CsaV3_3G040040 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G040040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	3'-5' exonuclease domain-containing protein
Location	chr3: 32884367 .. 32887340 (+)
RNA-Seq Expression	CsaV3_3G040040
Synteny	CsaV3_3G040040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTATTCTTCTTAACATCACAGACCTCCACATCCCTTACTACACCCACGACTACTACGATATCACTATCGACGACGATGAAATCCTCACTCTCCGCACTGCCTCCATCGACGTGGTCAACTTTTGGGTCGCCACCATCCTTGAAGTCAATAACCGCCGCATCCGCCCTCTCATCGTCGGTCTCGACATCGAGTGGCGTCCTTACTTTGGCCCTAAACCCAACCCCGTCGCCACTTTACAGCTCTGCGTTGGCCACCGCTGCCTCATCTTCCAACTCCTCTACTGCCCGGCTGCCCCTCAGGCTTTGGTCAATTTCTTGTTCGACTCATCCTGCACTTTCGTCGGCGTCGGAATCCACCAGGACGTTCAAAAGCTTTACCATGAGTACGGTCTGACTGTCTCCAACGTTGTGGATCTTAGGGATTTGGCTGTTAATAAGTTGGGGAGAACTTACCTGAGGTATGCCGGACTGAAGAGTCTGTGGAGGGAGGTTCTTGGAAGGGAGATTGAGAAGCCGAAATATATAACTCTGAGTAACTGGGATTCTGTATGGCTGAATTATGCTCAGATACTCTATGCTACTATTGATGCATTTATTTCGTTTGAAATTGGAAGGAGTCTCATGAATCTTTGAATCTTGAATCTTGAATCTTGAATCTTGAAAGGAGTAGATTCTTGTTAGGTGTTTTGATGATGAAATCAGGGTTTGGGATACTTTTGCCATTCTTTTCATGGCTGTTTGTGTTCTGTATTTTGATTGATTCAGTTTATGATAGTTTGTTTGTTTGAGCTGCTTTTGCAAAAGTCTTTTGTTTGTTTTTTGTTCGTCAATTTCAAAACTAATCATCATTAGGAAACGTTTAAGAACAATAATAATAATGTTGTTATATCTAAACTTAAATGCATTTATATCCTATATCCCTCCTCTCATCTTTAATGATCTTATTTAATTAGTTCAATAAACATCTTGTTTCATTTTAATCAAATCTTTGTTAATTATTTCTACTGTTGAGAATTTGAATGGGGTTATTTTTCAAACAAAACCCAATGAGAAATTTTCAATTTAGTTTCCTAGTTTTGGAAGAATCTACACATTTGGTTTCCCTCAACCTTGTTGGAAAGTCTTTTTTCTTTTGTTTTATGGTTTATCTCTTGATTGTTTTTTTCATTTTAAAAAAAAATCACTAAAAGCCAACTTGTCATATCCATGAGGGACAAAAAAAAAAAAAAAGTTAAATATACAATAGATAGTAACTTGGAATGTGTTTTCTTAATAGTTATTGACAAGAATAGAGAGTGAATACTAAGAGGCCTATCACCCCTTATCTTCACTTGATATTGGGCACACCTCTTATTCCTAATCACCATGATCACCTACGCTCTTGCACCATGCTTCTTCGGGAAAGCTACTCAAGCCATAACTATTCAATCGCATAATAAAGCCGTGTACTCAATATTTCAAGCAAGTAGTATATTAGGTTTACGATATATTTTGCTCCACATCACCACATGAAAAATGGAAGTTATTAAAGATGGGTATTTTTAGAAACAATTTAATAATTTAAATATAATTAAAGTAGACAAAGTTCTTACCTTAGGTACGTATTTAAGTTGTATTATGTTAGTTATGGAAGAAAATGATTCGATTATTATTTTAACCTTATCAAAATCAAAGAAAGAAAAATCTTTCAAATTGGTAAACTAGAGATTACAAGTTTAGAAAAATTGGTTTACCAATAACAAGGGGTGGAAGCCCAATTTCCCAGTCGTGTCAATAACTTCAAAGTTCTTCATTTCAGTAGACAATTTTCCCCATGGTGTGGATTAGTTTGTTGGAAAGAGAGATGGATGTATATCTTCAATAGAATCGTGTGGATTAGCTTGTTAGGATTGGGTAAAGTTAGGAACAATATATTTACATACATCTATTATCTATTATAATTATTTTTTCATAAATTTCATATTTACCAGGTTGAATTTCAATTATTGCAGGGCAATTTTTCAACTCTTTCTCTTCTTCTTTAAAATTATTTTCTTCAAGAATTTCTTCTTTTTTTCGTCTATCGTTTTCAAACCGTCTCTTCTAGATGTAAGATCTAAACAATATTAATACAATATTTAAAATGATAGTAGAATTTTAACGATCGTGTATCAATATCGATTAGACCTAAACAGAGATAAATCACGATTAGTAGTAATAGATCATTTAACAAAATTGTTTAGACTAGATACAAACATACACGATTGTTTCATTTTGATACAAGAATGTTTAAACATGTACAAAACCGTATATTATACTTGGTACAGGATGTTTAGATTGAGTATTTTTTTTATTTCATGTTTTTTTCTTTTTCAAAATAATTCTATATTGTAAATATTTTTTATATAATGTAATTTTACATTACAATCGTTTAAAAATCGTTTATTATTCACTTAAATATAATGTAATTTTACAAAAAAAAATATATATCATTCACAATTTTTATTAAGTTAAAACTTAGTTATCTGTAACATTTGATGTAAGATACAATTTTTTTTTTTAATAAACAACAATTAACATAAATTAAATTGGTTTAGTGTGGGAAGGAGTTAAGATATTAAATAGCCAATTGTACGGGTGATCAATTCTAACGTTCGTCGCTCTGTATCCTAAATTATCGCCAATTCTAGGATTGATGAAATCCTAAATTAATAAGCACACGTATTAAAATAAAATTAACTCCTTTTTAGTAATGGAATTATTTAAAAGTTGTATTACTAACAAAATTTCAAACAAAATTGTCCAACCCAATATGTATACCTTAGTGAACGTATAAATACAGAATTATTTTGAACCAATTATTAGTCTACACCGACCAAATGATTTTATGAGATCTCATCAACGTAATGCACTCAACCCACTGCTGAAAATTGCTCGGTGTAAGATTGCAATATGTGATAATGGGCTTCAAAGTTTCAAACAAACAGAATAA

mRNA sequence

ATGCCTATTCTTCTTAACATCACAGACCTCCACATCCCTTACTACACCCACGACTACTACGATATCACTATCGACGACGATGAAATCCTCACTCTCCGCACTGCCTCCATCGACGTGGTCAACTTTTGGGTCGCCACCATCCTTGAAGTCAATAACCGCCGCATCCGCCCTCTCATCGTCGGTCTCGACATCGAGTGGCGTCCTTACTTTGGCCCTAAACCCAACCCCGTCGCCACTTTACAGCTCTGCGTTGGCCACCGCTGCCTCATCTTCCAACTCCTCTACTGCCCGGCTGCCCCTCAGGCTTTGGTCAATTTCTTGTTCGACTCATCCTGCACTTTCGTCGGCGTCGGAATCCACCAGGACGTTCAAAAGCTTTACCATGAGTACGGTCTGACTGTCTCCAACGTTGTGGATCTTAGGGATTTGGCTGTTAATAAGTTGGGGAGAACTTACCTGAGGTATGCCGGACTGAAGAGTCTGTGGAGGGAGGTTCTTGGAAGGGAGATTGAGAAGCCGAAATATATAACTCTGAGTAACTGGGATTCTGTATGGCTGAATTATGCTCAGATACTCTATGCTACTATTGATGCATTTATTTCTCTACACCGACCAAATGATTTTATGAGATCTCATCAACGTAATGCACTCAACCCACTGCTGAAAATTGCTCGGTGTAAGATTGCAATATGTGATAATGGGCTTCAAAGTTTCAAACAAACAGAATAA

Coding sequence (CDS)

ATGCCTATTCTTCTTAACATCACAGACCTCCACATCCCTTACTACACCCACGACTACTACGATATCACTATCGACGACGATGAAATCCTCACTCTCCGCACTGCCTCCATCGACGTGGTCAACTTTTGGGTCGCCACCATCCTTGAAGTCAATAACCGCCGCATCCGCCCTCTCATCGTCGGTCTCGACATCGAGTGGCGTCCTTACTTTGGCCCTAAACCCAACCCCGTCGCCACTTTACAGCTCTGCGTTGGCCACCGCTGCCTCATCTTCCAACTCCTCTACTGCCCGGCTGCCCCTCAGGCTTTGGTCAATTTCTTGTTCGACTCATCCTGCACTTTCGTCGGCGTCGGAATCCACCAGGACGTTCAAAAGCTTTACCATGAGTACGGTCTGACTGTCTCCAACGTTGTGGATCTTAGGGATTTGGCTGTTAATAAGTTGGGGAGAACTTACCTGAGGTATGCCGGACTGAAGAGTCTGTGGAGGGAGGTTCTTGGAAGGGAGATTGAGAAGCCGAAATATATAACTCTGAGTAACTGGGATTCTGTATGGCTGAATTATGCTCAGATACTCTATGCTACTATTGATGCATTTATTTCTCTACACCGACCAAATGATTTTATGAGATCTCATCAACGTAATGCACTCAACCCACTGCTGAAAATTGCTCGGTGTAAGATTGCAATATGTGATAATGGGCTTCAAAGTTTCAAACAAACAGAATAA

Protein sequence

MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYATIDAFISLHRPNDFMRSHQRNALNPLLKIARCKIAICDNGLQSFKQTE*

Homology

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BLAST of CsaV3_3G040040 vs. NCBI nr
Match: KAE8651171.1 (hypothetical protein Csa_002533 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 1.6e-139
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV 60
           MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV
Sbjct: 1   MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV 60

Query: 61  GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH 120
           GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH
Sbjct: 61  GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH 120

Query: 121 QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN 180
           QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN
Sbjct: 121 QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN 180

Query: 181 WDSVWLNYAQILYATIDAFISLHRPNDFMRSHQRNALNPLLKIARCKIAICDNGLQSFKQ 240
           WDSVWLNYAQILYATIDAFISLHRPNDFMRSHQRNALNPLLKIARCKIAICDNGLQSFKQ
Sbjct: 181 WDSVWLNYAQILYATIDAFISLHRPNDFMRSHQRNALNPLLKIARCKIAICDNGLQSFKQ 240

Query: 241 TE 243
           TE
Sbjct: 241 TE 242

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BLAST of CsaV3_3G040040 vs. NCBI nr
Match: XP_004136772.1 (Werner Syndrome-like exonuclease [Cucumis sativus])

HSP 1 Score: 419.1 bits (1076), Expect = 2.6e-113
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV 60
           MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV
Sbjct: 1   MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV 60

Query: 61  GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH 120
           GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH
Sbjct: 61  GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH 120

Query: 121 QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN 180
           QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN
Sbjct: 121 QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN 180

Query: 181 WDSVWLNYAQILYATIDAFIS 202
           WDSVWLNYAQILYATIDAFIS
Sbjct: 181 WDSVWLNYAQILYATIDAFIS 201

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BLAST of CsaV3_3G040040 vs. NCBI nr
Match: KAE8651170.1 (hypothetical protein Csa_000755 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 2.0e-60
Identity = 119/198 (60.10%), Postives = 149/198 (75.25%), Query Frame = 0


Query: 5   LNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDI 64
           L I+D  IP  +HDYYDIT DDDEILTL TAS  +V+ W++ IL ++ RR+  L+VGLD+
Sbjct: 4   LTISDRQIPLNSHDYYDITFDDDEILTLVTASPSMVDMWISEILRIHRRRLHRLVVGLDV 63

Query: 65  EWRPYFGPK-PNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDV 124
           EWRP F     NPVATLQLCVG RCLIFQL++    PQ+L++FL D + TFVGVGI  DV
Sbjct: 64  EWRPNFDRHFRNPVATLQLCVGRRCLIFQLIHASETPQSLIDFLEDDTFTFVGVGIDNDV 123

Query: 125 QKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDS 184
            KLY++Y L V+N VDLR+LA +++     R AGLK+L REVLGREI+KP+ + LS WD 
Sbjct: 124 LKLYNDYDLNVANTVDLRELAADEMQSDEFRTAGLKTLGREVLGREIDKPRNVKLSRWDR 183

Query: 185 VWLNYAQILYATIDAFIS 202
            WLN AQILYAT+DAF+S
Sbjct: 184 QWLNPAQILYATVDAFLS 201

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BLAST of CsaV3_3G040040 vs. NCBI nr
Match: XP_004136771.1 (Werner Syndrome-like exonuclease [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 2.0e-60
Identity = 119/198 (60.10%), Postives = 149/198 (75.25%), Query Frame = 0


Query: 5   LNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDI 64
           L I+D  IP  +HDYYDIT DDDEILTL TAS  +V+ W++ IL ++ RR+  L+VGLD+
Sbjct: 4   LTISDRQIPLNSHDYYDITFDDDEILTLVTASPSMVDMWISEILRIHRRRLHRLVVGLDV 63

Query: 65  EWRPYFGPK-PNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDV 124
           EWRP F     NPVATLQLCVG RCLIFQL++    PQ+L++FL D + TFVGVGI  DV
Sbjct: 64  EWRPNFDRHFRNPVATLQLCVGRRCLIFQLIHASETPQSLIDFLEDDTFTFVGVGIDNDV 123

Query: 125 QKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDS 184
            KLY++Y L V+N VDLR+LA +++     R AGLK+L REVLGREI+KP+ + LS WD 
Sbjct: 124 LKLYNDYDLNVANTVDLRELAADEMQSDEFRTAGLKTLGREVLGREIDKPRNVKLSRWDR 183

Query: 185 VWLNYAQILYATIDAFIS 202
            WLN AQILYAT+DAF+S
Sbjct: 184 QWLNPAQILYATVDAFLS 201

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BLAST of CsaV3_3G040040 vs. NCBI nr
Match: XP_038906336.1 (Werner Syndrome-like exonuclease [Benincasa hispida])

HSP 1 Score: 238.4 bits (607), Expect = 6.4e-59
Identity = 116/199 (58.29%), Postives = 152/199 (76.38%), Query Frame = 0


Query: 4   LLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLD 63
           +L+I+D  IP  +HDYYDIT D+D ILTL TA + VV+ W++ IL ++ RR+  L+VGLD
Sbjct: 3   ILSISDRQIPLNSHDYYDITFDNDAILTLLTACLSVVDMWISEILRIHRRRLHRLVVGLD 62

Query: 64  IEWRPYFGPK-PNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQD 123
           IEWRP F  +   PVATLQLCVG RCLIFQL++    P++L++FL D + TFVGVGI QD
Sbjct: 63  IEWRPNFNRRYRKPVATLQLCVGRRCLIFQLIHTSEIPESLIDFLEDDTFTFVGVGIDQD 122

Query: 124 VQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWD 183
           VQ+LY++Y L V+N VDLR+LA N++ R  L+ AGLK L REVLGREI+KP+ +TLS WD
Sbjct: 123 VQQLYNDYDLKVANTVDLRELAANEMERDDLKNAGLKILGREVLGREIDKPRNVTLSQWD 182

Query: 184 SVWLNYAQILYATIDAFIS 202
              L+  Q+LYAT+DAF+S
Sbjct: 183 RQCLSPGQVLYATVDAFLS 201

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BLAST of CsaV3_3G040040 vs. ExPASy Swiss-Prot
Match: Q84LH3 (Werner Syndrome-like exonuclease OS=Arabidopsis thaliana OX=3702 GN=WEX PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-23
Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 29  ILTLRTAS-IDVVNFWVATILEVNNRRIRPLIVGLDIEWRPYF--GPKPNPVATLQLCVG 88
           IL  +TA+ +D     +  +L+          VGLDIEWRP F  G  P  VAT+Q+CV 
Sbjct: 98  ILYSKTATEVDKRAMQLIKVLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVATVQICVD 157

Query: 89  HRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAV 148
                   ++    PQ+L + + DS+   VG+GI  D  KL+H+YG+++ +V DL DLA 
Sbjct: 158 SNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLAN 217

Query: 149 NKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYATIDAFISLH 204
            K+G    +  GL SL   ++ +E+ KP  I L NW+   L+  Q+ YA  DA+ S H
Sbjct: 218 QKIGGD--KKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWH 273

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BLAST of CsaV3_3G040040 vs. ExPASy Swiss-Prot
Match: O09053 (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 2.4e-16
Identity = 54/148 (36.49%), Postives = 77/148 (52.03%), Query Frame = 0


Query: 59  IVGLDIEWRPYFGP-KPNPVATLQLCVGH-RCLIFQLLYCPAAPQALVNFLFDSSCTFVG 118
           +VG D+EW P + P K + VA +QLCV   +C +F +      PQ L   L + S    G
Sbjct: 72  VVGFDMEWPPIYKPGKRSRVAVIQLCVSESKCYLFHISSMSVFPQGLKMLLENKSIKKAG 131

Query: 119 VGIHQDVQKLYHEYGLTVSNVVDLRDLAVNKL--GRTYLRYAGLKSLWREVLGREIEKPK 178
           VGI  D  KL  ++ + + + V+L D+A  KL    T+     L  L + VLG+++ K K
Sbjct: 132 VGIEGDQWKLLRDFDVKLESFVELTDVANEKLKCAETW----SLNGLVKHVLGKQLLKDK 191

Query: 179 YITLSNWDSVWLNYAQILYATIDAFISL 203
            I  SNW +  L   Q LYA  DA+  L
Sbjct: 192 SIRCSNWSNFPLTEDQKLYAATDAYAGL 215

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BLAST of CsaV3_3G040040 vs. ExPASy Swiss-Prot
Match: Q14191 (Werner syndrome ATP-dependent helicase OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15
Identity = 53/143 (37.06%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 59  IVGLDIEWRP-YFGPKPNPVATLQLCVGH-RCLIFQLLYCPAAPQALVNFLFDSSCTFVG 118
           +VG D+EW P Y   K   VA +QLCV   +C +F +      PQ L   L + +    G
Sbjct: 78  VVGFDMEWPPLYNRGKLGKVALIQLCVSESKCYLFHVSSMSVFPQGLKMLLENKAVKKAG 137

Query: 119 VGIHQDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYI 178
           VGI  D  KL  ++ + + N V+L D+A  KL  T      L SL + +LG+++ K K I
Sbjct: 138 VGIEGDQWKLLRDFDIKLKNFVELTDVANKKLKCT--ETWSLNSLVKHLLGKQLLKDKSI 197

Query: 179 TLSNWDSVWLNYAQILYATIDAF 200
             SNW    L   Q LYA  DA+
Sbjct: 198 RCSNWSKFPLTEDQKLYAATDAY 218

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BLAST of CsaV3_3G040040 vs. ExPASy Swiss-Prot
Match: Q9NVH0 (Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 5.9e-15
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 0


Query: 59  IVGLDIEWRPYFGPKPNPVATLQLC-VGHRCLIFQL--LYC--PAAPQALVNFLFDSSCT 118
           ++G+D EW    G K +P++ LQ+      C++ +L  L C     P+ L++ L D +  
Sbjct: 104 VLGIDCEWVNLEG-KASPLSLLQMASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTIL 163

Query: 119 FVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKP 178
            VGVG  +D  KL  +YGL V   +DLR LA+ +          LKSL   VL   ++K 
Sbjct: 164 KVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMRQRNNLLCNGLSLKSLAETVLNFPLDKS 223

Query: 179 KYITLSNWDSVWLNYAQILYATIDAFISL 203
             +  SNWD+  L   Q++YA  DA IS+
Sbjct: 224 LLLRCSNWDAETLTEDQVIYAARDAQISV 251

[Close]

BLAST of CsaV3_3G040040 vs. ExPASy Swiss-Prot
Match: Q9VGN7 (Exonuclease 3'-5' domain-containing protein 2 OS=Drosophila melanogaster OX=7227 GN=Exd2 PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 5.5e-13
Identity = 59/176 (33.52%), Postives = 82/176 (46.59%), Query Frame = 0


Query: 38  DVVNFWVATILEVNNRRIRPLIVGLDIEWRPYFGPKPNPVATLQLCVGHR--CLIFQLLY 97
           D    WV  + E+ N      ++G D EW    G +  PVA LQL   HR  C +F+L +
Sbjct: 60  DPTTQWV--LNELKNHCQTFKVLGFDCEWITVGGSR-RPVALLQLS-SHRGLCALFRLCH 119

Query: 98  CPAAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAV---------N 157
               PQ L   L D S   VGV   +D  KL H+YG+ V++ +DLR L V          
Sbjct: 120 MKQIPQDLRELLEDDSVIKVGVAPQEDAMKLSHDYGVGVASTLDLRFLCVMAGHKPEGLG 179

Query: 158 KLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYATIDAFISL 203
           KL +T+L Y  L   WR            +  SNW++  L   Q+ YA  DA +++
Sbjct: 180 KLSKTHLNYT-LDKHWR------------LACSNWEAKTLEPKQLDYAANDALMAV 218

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BLAST of CsaV3_3G040040 vs. ExPASy TrEMBL
Match: A0A0A0LFG2 (3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819840 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.3e-113
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV 60
           MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV
Sbjct: 1   MPILLNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIV 60

Query: 61  GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH 120
           GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH
Sbjct: 61  GLDIEWRPYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIH 120

Query: 121 QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN 180
           QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN
Sbjct: 121 QDVQKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSN 180

Query: 181 WDSVWLNYAQILYATIDAFIS 202
           WDSVWLNYAQILYATIDAFIS
Sbjct: 181 WDSVWLNYAQILYATIDAFIS 201

[Close]

BLAST of CsaV3_3G040040 vs. ExPASy TrEMBL
Match: A0A0A0LHC5 (3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819830 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 9.6e-61
Identity = 119/198 (60.10%), Postives = 149/198 (75.25%), Query Frame = 0


Query: 5   LNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDI 64
           L I+D  IP  +HDYYDIT DDDEILTL TAS  +V+ W++ IL ++ RR+  L+VGLD+
Sbjct: 4   LTISDRQIPLNSHDYYDITFDDDEILTLVTASPSMVDMWISEILRIHRRRLHRLVVGLDV 63

Query: 65  EWRPYFGPK-PNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDV 124
           EWRP F     NPVATLQLCVG RCLIFQL++    PQ+L++FL D + TFVGVGI  DV
Sbjct: 64  EWRPNFDRHFRNPVATLQLCVGRRCLIFQLIHASETPQSLIDFLEDDTFTFVGVGIDNDV 123

Query: 125 QKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDS 184
            KLY++Y L V+N VDLR+LA +++     R AGLK+L REVLGREI+KP+ + LS WD 
Sbjct: 124 LKLYNDYDLNVANTVDLRELAADEMQSDEFRTAGLKTLGREVLGREIDKPRNVKLSRWDR 183

Query: 185 VWLNYAQILYATIDAFIS 202
            WLN AQILYAT+DAF+S
Sbjct: 184 QWLNPAQILYATVDAFLS 201

[Close]

BLAST of CsaV3_3G040040 vs. ExPASy TrEMBL
Match: A0A2I4GID7 (Werner Syndrome-like exonuclease OS=Juglans regia OX=51240 GN=LOC109008130 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54
Identity = 110/198 (55.56%), Postives = 143/198 (72.22%), Query Frame = 0


Query: 5   LNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDI 64
           ++I D  +P+ TH+ YD++ D D+I TL T S  +V+ W++ I  ++ RR+  L+VGLD+
Sbjct: 3   ISIYDYELPFDTHNLYDVSFDSDQIGTLLTCSPSLVDSWISDIYRIHRRRLHRLVVGLDL 62

Query: 65  EWRPYFGPK-PNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDV 124
           EWRP F     NPVATLQLCVG RCLIFQL++ P  PQ+LV+FL  +  TFVGVGI  DV
Sbjct: 63  EWRPSFNRHVQNPVATLQLCVGRRCLIFQLIHAPYIPQSLVDFLGQTDFTFVGVGIKSDV 122

Query: 125 QKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDS 184
           +KL  +YGL V+ VVDLR LAV +LG T LR AGLK L  EVLG+ IEKP+ IT+S WD+
Sbjct: 123 EKLLDDYGLEVACVVDLRLLAVEELGTTQLRNAGLKQLAWEVLGKRIEKPRNITMSRWDN 182

Query: 185 VWLNYAQILYATIDAFIS 202
            WL  AQ+ YA +DAF+S
Sbjct: 183 EWLTCAQVQYACLDAFLS 200

[Close]

BLAST of CsaV3_3G040040 vs. ExPASy TrEMBL
Match: A0A6J1D121 (Werner Syndrome-like exonuclease OS=Momordica charantia OX=3673 GN=LOC111016622 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 5.6e-53
Identity = 105/187 (56.15%), Postives = 138/187 (73.80%), Query Frame = 0


Query: 16  THDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDIEWRPYFG-PKP 75
           +H+ YDIT D D+I T  T+S  +V+ W++ IL  + RR+  L+VGLD+EWRP F   + 
Sbjct: 6   SHNCYDITFDSDQIKTTITSSPYMVDHWISRILRFHRRRLHRLLVGLDVEWRPNFNRSRR 65

Query: 76  NPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTV 135
           NP ATLQLCVG RCLIFQL++ P  P +L++FL D + TFVGVGI QD +KL+ +Y LTV
Sbjct: 66  NPAATLQLCVGRRCLIFQLIHAPEIPHSLLHFLGDETFTFVGVGIDQDARKLFDDYDLTV 125

Query: 136 SNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYA 195
           +N VDLR +AV++ GR  LR AGLK L RE+LGREI KPK +T+S WD  +L  AQ+ YA
Sbjct: 126 NNAVDLRSMAVDRTGRRDLRNAGLKDLAREILGREIAKPKAVTMSRWDDEYLTSAQVAYA 185

Query: 196 TIDAFIS 202
           +IDAF+S
Sbjct: 186 SIDAFLS 192

[Close]

BLAST of CsaV3_3G040040 vs. ExPASy TrEMBL
Match: A0A7N2M2Z8 (3'-5' exonuclease domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 5.6e-53
Identity = 106/204 (51.96%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 5   LNITDLHIPYYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDI 64
           ++I DL +   THD +++T++ D I TL T +  +V+ W++ I  ++ RR+  LIVGLD+
Sbjct: 3   MSIVDLEVNQETHDLFEVTLESDHIQTLVTHTPQMVDSWLSDIYRIHRRRLHHLIVGLDV 62

Query: 65  EWRPYFGPK-PNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDV 124
           EWRP F     NPVATLQLCVG RCLIFQL+Y    P +L+ FL D   TFVGVGI  DV
Sbjct: 63  EWRPSFNRNIENPVATLQLCVGRRCLIFQLIYATHFPNSLIEFLGDEDFTFVGVGIASDV 122

Query: 125 QKLYHEYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDS 184
           +KL  +Y L V NVVDLR LAV++LG   L+ AGLK L R VLG E+ KP+++T+S WD+
Sbjct: 123 EKLLDDYDLKVGNVVDLRGLAVDRLGNRDLKNAGLKGLARAVLGLEVHKPRHVTMSRWDN 182

Query: 185 VWLNYAQILYATIDAFISLHRPND 208
            WL+Y QI YA +DAF+S    +D
Sbjct: 183 EWLDYNQIQYACVDAFLSFEIGSD 206

[Close]

BLAST of CsaV3_3G040040 vs. TAIR 10
Match: AT4G13870.1 (Werner syndrome-like exonuclease )

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-24
Identity = 67/182 (36.81%), Postives = 98/182 (53.85%), Query Frame = 0


Query: 29  ILTLRTAS-IDVVNFWVATILEVNNRRIRPLIVGLDIEWRPYF--GPKPNPVATLQLCVG 88
           IL  +TA+ +D     +  +L+          VGLDIEWRP F  G  P  VAT+Q+CV 
Sbjct: 98  ILYSKTATEVDKRAMQLIKVLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVATVQICVD 157

Query: 89  HRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAV 148
                   ++    PQ+L + + DS+   VG+GI  D  KL+H+YG+++ +V DL DLA 
Sbjct: 158 SNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLAN 217

Query: 149 NKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYATIDAFISLHRP 208
            K+G    +  GL SL   ++ +E+ KP  I L NW+   L+  Q+ YA  DA+ S H  
Sbjct: 218 QKIGGD--KKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLY 277

[Close]

BLAST of CsaV3_3G040040 vs. TAIR 10
Match: AT4G13870.2 (Werner syndrome-like exonuclease )

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-24
Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 29  ILTLRTAS-IDVVNFWVATILEVNNRRIRPLIVGLDIEWRPYF--GPKPNPVATLQLCVG 88
           IL  +TA+ +D     +  +L+          VGLDIEWRP F  G  P  VAT+Q+CV 
Sbjct: 98  ILYSKTATEVDKRAMQLIKVLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVATVQICVD 157

Query: 89  HRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDVQKLYHEYGLTVSNVVDLRDLAV 148
                   ++    PQ+L + + DS+   VG+GI  D  KL+H+YG+++ +V DL DLA 
Sbjct: 158 SNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLAN 217

Query: 149 NKLGRTYLRYAGLKSLWREVLGREIEKPKYITLSNWDSVWLNYAQILYATIDAFISLH 204
            K+G    +  GL SL   ++ +E+ KP  I L NW+   L+  Q+ YA  DA+ S H
Sbjct: 218 QKIGGD--KKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWH 273

[Close]

BLAST of CsaV3_3G040040 vs. TAIR 10
Match: AT3G12410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-24
Identity = 68/207 (32.85%), Postives = 104/207 (50.24%), Query Frame = 0


Query: 14  YYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDIEWRP---YF 73
           Y TH  Y +    DE +   T    V++ W+  +L  N     PL+VG+ ++W P   Y 
Sbjct: 12  YNTHLEYSVDFFGDEFIVTVTWDSSVISRWIRNVLFNNRFSSHPLVVGVGVQWTPFSYYS 71

Query: 74  GPKP---------------NPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFV 133
            P+P               NP   LQLCVG+RCLI QL YC   P  L +FL D   TFV
Sbjct: 72  DPRPNNYYADPPPIRYYSDNPADILQLCVGNRCLIIQLGYCDQVPNNLRSFLADPETTFV 131

Query: 134 GVGIHQDVQKLYH-EYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGRE-IEKP 193
           GV   QD  KL    + L +  ++D+R    +  GR+ +R +  + +  E +G + +   
Sbjct: 132 GVWNGQDAGKLARCCHQLEIGELLDIRRYVTDSWGRS-MRRSSFEEIVEECMGYQGVMLD 191

Query: 194 KYITLSNWDSVWLNYAQILYATIDAFI 201
             I++S+W +  L+  QIL A++DA++
Sbjct: 192 PEISMSDWTAYDLDLDQILQASLDAYV 217

[Close]

BLAST of CsaV3_3G040040 vs. TAIR 10
Match: AT3G12460.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 7.8e-23
Identity = 65/215 (30.23%), Postives = 97/215 (45.12%), Query Frame = 0


Query: 14  YYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVNNRRIRPLIVGLDIEWR------ 73
           Y T   Y +    +E+    T    V+  W+  +   N     PL+VG+ ++W       
Sbjct: 11  YATQQRYSVDFFGEELFVTVTPDPSVIGQWIHDVFFHNRLSSHPLVVGVGVQWTPSGYHP 70

Query: 74  ---------------------PYFGPKPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNF 133
                                P F     P  TLQLCVG+RC+I QL YC   PQ L NF
Sbjct: 71  ASPPVSYRSDSSPDSYRSDSPPVFYSSDPPADTLQLCVGNRCIIIQLRYCERVPQVLRNF 130

Query: 134 LFDSSCTFVGVGIHQDVQKLYH-EYGLTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREV 193
           L D   TFVG+   QD  KL    + L ++ ++DLR+   +  GR  +    L+ +  E 
Sbjct: 131 LADRDNTFVGIWNSQDAGKLERSRHQLEIAELMDLREFVSDSSGRRSMYNYSLEKIVEEN 190

Query: 194 LGRE-IEKPKYITLSNWDSVWLNYAQILYATIDAF 200
           LG   +   + +++S+W    L+Y QIL A+ID +
Sbjct: 191 LGYPGVRLDREVSMSDWRVYNLSYDQILQASIDVY 225

[Close]

BLAST of CsaV3_3G040040 vs. TAIR 10
Match: AT3G12470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-22
Identity = 60/190 (31.58%), Postives = 100/190 (52.63%), Query Frame = 0


Query: 14  YYTHDYYDITIDDDEILTLRTASIDVVNFWVATILEVN-NRRIRPLIVGLDIEWRPYFGP 73
           + TH  + +    D+++   T +  V+  W+ ++   N N  + PL+VG+ ++WRP    
Sbjct: 11  FRTHQKHFVDFFGDDLIVTVTPTASVIRRWIRSVRSYNRNHSVHPLVVGIGVQWRPDSSD 70

Query: 74  KPNPVATLQLCVGHRCLIFQLLYCPAAPQALVNFLFDSSCTFVGVGIHQDVQKLYH-EYG 133
              P  TLQLCVG RCLI QL Y    P+ L  FL D   TFVGV   QD +KL    + 
Sbjct: 71  PDPPPKTLQLCVGSRCLIIQLGYNYGLPKVLRTFLADPKTTFVGVWNGQDQKKLEKCRHR 130

Query: 134 LTVSNVVDLRDLAVNKLGRTYLRYAGLKSLWREVLGR-EIEKPKYITLSNWDSVWLNYAQ 193
           + +  ++D+R    +  G   + +   + + +E LGR  +     I +S+W    LN+ Q
Sbjct: 131 VEIGKLLDIRMFVRDSRG-ARMCFCSFEQIVKERLGRVGVRLDPAICMSDWGVYNLNHYQ 190

Query: 194 ILYATIDAFI 201
           +L A+I++++
Sbjct: 191 VLQASIESYV 199

The following BLAST results are available for this feature:

BLAST of CsaV3_3G040040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651171.1	1.6e-139	100.00	hypothetical protein Csa_002533 [Cucumis sativus]	[more]
XP_004136772.1	2.6e-113	100.00	Werner Syndrome-like exonuclease [Cucumis sativus]	[more]
KAE8651170.1	2.0e-60	60.10	hypothetical protein Csa_000755 [Cucumis sativus]	[more]
XP_004136771.1	2.0e-60	60.10	Werner Syndrome-like exonuclease [Cucumis sativus]	[more]
XP_038906336.1	6.4e-59	58.29	Werner Syndrome-like exonuclease [Benincasa hispida]	[more]

BLAST of CsaV3_3G040040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84LH3	3.4e-23	37.08	Werner Syndrome-like exonuclease OS=Arabidopsis thaliana OX=3702 GN=WEX PE=1 SV=...	[more]
O09053	2.4e-16	36.49	Werner syndrome ATP-dependent helicase homolog OS=Mus musculus OX=10090 GN=Wrn P...	[more]
Q14191	2.0e-15	37.06	Werner syndrome ATP-dependent helicase OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2	[more]
Q9NVH0	5.9e-15	34.90	Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE...	[more]
Q9VGN7	5.5e-13	33.52	Exonuclease 3'-5' domain-containing protein 2 OS=Drosophila melanogaster OX=7227...	[more]

BLAST of CsaV3_3G040040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFG2	1.3e-113	100.00	3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A0A0LHC5	9.6e-61	60.10	3'-5' exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G...	[more]
A0A2I4GID7	2.3e-54	55.56	Werner Syndrome-like exonuclease OS=Juglans regia OX=51240 GN=LOC109008130 PE=4 ...	[more]
A0A6J1D121	5.6e-53	56.15	Werner Syndrome-like exonuclease OS=Momordica charantia OX=3673 GN=LOC111016622 ...	[more]
A0A7N2M2Z8	5.6e-53	51.96	3'-5' exonuclease domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of CsaV3_3G040040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13870.1	1.4e-24	36.81	Werner syndrome-like exonuclease	[more]
AT4G13870.2	2.4e-24	37.08	Werner syndrome-like exonuclease	[more]
AT3G12410.1	4.2e-24	32.85	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G12460.1	7.8e-23	30.23	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G12470.1	1.0e-22	31.58	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002562	3'-5' exonuclease domain	SMART	SM00474	35exoneu6	coord: 27..213 e-value: 1.0E-6 score: 38.3
IPR002562	3'-5' exonuclease domain	PFAM	PF01612	DNA_pol_A_exo1	coord: 54..201 e-value: 7.6E-15 score: 55.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 18..204 e-value: 4.7E-53 score: 181.7
None	No IPR available	PANTHER	PTHR13620:SF65	OS01G0660800 PROTEIN	coord: 12..208
None	No IPR available	PANTHER	PTHR13620	3-5 EXONUCLEASE	coord: 12..208
None	No IPR available	CDD	cd06141	WRN_exo	coord: 34..203 e-value: 2.25359E-60 score: 185.86
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 43..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G040040.1	CsaV3_3G040040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006139	nucleobase-containing compound metabolic process
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding