACAATGATGGACAAAAGAAAAAAACAAAATTCTTGAAGAGGTTTTTCCCCTCCACCACCAACCAACTTTCCCCAAGAGAAGATTAAATTAAAAGAAAATATTAGGAGGCCTTGGTATCATGTAAATTTCTTTTGGCTTTAGGATCTGTTTCTTTTTGTTGCCCCTCCTTTCTACAATTATTTGCTTTTCTTTTTACGTCAAGTTAATGTATCCCCTAAAGATGAAAAAAGTGCTTCTCCCTGCTTCTGGTTGTAGAGATGCGTATGAGCATTTGTTGTACTACAACTACTATGGTATTAAATTTTGGTTGATCTGTTGATGTCTCTGTCATAAGGTGTGAACCAAACAATTTTGTTATATCATAAAAAAAACTAATGAAAAAAGAAAACATTATGTAAACTCGATTAATCATGAGAATCACTAGTGTCTTGATAGTTATCTTGCACATTGTTATGTTCACAATGAGAATCACTGCCTATCTTTTTGCATCAGGGGATGTATGAACTGTTGAAATTGAATAAATT

mRNA sequence

ATGGGGAGGGCCAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCCAAAGCGATTAAAAACTACAAGGAAGAGGTCTTGAATCCAAAGAGAAAAGATCTAACAAAAGAAAACCTCCCAAGAAATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTACAACACTGCATTGGGGCCACCTTATCGGGTTTTGGTGGATACAAATTTCATCAATTTCTCCATTCAAAACAAGTTGGACTTGGAGAAGGGAATGATGGACTGTCTATATGCTAAATGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGATTAGGTCAGAAGTATCGCGTTGCTCTGAGAATAGCTAAGGACCCACGTTTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCCTTGTTGAAAGGGTGACTCAGCATAAGTGTTATATCGTTGCTACTTGTGATAGAGATTTGAAGCGTAGAATTCGCAAGGTTCCTGGCGTACCCATCATGTATATAACTCGGCATCAGTATTCGATTGAGCGGTTGCCTGAGGCAACAATTGGAGGAGCGCCAAGGATGTGA

Coding sequence (CDS)

ATGGGGAGGGCCAAGAAAGGACCCAAATTTGCAGTCATGAAGAAGATGGTCACCTCCAAAGCGATTAAAAACTACAAGGAAGAGGTCTTGAATCCAAAGAGAAAAGATCTAACAAAAGAAAACCTCCCAAGAAATGTTCCAAATGTTCCTTCGGCACTTTTCTTCAAGTACAACACTGCATTGGGGCCACCTTATCGGGTTTTGGTGGATACAAATTTCATCAATTTCTCCATTCAAAACAAGTTGGACTTGGAGAAGGGAATGATGGACTGTCTATATGCTAAATGCACTCCTTGTATAACAGACTGCGTGATGGCTGAGCTTGAGCGATTAGGTCAGAAGTATCGCGTTGCTCTGAGAATAGCTAAGGACCCACGTTTTGAGAGACTACCCTGTACTCATAAAGGAACCTATGCTGATGATTGCCTTGTTGAAAGGGTGACTCAGCATAAGTGTTATATCGTTGCTACTTGTGATAGAGATTTGAAGCGTAGAATTCGCAAGGTTCCTGGCGTACCCATCATGTATATAACTCGGCATCAGTATTCGATTGAGCGGTTGCCTGAGGCAACAATTGGAGGAGCGCCAAGGATGTGA

Protein sequence

MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRHQYSIERLPEATIGGAPRM*

Homology

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BLAST of CsaV3_3G040290 vs. NCBI nr
Match: XP_004136642.1 (rRNA-processing protein FCF1 homolog [Cucumis sativus] >KGN59454.1 hypothetical protein Csa_002627 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 7.7e-111
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. NCBI nr
Match: XP_038903189.1 (rRNA-processing protein FCF1 homolog [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 2.2e-110
Identity = 196/198 (98.99%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAVMKKMVTSKAIKNYKE+VLNPKRKDLTKENLPRNVPNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEQVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. NCBI nr
Match: XP_022158778.1 (rRNA-processing protein FCF1 homolog [Momordica charantia] >XP_022158779.1 rRNA-processing protein FCF1 homolog [Momordica charantia])

HSP 1 Score: 407.1 bits (1045), Expect = 8.5e-110
Identity = 195/198 (98.48%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MG+AKKGPKFAVMKKMVTSKAIKNYK+EVLNPK+KDLTKENLPRNVPNVPSALFFKYNTA
Sbjct: 1   MGKAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKKKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. NCBI nr
Match: XP_008443271.1 (PREDICTED: rRNA-processing protein FCF1 homolog [Cucumis melo] >XP_008443272.1 PREDICTED: rRNA-processing protein FCF1 homolog [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 1.9e-109
Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAVMKK+VTSKAIKNYK+EVLNPKRKDLTKENLPRNVPNVPSALFFK+NTA
Sbjct: 1   MGRAKKGPKFAVMKKLVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. NCBI nr
Match: XP_022935178.1 (rRNA-processing protein FCF1 homolog [Cucurbita moschata] >XP_022983875.1 rRNA-processing protein FCF1 homolog [Cucurbita maxima] >XP_022983876.1 rRNA-processing protein FCF1 homolog [Cucurbita maxima] >KAG6580887.1 rRNA-processing protein FCF1-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017645.1 rRNA-processing protein FCF1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405.2 bits (1040), Expect = 3.2e-109
Identity = 192/198 (96.97%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAV+KKM++SKAIKNYKEEVLNPKRKDLTKENLPRN+PNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVVKKMISSKAIKNYKEEVLNPKRKDLTKENLPRNIPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEAT+GGAPRM
Sbjct: 181 QYSIERLPEATMGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy Swiss-Prot
Match: Q32PD0 (rRNA-processing protein FCF1 homolog OS=Bos taurus OX=9913 GN=FCF1 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.4e-76
Identity = 138/199 (69.35%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENL--PRNVPNVPSALFFKYN 60
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 61  TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 120
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQKYRVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVA 120

Query: 121 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYIT 180
           LRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRK+PGVPIMYI+
Sbjct: 121 LRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYIS 180

Query: 181 RHQYSIERLPEATIGGAPR 198
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy Swiss-Prot
Match: Q9Y324 (rRNA-processing protein FCF1 homolog OS=Homo sapiens OX=9606 GN=FCF1 PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.4e-76
Identity = 138/199 (69.35%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENL--PRNVPNVPSALFFKYN 60
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 61  TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 120
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQKYRVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVA 120

Query: 121 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYIT 180
           LRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRK+PGVPIMYI+
Sbjct: 121 LRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYIS 180

Query: 181 RHQYSIERLPEATIGGAPR 198
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy Swiss-Prot
Match: Q5RFQ0 (rRNA-processing protein FCF1 homolog OS=Pongo abelii OX=9601 GN=FCF1 PE=2 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.4e-76
Identity = 138/199 (69.35%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENL--PRNVPNVPSALFFKYN 60
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 61  TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 120
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQKYRVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVA 120

Query: 121 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYIT 180
           LRIAKDPRFERLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRK+PGVPIMYI+
Sbjct: 121 LRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYIS 180

Query: 181 RHQYSIERLPEATIGGAPR 198
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy Swiss-Prot
Match: Q9CTH6 (rRNA-processing protein FCF1 homolog OS=Mus musculus OX=10090 GN=Fcf1 PE=2 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 7.0e-75
Identity = 135/199 (67.84%), Postives = 164/199 (82.41%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENL--PRNVPNVPSALFFKYN 60
           MG+ KK  K+A MK+M++ +  +  +++ L PK+K+    +    R VP  PS LFF+YN
Sbjct: 1   MGKQKKTRKYATMKRMLSLRDERLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYN 60

Query: 61  TALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVA 120
           T LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+E+LGQK+RVA
Sbjct: 61  TQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKFRVA 120

Query: 121 LRIAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYIT 180
           LRIAKDPRF+RLPCTHKGTYADDCLV+RVTQHKCYIVAT DRDLKRRIRK+PGVPIMY++
Sbjct: 121 LRIAKDPRFDRLPCTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYLS 180

Query: 181 RHQYSIERLPEATIGGAPR 198
            H+Y+IER+P+    GAPR
Sbjct: 181 NHRYNIERMPDDY--GAPR 197

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy Swiss-Prot
Match: Q05498 (rRNA-processing protein FCF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF1 PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.6e-64
Identity = 116/189 (61.38%), Postives = 147/189 (77.78%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MG+AKK  KF ++K+ + +K  +  K+   N K K+     L RN+P V SALFF+YN A
Sbjct: 1   MGKAKKTRKFGLVKRTLNTKKDQRLKKNQENIKTKE--DPELTRNIPQVSSALFFQYNQA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           + PPY+VL+DTNFINFSIQ K+D+ +GMMDCL AKC P ITDCVMAELE+LG KYR+AL+
Sbjct: 61  IKPPYQVLIDTNFINFSIQKKVDIVRGMMDCLLAKCNPLITDCVMAELEKLGPKYRIALK 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           +A+DPR +RL C+HKGTYADDCLV RV QHKCYIVAT D  LK+RIRK+PG+P+M +  H
Sbjct: 121 LARDPRIKRLSCSHKGTYADDCLVHRVLQHKCYIVATNDAGLKQRIRKIPGIPLMSVGGH 180

Query: 181 QYSIERLPE 190
            Y IE+LP+
Sbjct: 181 AYVIEKLPD 187

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy TrEMBL
Match: A0A0A0LEW8 (PINc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G821570 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.7e-111
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy TrEMBL
Match: A0A6J1DX25 (rRNA-processing protein FCF1 homolog OS=Momordica charantia OX=3673 GN=LOC111025245 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.1e-110
Identity = 195/198 (98.48%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MG+AKKGPKFAVMKKMVTSKAIKNYK+EVLNPK+KDLTKENLPRNVPNVPSALFFKYNTA
Sbjct: 1   MGKAKKGPKFAVMKKMVTSKAIKNYKQEVLNPKKKDLTKENLPRNVPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy TrEMBL
Match: A0A1S3B8E3 (rRNA-processing protein FCF1 homolog OS=Cucumis melo OX=3656 GN=LOC103486894 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.2e-110
Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAVMKK+VTSKAIKNYK+EVLNPKRKDLTKENLPRNVPNVPSALFFK+NTA
Sbjct: 1   MGRAKKGPKFAVMKKLVTSKAIKNYKQEVLNPKRKDLTKENLPRNVPNVPSALFFKHNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEATIGGAPRM
Sbjct: 181 QYSIERLPEATIGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy TrEMBL
Match: A0A6J1J3K9 (rRNA-processing protein FCF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482358 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109
Identity = 192/198 (96.97%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAV+KKM++SKAIKNYKEEVLNPKRKDLTKENLPRN+PNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVVKKMISSKAIKNYKEEVLNPKRKDLTKENLPRNIPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEAT+GGAPRM
Sbjct: 181 QYSIERLPEATMGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. ExPASy TrEMBL
Match: A0A6J1F9T9 (rRNA-processing protein FCF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111442132 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109
Identity = 192/198 (96.97%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGRAKKGPKFAV+KKM++SKAIKNYKEEVLNPKRKDLTKENLPRN+PNVPSALFFKYNTA
Sbjct: 1   MGRAKKGPKFAVVKKMISSKAIKNYKEEVLNPKRKDLTKENLPRNIPNVPSALFFKYNTA 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR
Sbjct: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRK+PGVPIMYITRH
Sbjct: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKIPGVPIMYITRH 180

Query: 181 QYSIERLPEATIGGAPRM 199
           QYSIERLPEAT+GGAPRM
Sbjct: 181 QYSIERLPEATMGGAPRM 198

[Close]

BLAST of CsaV3_3G040290 vs. TAIR 10
Match: AT2G46230.1 (PIN domain-like family protein )

HSP 1 Score: 344.0 bits (881), Expect = 8.2e-95
Identity = 161/197 (81.73%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MG+AKK  KFAV+KKM++ KA+K+YKEEVLNP +KDLT+  LPRNVP+VP+ LFF YN+ 
Sbjct: 1   MGKAKKPQKFAVVKKMISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPAGLFFSYNST 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCITDCVMAELE+LGQKYRVALR
Sbjct: 61  LVPPYRVLVDTNFINFSIQNKIDLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRK+PGVPIMY+T  
Sbjct: 121 IAKDPHFERLPCIHKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTNR 180

Query: 181 QYSIERLPEATIGGAPR 198
           +YSIE+LPEAT+GGAPR
Sbjct: 181 KYSIEKLPEATLGGAPR 195

[Close]

BLAST of CsaV3_3G040290 vs. TAIR 10
Match: AT2G46230.2 (PIN domain-like family protein )

HSP 1 Score: 293.9 bits (751), Expect = 9.8e-80
Identity = 140/169 (82.84%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MG+AKK  KFAV+KKM++ KA+K+YKEEVLNP +KDLT+  LPRNVP+VP+ LFF YN+ 
Sbjct: 1   MGKAKKPQKFAVVKKMISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPAGLFFSYNST 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           L PPYRVLVDTNFINFSIQNK+DLEKGM DCLYA CTPCITDCVMAELE+LGQKYRVALR
Sbjct: 61  LVPPYRVLVDTNFINFSIQNKIDLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALR 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKV 170
           IAKDP FERLPC HKGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRKV
Sbjct: 121 IAKDPHFERLPCIHKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKV 167

[Close]

BLAST of CsaV3_3G040290 vs. TAIR 10
Match: AT1G26530.1 (PIN domain-like family protein )

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-71
Identity = 135/197 (68.53%), Postives = 156/197 (79.19%), Query Frame = 0


Query: 1   MGRAKKGPKFAVMKKMVTSKAIKNYKEEVLNPKRKDLTKENLPRNVPNVPSALFFKYNTA 60
           MGR KK  KFAVMK M++ KA+K+YKEEVLNP +KDLT+  LPRNVP+VPS LFF +N++
Sbjct: 1   MGRTKKPQKFAVMKMMISHKALKHYKEEVLNPNKKDLTE--LPRNVPSVPSGLFFSHNSS 60

Query: 61  LGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELERLGQKYRVALR 120
           L PPYRVLVDTNFINFSIQNK+DLEKGM                M  + ++   Y     
Sbjct: 61  LVPPYRVLVDTNFINFSIQNKIDLEKGM----------------MVFVRKMHSLYYGL-- 120

Query: 121 IAKDPRFERLPCTHKGTYADDCLVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRH 180
           IAKDPRFERLPC  KGTYADDCLV+RVTQHKC+IVATCDRDLKRRIRK+PGVPIMY+T+ 
Sbjct: 121 IAKDPRFERLPCVLKGTYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTQR 177

Query: 181 QYSIERLPEATIGGAPR 198
           +YSIE+LPEATIGGAPR
Sbjct: 181 KYSIEKLPEATIGGAPR 177

[Close]

BLAST of CsaV3_3G040290 vs. TAIR 10
Match: AT2G34570.1 (PIN domain-like family protein )

HSP 1 Score: 55.8 bits (133), Expect = 4.5e-08
Identity = 39/149 (26.17%), Postives = 73/149 (48.99%), Query Frame = 0


Query: 44  RNVPNVPSALFFKYNTALGPPYRVLVDTNFINFSIQNKL-DLEKGMMDCLYAKCTPCITD 103
           R   N  +  FF        PY+VL D  F++  + N++   +  + + L        T 
Sbjct: 5   RQKKNRRTVRFFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKLFTTR 64

Query: 104 CVMAELERLGQKYRVALRIAKDPRFERLPCTH-KGTYADDCLVERV----TQHKCYIVAT 163
           CV+AELE+LG+ +  +L  A+        C H +   AD+CL E +    T+H  + + T
Sbjct: 65  CVIAELEKLGKDFAESLEAAQ--TLNTATCEHEEAKTADECLSEVIGVQNTEH--FFLGT 124

Query: 164 CDRDLKRRIRKVPGVPIMYITRHQYSIER 187
            D + +R++++   VP+++  R+   I++
Sbjct: 125 QDAEFRRKLQQESIVPLVFGLRNILLIDQ 149

The following BLAST results are available for this feature:

BLAST of CsaV3_3G040290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136642.1	7.7e-111	100.00	rRNA-processing protein FCF1 homolog [Cucumis sativus] >KGN59454.1 hypothetical ...	[more]
XP_038903189.1	2.2e-110	98.99	rRNA-processing protein FCF1 homolog [Benincasa hispida]	[more]
XP_022158778.1	8.5e-110	98.48	rRNA-processing protein FCF1 homolog [Momordica charantia] >XP_022158779.1 rRNA-...	[more]
XP_008443271.1	1.9e-109	97.98	PREDICTED: rRNA-processing protein FCF1 homolog [Cucumis melo] >XP_008443272.1 P...	[more]
XP_022935178.1	3.2e-109	96.97	rRNA-processing protein FCF1 homolog [Cucurbita moschata] >XP_022983875.1 rRNA-p...	[more]

BLAST of CsaV3_3G040290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32PD0	6.4e-76	69.35	rRNA-processing protein FCF1 homolog OS=Bos taurus OX=9913 GN=FCF1 PE=2 SV=1	[more]
Q9Y324	6.4e-76	69.35	rRNA-processing protein FCF1 homolog OS=Homo sapiens OX=9606 GN=FCF1 PE=1 SV=1	[more]
Q5RFQ0	6.4e-76	69.35	rRNA-processing protein FCF1 homolog OS=Pongo abelii OX=9601 GN=FCF1 PE=2 SV=1	[more]
Q9CTH6	7.0e-75	67.84	rRNA-processing protein FCF1 homolog OS=Mus musculus OX=10090 GN=Fcf1 PE=2 SV=2	[more]
Q05498	5.6e-64	61.38	rRNA-processing protein FCF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...	[more]

BLAST of CsaV3_3G040290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEW8	3.7e-111	100.00	PINc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G821570 PE=3 S...	[more]
A0A6J1DX25	4.1e-110	98.48	rRNA-processing protein FCF1 homolog OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A1S3B8E3	9.2e-110	97.98	rRNA-processing protein FCF1 homolog OS=Cucumis melo OX=3656 GN=LOC103486894 PE=...	[more]
A0A6J1J3K9	1.6e-109	96.97	rRNA-processing protein FCF1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111482358...	[more]
A0A6J1F9T9	1.6e-109	96.97	rRNA-processing protein FCF1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]

BLAST of CsaV3_3G040290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46230.1	8.2e-95	81.73	PIN domain-like family protein	[more]
AT2G46230.2	9.8e-80	82.84	PIN domain-like family protein	[more]
AT1G26530.1	2.2e-71	68.53	PIN domain-like family protein	[more]
AT2G34570.1	4.5e-08	26.17	PIN domain-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002716	PIN domain	SMART	SM00670	PIN_9	coord: 65..164 e-value: 8.6E-15 score: 65.1
None	No IPR available	GENE3D	3.40.50.1010		coord: 51..192 e-value: 1.8E-50 score: 172.7
None	No IPR available	PANTHER	PTHR12416:SF2	RRNA-PROCESSING PROTEIN FCF1 HOMOLOG	coord: 1..197
None	No IPR available	PANTHER	PTHR12416	UNCHARACTERIZED	coord: 1..197
IPR006984	rRNA-processing protein Fcf1/Utp23	PFAM	PF04900	Fcf1	coord: 90..186 e-value: 1.0E-39 score: 134.8
IPR037503	rRNA-processing protein Fcf1, PIN domain	CDD	cd09864	PIN_Fcf1-like	coord: 55..185 e-value: 2.30072E-104 score: 294.058
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 63..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G040290.1	CsaV3_3G040290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0032040	small-subunit processome