
CsaV3_3G040280 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGATAAATTTGTGAATGTATTATTATACAATAAAGTGGGATTAAATTGAATGATTCAATTTGATGCTAAGATGTCACATATGACATATAATATCCCCCACTTATCAAGTGTCCATAACGGCTTAAGAATAAGAATCAAAGGGGGTATTATCGTCAGTAAAACTAAAGTTAAAGGGCAAATTTGGAAACACCGAATAAAAAGGATCAAAGTTTTCCTTCTATGGCACTGGCAGAGCCTCTATTTGAAGACACTCCAAAAGCACTTTCCATTTTATTGCCAAAGGGAATTGCGAAGAAGAAGAAGAAGCTCTCTGTGAAAAAGCTTGCACTCAAATGAAGTTCGACAATGGCGCTAATTTCTACTAGAACCAAAATCTCAAGGATTCTCTCCACTTTCTCTCCTAATACTTTGCTTTCACGACCTCCATTTCCTTCTAATGGCGTCCAGGCGGCTGCTCGCCTCCTTCCGTTTGGAGGATTCGGGTCTTCATTTGCTTCCTCTGCTGTTGCTTCCGTGGAACCCGAAACCCTAGGTTCTAGTGGTATCGGGTTTGAAATCTTGGGCGTTAAGGATTATGAGGATTACCGGAGGTCTCTCTATGGCGATATCACTCATAAGGCTTTGCTCGTTGATGCGGTTGGGACTCTTGTTGTTCCTTCTCAGCCTATGGCTCAGGTCTCCCTCTCTTTCTCTCTCTTCAAAGTCTTAATTCGTTTATTTCTGTTTTTTCTGTGTTAAATGGTTACGAACTTACGATGTGTTTTGTCGCAGATATATAGGGAAATAGGTGAGAAGTATGGAGTGAACTACTCGGAAGGGGAGATTCTCAATAGATATAGAAGAGCGTATGAGAAGCCTTGGGGTAGATCTCGCCTCAGGTCGACTTTCTTCGAATTTCAGTTTATTATGATTAATTTTGGTTTTATTACTCTTAATGTTGTGGTCTCGATCTGGAGACCTTGTTTTCTGTGAATGAAGAGTCCCATGCATTACCCTCATTGACAAAAGACCGTTGTTGACTAGATCAAATCGAACGTATAATTAAGAAGAAATTAGATGTCTTTTAGGTGATTAGCTGTTCATCAAAGTGCATGTGCTATTTGGGTTTTGTAGTTTAGTGTAAAATTATTTGGGCTTAATTGGCATAGTTTCAAGGAAATTATTGTGTATTTAACGAATTTTTTTTCACACTGTTAGGTCATTGACCATTATAATTCTAGCTTTATGTTTGTGGTTGTGGCCATCCAGTTTCCTAGTTTATTTTGTAAATTTATTTTGTCAGAATTAAGTGGACTTAAAACCTTTAATAAATATTAATCAAAATTGATTGTCATGGTTTGTGTTTTCTTGGTCAGTCCGAAGATTAAATTGGTCTAAATATCTTTAATAGTGGCAAACCAGGCTTAGAAATACCTTCCTTTTTCTTCAATTCTTTTTTATTGGAGAAATTGCTTACTCGTTAATGATCTATTGAGATCCTGATTGCTAGCTGCATAACATTGAGGATTTTGTTTTGTCCGAGGGGAAATGGTTAATAAACCTTTCCCAGGATCTTTGTATCAGTTCAAATGGCAGTAGTATCTCCAATTTGAATGGTAGATTATGTCCTCACCAATTAATATGGGTTTTCACTCTGTTTTAGATGATATCATACTAAATTTACTTTCAGGATTTAACATTAATCCTAACTAGATTCCTTTATTCATTAATTGATCTTTTGAGGATTGTTTTGTCTGATTAATCCAGAGAGCGAAAAGTTTTTTTGTTTTAATTCTTCTCCTGTTCCTTTTTAATTAATGGCGTAATGAAAGTAATTGCTTTTATGGAACTCTGTAGATATGTGAATGACGGGAAACCCTTTTGGCAATATATCGTCAGTTCTTCCACAGGCTGTTCTGATTCTCAGTATTTTGAAGAACTCTACAACTACTATACGACTAACAAGGTTAATTTCTGGCAGCCGCTTTTTCCTCTAGGAATTCCACTGTTTGTTTATGTCTTTTATTATTATTGTAACAATCATTTTTGCCGATAATGATAAATCTCTTGCAGGCTTGGCACCTTTGTGATCCTGATGCTGAGAAAGTCTTCAAAGCTTTAAGACAAGCAGGTGTAAAGATAGCTATTGTGTCAAACTTCGACACTCGATTACGACCTCTTTTGCGGGATTTGAATTGTGATCACTGGTTTGACGCTGTAGCAGTGTCAGCTGAAGTGAGTTCATTAATCTCTTTTCACTGCTTCTGATGTTCTTGTATATGTTTTTGCTGCTACCTCTTCTCTTTTTTTTTTTTTTTGTGTATTTCATGCGCTAGGACTTGATTTGGTTACCAACTGCTTTACTTCGACTGTTTGACATGTACATTTGAACTTACTTCAGTTGTTCTTCCTAACCTGATCTCCAACAGGTTGAAGCTGAGAAGCCCAATCCGACAATATTTCTAAAAGCCTGTGAATTATTGGGAGTGAGACCTGAGGATGCCTTACATGTTGGGGATGATCGTAGGAACGATGTATGGGGTGCTAGAGATGCAGGTTGTGATGCATGGCTTTGGGGAAGTGATGTACACTCCTTCAAAGAGGTATACCTCTTACCTCTTATCTGTATCAAAGCGATTCGTCTACTATGGCTCTGTCGTTTTTATAAAACCAAGGTTGACATGCTGGTATTTTGTTATGTTGATGTGTGTAGGTTGCAGAAAGAATTGGAGTGAAAGTGTGAAAGAGAGTTACGAGTTTTAGTAAAAGCATTAAAGTTGAATTTCCATGGAAGCTCTCTGGGATGTACAGGGTTTTACCAGTGAGAACAGCTGAGTGTATATATATGTAAAATATATATGTATCGTGTGCTGTGTTTGTAGTTTGTAGTTTGGTTCGACTGTTTTTGCTACCAAGCACACTAAATAAGAACAAACTCTTTTTTCTTCTTGTTTGTTTCCCTGAAATGGTCAATCGCAGATCTTAGTTGTAAAATAGTGCAAGGGTTTACCAAAAGATTCAGATCGAGTAGGTTTAACTCATGGTAACGTCTTAATAGAATTTAATATTTAATGAGTTTTTCTTTTTCTTTTTCTTTTGCATTTCCATGCTGTACCAGTTTCCCCTGTAAGATTAATGGAAGTTTAGTAAATTTATTGTTGATAACATTATTTGAAGGTGTCTAATCTTTTTTTTAGTTAAAAATGAG ATGGCGCTAATTTCTACTAGAACCAAAATCTCAAGGATTCTCTCCACTTTCTCTCCTAATACTTTGCTTTCACGACCTCCATTTCCTTCTAATGGCGTCCAGGCGGCTGCTCGCCTCCTTCCGTTTGGAGGATTCGGGTCTTCATTTGCTTCCTCTGCTGTTGCTTCCGTGGAACCCGAAACCCTAGGTTCTAGTGGTATCGGGTTTGAAATCTTGGGCGTTAAGGATTATGAGGATTACCGGAGGTCTCTCTATGGCGATATCACTCATAAGGCTTTGCTCGTTGATGCGGTTGGGACTCTTGTTGTTCCTTCTCAGCCTATGGCTCAGATATATAGGGAAATAGGTGAGAAGTATGGAGTGAACTACTCGGAAGGGGAGATTCTCAATAGATATAGAAGAGCGTATGAGAAGCCTTGGGGTAGATCTCGCCTCAGATATGTGAATGACGGGAAACCCTTTTGGCAATATATCGTCAGTTCTTCCACAGGCTGTTCTGATTCTCAGTATTTTGAAGAACTCTACAACTACTATACGACTAACAAGGCTTGGCACCTTTGTGATCCTGATGCTGAGAAAGTCTTCAAAGCTTTAAGACAAGCAGGTGTAAAGATAGCTATTGTGTCAAACTTCGACACTCGATTACGACCTCTTTTGCGGGATTTGAATTGTGATCACTGGTTTGACGCTGTAGCAGTGTCAGCTGAAGTTGAAGCTGAGAAGCCCAATCCGACAATATTTCTAAAAGCCTGTGAATTATTGGGAGTGAGACCTGAGGATGCCTTACATGTTGGGGATGATCGTAGGAACGATGTATGGGGTGCTAGAGATGCAGGTTGTGATGCATGGCTTTGGGGAAGTGATGTACACTCCTTCAAAGAGGTTGCAGAAAGAATTGGAGTGAAAGTGTGA ATGGCGCTAATTTCTACTAGAACCAAAATCTCAAGGATTCTCTCCACTTTCTCTCCTAATACTTTGCTTTCACGACCTCCATTTCCTTCTAATGGCGTCCAGGCGGCTGCTCGCCTCCTTCCGTTTGGAGGATTCGGGTCTTCATTTGCTTCCTCTGCTGTTGCTTCCGTGGAACCCGAAACCCTAGGTTCTAGTGGTATCGGGTTTGAAATCTTGGGCGTTAAGGATTATGAGGATTACCGGAGGTCTCTCTATGGCGATATCACTCATAAGGCTTTGCTCGTTGATGCGGTTGGGACTCTTGTTGTTCCTTCTCAGCCTATGGCTCAGATATATAGGGAAATAGGTGAGAAGTATGGAGTGAACTACTCGGAAGGGGAGATTCTCAATAGATATAGAAGAGCGTATGAGAAGCCTTGGGGTAGATCTCGCCTCAGATATGTGAATGACGGGAAACCCTTTTGGCAATATATCGTCAGTTCTTCCACAGGCTGTTCTGATTCTCAGTATTTTGAAGAACTCTACAACTACTATACGACTAACAAGGCTTGGCACCTTTGTGATCCTGATGCTGAGAAAGTCTTCAAAGCTTTAAGACAAGCAGGTGTAAAGATAGCTATTGTGTCAAACTTCGACACTCGATTACGACCTCTTTTGCGGGATTTGAATTGTGATCACTGGTTTGACGCTGTAGCAGTGTCAGCTGAAGTTGAAGCTGAGAAGCCCAATCCGACAATATTTCTAAAAGCCTGTGAATTATTGGGAGTGAGACCTGAGGATGCCTTACATGTTGGGGATGATCGTAGGAACGATGTATGGGGTGCTAGAGATGCAGGTTGTGATGCATGGCTTTGGGGAAGTGATGTACACTCCTTCAAAGAGGTTGCAGAAAGAATTGGAGTGAAAGTGTGA MALISTRTKISRILSTFSPNTLLSRPPFPSNGVQAAARLLPFGGFGSSFASSAVASVEPETLGSSGIGFEILGVKDYEDYRRSLYGDITHKALLVDAVGTLVVPSQPMAQIYREIGEKYGVNYSEGEILNRYRRAYEKPWGRSRLRYVNDGKPFWQYIVSSSTGCSDSQYFEELYNYYTTNKAWHLCDPDAEKVFKALRQAGVKIAIVSNFDTRLRPLLRDLNCDHWFDAVAVSAEVEAEKPNPTIFLKACELLGVRPEDALHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAERIGVKV* Homology
BLAST of CsaV3_3G040280 vs. NCBI nr
Match: XP_011652195.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis sativus] >KGN59453.1 hypothetical protein Csa_001198 [Cucumis sativus]) HSP 1 Score: 623.6 bits (1607), Expect = 8.8e-175 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. NCBI nr
Match: XP_008443269.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo] >KAA0053875.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo var. makuwa] >TYK25529.1 haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 597.0 bits (1538), Expect = 8.8e-167 Identity = 289/303 (95.38%), Postives = 295/303 (97.36%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. NCBI nr
Match: XP_038905682.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Benincasa hispida]) HSP 1 Score: 587.0 bits (1512), Expect = 9.1e-164 Identity = 283/303 (93.40%), Postives = 292/303 (96.37%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. NCBI nr
Match: XP_023529003.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157 Identity = 277/303 (91.42%), Postives = 283/303 (93.40%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. NCBI nr
Match: XP_022935563.1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 [Cucurbita moschata] >KAG6580886.1 Rhythmically expressed gene 2 protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017644.1 Rhythmically expressed gene 2 protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156 Identity = 275/303 (90.76%), Postives = 282/303 (93.07%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy Swiss-Prot
Match: Q5HZL9 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Xenopus laevis OX=8355 GN=hdhd3 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.0e-16 Identity = 64/203 (31.53%), Postives = 95/203 (46.80%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy Swiss-Prot
Match: O14262 (Putative uncharacterized hydrolase C7D4.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC7D4.05 PE=3 SV=3) HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16 Identity = 60/197 (30.46%), Postives = 101/197 (51.27%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy Swiss-Prot
Match: Q94915 (Rhythmically expressed gene 2 protein OS=Drosophila melanogaster OX=7227 GN=Reg-2 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.9e-16 Identity = 58/209 (27.75%), Postives = 98/209 (46.89%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy Swiss-Prot
Match: Q9CYW4 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Mus musculus OX=10090 GN=Hdhd3 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.5e-15 Identity = 60/207 (28.99%), Postives = 96/207 (46.38%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy Swiss-Prot
Match: Q5E9D6 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Bos taurus OX=9913 GN=HDHD3 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.8e-14 Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy TrEMBL
Match: A0A0A0LCE6 (N-acylneuraminate-9-phosphatase OS=Cucumis sativus OX=3659 GN=Csa_3G821560 PE=4 SV=1) HSP 1 Score: 623.6 bits (1607), Expect = 4.3e-175 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy TrEMBL
Match: A0A5D3DQC8 (Haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006810 PE=4 SV=1) HSP 1 Score: 597.0 bits (1538), Expect = 4.3e-167 Identity = 289/303 (95.38%), Postives = 295/303 (97.36%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy TrEMBL
Match: A0A1S3B7N8 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucumis melo OX=3656 GN=LOC103486892 PE=4 SV=1) HSP 1 Score: 597.0 bits (1538), Expect = 4.3e-167 Identity = 289/303 (95.38%), Postives = 295/303 (97.36%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy TrEMBL
Match: A0A6J1FAW1 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111442399 PE=4 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 5.2e-157 Identity = 275/303 (90.76%), Postives = 282/303 (93.07%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. ExPASy TrEMBL
Match: A0A6J1J8M8 (haloacid dehalogenase-like hydrolase domain-containing protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111482334 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156 Identity = 274/303 (90.43%), Postives = 282/303 (93.07%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. TAIR 10
Match: AT2G41250.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 424.9 bits (1091), Expect = 5.6e-119 Identity = 199/257 (77.43%), Postives = 226/257 (87.94%), Query Frame = 0
BLAST of CsaV3_3G040280 vs. TAIR 10
Match: AT1G14310.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 210.3 bits (534), Expect = 2.2e-54 Identity = 101/210 (48.10%), Postives = 136/210 (64.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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