CsaV3_3G040020 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G040020
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Zinc finger protein
Location	chr3: 32879250 .. 32879909 (+)
RNA-Seq Expression	CsaV3_3G040020
Synteny	CsaV3_3G040020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCTGACAAACCCATTAATTCAGATGATGAACATTGCAATCAAGATCAAGATTCCTCCAAAGTTCCTGAATCCGAGCAACAAAAACAACCCGAGACCGAAACCAAAACAAAGGATGAAACCCGAGTTTTCTACTGCAAATTCTGCAGTAGAAAGTTCTCCAATCTACAAGCATTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGATATTGCCAAAAGAGAGAAGGCCGCCGCCGCAGCAGCAGCCGCCGGTGGAAGAACGACGGACGCCTTTGATTCAATTGGCTCTTTTTACCATCCTTACTATTCAGCAATGGCGATTCACTGTCTGCGAAACAAATCCCCTGGGATTCCGATTCGGCCCCAATCGGTGATTCGTAAACCGAGTCGGTCTCGAGTTGAATTGGGCGGCGGCGCCACCGCTGCTGCCTATGGATACCGGTGGTGGCCGAGAGAACAGTACCTGGCGGCGGCGGTGGTGGCGCAACAGCAACAAATACAAAGTGGGGGATTGTTACAAGGCGTTAACAATGGATTTGCATCCATGGCTATGGCGAATAGAAACGCTTCTTCTTCTTCTTCTTCTTCGCAGATTTTTGGTGCTGATCAGTACATTGTCAATGGCCTTGATTTATCTCTCAAACTTTGA

mRNA sequence

ATGTCTTCTTCTGACAAACCCATTAATTCAGATGATGAACATTGCAATCAAGATCAAGATTCCTCCAAAGTTCCTGAATCCGAGCAACAAAAACAACCCGAGACCGAAACCAAAACAAAGGATGAAACCCGAGTTTTCTACTGCAAATTCTGCAGTAGAAAGTTCTCCAATCTACAAGCATTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGATATTGCCAAAAGAGAGAAGGCCGCCGCCGCAGCAGCAGCCGCCGGTGGAAGAACGACGGACGCCTTTGATTCAATTGGCTCTTTTTACCATCCTTACTATTCAGCAATGGCGATTCACTGTCTGCGAAACAAATCCCCTGGGATTCCGATTCGGCCCCAATCGGTGATTCGTAAACCGAGTCGGTCTCGAGTTGAATTGGGCGGCGGCGCCACCGCTGCTGCCTATGGATACCGGTGGTGGCCGAGAGAACAGTACCTGGCGGCGGCGGTGGTGGCGCAACAGCAACAAATACAAAGTGGGGGATTGTTACAAGGCGTTAACAATGGATTTGCATCCATGGCTATGGCGAATAGAAACGCTTCTTCTTCTTCTTCTTCTTCGCAGATTTTTGGTGCTGATCAGTACATTGTCAATGGCCTTGATTTATCTCTCAAACTTTGA

Coding sequence (CDS)

ATGTCTTCTTCTGACAAACCCATTAATTCAGATGATGAACATTGCAATCAAGATCAAGATTCCTCCAAAGTTCCTGAATCCGAGCAACAAAAACAACCCGAGACCGAAACCAAAACAAAGGATGAAACCCGAGTTTTCTACTGCAAATTCTGCAGTAGAAAGTTCTCCAATCTACAAGCATTAGGAGGCCATCAAAACGCCCATAAACGAGAAAGAGATATTGCCAAAAGAGAGAAGGCCGCCGCCGCAGCAGCAGCCGCCGGTGGAAGAACGACGGACGCCTTTGATTCAATTGGCTCTTTTTACCATCCTTACTATTCAGCAATGGCGATTCACTGTCTGCGAAACAAATCCCCTGGGATTCCGATTCGGCCCCAATCGGTGATTCGTAAACCGAGTCGGTCTCGAGTTGAATTGGGCGGCGGCGCCACCGCTGCTGCCTATGGATACCGGTGGTGGCCGAGAGAACAGTACCTGGCGGCGGCGGTGGTGGCGCAACAGCAACAAATACAAAGTGGGGGATTGTTACAAGGCGTTAACAATGGATTTGCATCCATGGCTATGGCGAATAGAAACGCTTCTTCTTCTTCTTCTTCTTCGCAGATTTTTGGTGCTGATCAGTACATTGTCAATGGCCTTGATTTATCTCTCAAACTTTGA

Protein sequence

MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL*

Homology

[Close]

BLAST of CsaV3_3G040020 vs. NCBI nr
Match: XP_004136633.1 (zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001317 [Cucumis sativus])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180
           IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN
Sbjct: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180

Query: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL
Sbjct: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of CsaV3_3G040020 vs. NCBI nr
Match: XP_008443609.1 (PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo] >ADN33884.1 zinc finger protein [Cucumis melo subsp. melo] >KAA0053898.1 zinc finger protein GIS-like [Cucumis melo var. makuwa] >TYK25508.1 zinc finger protein GIS-like [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 5.7e-83
Identity = 179/226 (79.20%), Postives = 186/226 (82.30%), Query Frame = 0


Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDK  N+ D   N +QDS K     + +QPETE K K+ETRVFYCKFCSR FSNLQA
Sbjct: 1   MSSSDKS-NASDHERNYNQDSFK-----ESEQPETEAKAKEETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTD FDSIGSFYHPYYS MAIH LRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGG-------ATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180
            PIRPQSVIRKPSRSRVEL GG       A AAAYGYRWWPREQY+AA   AQQQQIQSG
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSG 180

Query: 181 GLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           GLLQG NNGF S+AM N NA SSSSS QIFGADQ IVNGLDLSLKL
Sbjct: 181 GLLQGFNNGFESIAMENINA-SSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of CsaV3_3G040020 vs. NCBI nr
Match: XP_038903464.1 (zinc finger protein 3-like [Benincasa hispida])

HSP 1 Score: 239.6 bits (610), Expect = 2.6e-59
Identity = 150/219 (68.49%), Postives = 163/219 (74.43%), Query Frame = 0


Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSD+     DEH N  QDSSK+ E E      TE K KDETRVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDR----SDEHHN--QDSSKLIEPE--TVTVTEMKPKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAA AAAA  R+TDA   + SFYHPYYSAMAIH LRNK  G
Sbjct: 61  LGGHQNAHKRERDIAKREKAAATAAAA--RSTDA---LLSFYHPYYSAMAIHSLRNKDLG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180
            PIRP S IRKPSRSRVELGG   AAAY YR W REQY+AA   AQQQQ+Q+  LLQG N
Sbjct: 121 FPIRPHSAIRKPSRSRVELGG---AAAYAYRLWSREQYMAA---AQQQQLQTVALLQGEN 180

Query: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
                +      ++++SSSSQIFG DQY +NGLDLSLKL
Sbjct: 181 LAATRLESIALGSTNASSSSQIFGVDQYSINGLDLSLKL 200

[Close]

BLAST of CsaV3_3G040020 vs. NCBI nr
Match: XP_023528967.1 (zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-55
Identity = 135/204 (66.18%), Postives = 148/204 (72.55%), Query Frame = 0


Query: 35  TETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAA--------- 94
           TET+TK ETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKA AAAA         
Sbjct: 38  TETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTT 97

Query: 95  -AAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGAT 154
            AA   +TDAFDSIGSFYHPYYSAMAI  LRNK+ G PIRP   IRKP+R +        
Sbjct: 98  TAAAATSTDAFDSIGSFYHPYYSAMAIQSLRNKALGFPIRPP--IRKPTRLQ-------- 157

Query: 155 AAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNG---------FASMAMANRNASS 214
           A A+G RWWPREQY+AAA     QQ+  GGL Q  NNG           S+AMA+RNA S
Sbjct: 158 AVAHGCRWWPREQYMAAAAA---QQLHFGGLWQAANNGGRENLAATELESIAMASRNA-S 217

Query: 215 SSSSSQIFGADQYIVNGLDLSLKL 220
           SSSSSQIFGADQY ++GLDL+LKL
Sbjct: 218 SSSSSQIFGADQYNIHGLDLTLKL 227

[Close]

BLAST of CsaV3_3G040020 vs. NCBI nr
Match: XP_022934598.1 (zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 225.7 bits (574), Expect = 3.9e-55
Identity = 134/205 (65.37%), Postives = 147/205 (71.71%), Query Frame = 0


Query: 35  TETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAA----------- 94
           TET+TK ETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKA AA           
Sbjct: 38  TETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTT 97

Query: 95  AAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGA 154
           AAAA   TT AFDSIGSFYHPYYSAMAIH LRNK+ G PIRP   IRKP+R +       
Sbjct: 98  AAAAAATTTGAFDSIGSFYHPYYSAMAIHALRNKALGFPIRPP--IRKPTRPQ------- 157

Query: 155 TAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNG---------FASMAMANRNAS 214
            A A+G RWWPREQY+AAA     QQ+  GGL Q  NNG           S+AMA+RNA 
Sbjct: 158 -AVAHGCRWWPREQYMAAA-----QQLHFGGLWQAANNGGRENLATTELESIAMASRNA- 217

Query: 215 SSSSSSQIFGADQYIVNGLDLSLKL 220
            +SSSSQIFGADQY ++GLDL+LKL
Sbjct: 218 -TSSSSQIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.8e-10
Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 36  ETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAF 95
           E+ T  E ++F C +C R F + QALGGHQNAHKRER +AKR +  AA+A+A        
Sbjct: 51  ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASA-------- 110

Query: 96  DSIGSFYHPY-YSAMAIHCLRNKSPGIPIRPQSVIRKPS 134
                F HPY +S +  H   N    + I+  S+  K S
Sbjct: 111 -----FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLS 136

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 2.8e-08
Identity = 46/113 (40.71%), Postives = 56/113 (49.56%), Query Frame = 0


Query: 2   SSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQAL 61
           SS   P++S  E  N        PE +QQ+QP          RVF C +C RKF + QAL
Sbjct: 55  SSLTLPLSSTSESSN--------PEQQQQQQPSV------SKRVFSCNYCQRKFYSSQAL 114

Query: 62  GGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCL 115
           GGHQNAHKRER +AKR      A    GR +       S Y    +A A+ CL
Sbjct: 115 GGHQNAHKRERTLAKRAMRMGLAGVFPGRGS------SSNYAAAATAAALSCL 147

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.2e-08
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 26 ESEQQKQPETETKTKDET----RVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAA 82
          E E++ +P  E    DE     R+F C FCSRKF + QALGGHQNAHK+ER  A+R K A
Sbjct: 11 EGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0


Query: 37 TKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKR 78
          TK +   RVF C +C RKF + QALGGHQNAHKRER +AKR
Sbjct: 50 TKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 90

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.1e-07
Identity = 52/157 (33.12%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 44  RVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGS--- 103
           R + C++C R+F N QALGGHQNAHK+ER   KR +  A   AA       F + GS   
Sbjct: 71  RKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAAN-----FSNAGSASQ 130

Query: 104 -FYHPYYSAMA--IHCLRNKSPGIPI-RPQSVIRKPSRSRVEL---------GGGATAAA 163
              +P  SA A   H L + +   P+  P   + + S S++ +          GGA A  
Sbjct: 131 FLRNPIVSAFAPPPHLLSSSAVPQPMGGPWMYLPRVSPSQLHVSHGCVIQDGSGGAGAGG 190

Query: 164 YGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNGFA 185
           + Y +  R+      V AQ + +Q+ G    V NGF+
Sbjct: 191 FSYEYGARDSGF-GVVGAQMRHVQAHGPRPSV-NGFS 220

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy TrEMBL
Match: A0A0A0LBM7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA
Sbjct: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180
           IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN
Sbjct: 121 IPIRPQSVIRKPSRSRVELGGGATAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVN 180

Query: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL
Sbjct: 181 NGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 219

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy TrEMBL
Match: A0A5D3DPN0 (Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006570 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.8e-83
Identity = 179/226 (79.20%), Postives = 186/226 (82.30%), Query Frame = 0


Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDK  N+ D   N +QDS K     + +QPETE K K+ETRVFYCKFCSR FSNLQA
Sbjct: 1   MSSSDKS-NASDHERNYNQDSFK-----ESEQPETEAKAKEETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTD FDSIGSFYHPYYS MAIH LRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGG-------ATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180
            PIRPQSVIRKPSRSRVEL GG       A AAAYGYRWWPREQY+AA   AQQQQIQSG
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSG 180

Query: 181 GLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           GLLQG NNGF S+AM N NA SSSSS QIFGADQ IVNGLDLSLKL
Sbjct: 181 GLLQGFNNGFESIAMENINA-SSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy TrEMBL
Match: E5GBP2 (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.8e-83
Identity = 179/226 (79.20%), Postives = 186/226 (82.30%), Query Frame = 0


Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDK  N+ D   N +QDS K     + +QPETE K K+ETRVFYCKFCSR FSNLQA
Sbjct: 1   MSSSDKS-NASDHERNYNQDSFK-----ESEQPETEAKAKEETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTD FDSIGSFYHPYYS MAIH LRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGG-------ATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180
            PIRPQSVIRKPSRSRVEL GG       A AAAYGYRWWPREQY+AA   AQQQQIQSG
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSG 180

Query: 181 GLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           GLLQG NNGF S+AM N NA SSSSS QIFGADQ IVNGLDLSLKL
Sbjct: 181 GLLQGFNNGFESIAMENINA-SSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy TrEMBL
Match: A0A1S3B7Y9 (uncharacterized protein LOC103487164 OS=Cucumis melo OX=3656 GN=LOC103487164 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.8e-83
Identity = 179/226 (79.20%), Postives = 186/226 (82.30%), Query Frame = 0


Query: 1   MSSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQA 60
           MSSSDK  N+ D   N +QDS K     + +QPETE K K+ETRVFYCKFCSR FSNLQA
Sbjct: 1   MSSSDKS-NASDHERNYNQDSFK-----ESEQPETEAKAKEETRVFYCKFCSRNFSNLQA 60

Query: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPG 120
           LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTD FDSIGSFYHPYYS MAIH LRNKSPG
Sbjct: 61  LGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDVFDSIGSFYHPYYSVMAIHSLRNKSPG 120

Query: 121 IPIRPQSVIRKPSRSRVELGGG-------ATAAAYGYRWWPREQYLAAAVVAQQQQIQSG 180
            PIRPQSVIRKPSRSRVEL GG       A AAAYGYRWWPREQY+AA   AQQQQIQSG
Sbjct: 121 FPIRPQSVIRKPSRSRVELSGGGATAAAAAAAAAYGYRWWPREQYMAALAAAQQQQIQSG 180

Query: 181 GLLQGVNNGFASMAMANRNASSSSSSSQIFGADQYIVNGLDLSLKL 220
           GLLQG NNGF S+AM N NA SSSSS QIFGADQ IVNGLDLSLKL
Sbjct: 181 GLLQGFNNGFESIAMENINA-SSSSSPQIFGADQCIVNGLDLSLKL 219

[Close]

BLAST of CsaV3_3G040020 vs. ExPASy TrEMBL
Match: A0A6J1F842 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55
Identity = 134/205 (65.37%), Postives = 147/205 (71.71%), Query Frame = 0


Query: 35  TETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAA----------- 94
           TET+TK ETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKA AA           
Sbjct: 38  TETRTKRETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAVAAAAAAMSFRTTT 97

Query: 95  AAAAGGRTTDAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGA 154
           AAAA   TT AFDSIGSFYHPYYSAMAIH LRNK+ G PIRP   IRKP+R +       
Sbjct: 98  AAAAAATTTGAFDSIGSFYHPYYSAMAIHALRNKALGFPIRPP--IRKPTRPQ------- 157

Query: 155 TAAAYGYRWWPREQYLAAAVVAQQQQIQSGGLLQGVNNG---------FASMAMANRNAS 214
            A A+G RWWPREQY+AAA     QQ+  GGL Q  NNG           S+AMA+RNA 
Sbjct: 158 -AVAHGCRWWPREQYMAAA-----QQLHFGGLWQAANNGGRENLATTELESIAMASRNA- 217

Query: 215 SSSSSSQIFGADQYIVNGLDLSLKL 220
            +SSSSQIFGADQY ++GLDL+LKL
Sbjct: 218 -TSSSSQIFGADQYNIHGLDLTLKL 225

[Close]

BLAST of CsaV3_3G040020 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 65.5 bits (158), Expect = 6.2e-11
Identity = 40/99 (40.40%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 36  ETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAF 95
           E+ T  E ++F C +C R F + QALGGHQNAHKRER +AKR +  AA+A+A        
Sbjct: 51  ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASA-------- 110

Query: 96  DSIGSFYHPY-YSAMAIHCLRNKSPGIPIRPQSVIRKPS 134
                F HPY +S +  H   N    + I+  S+  K S
Sbjct: 111 -----FGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLS 136

[Close]

BLAST of CsaV3_3G040020 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 47/134 (35.07%), Postives = 62/134 (46.27%), Query Frame = 0


Query: 33  PETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAAAAAAAAGGRTT 92
           P     T  E ++F C +C R F + QALGGHQNAHKRER +AKR +  A+AAA G    
Sbjct: 91  PSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFG---- 150

Query: 93  DAFDSIGSFYHPYYSAMAIHCLRNKSPGIPIRPQSVIRKPSRSRVELGGGATAAAYGYRW 152
                     HPY  A      +  +  + I+  S+  KPS   V  GG      YG   
Sbjct: 151 ----------HPYGFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNV-YGG-----EYGQIN 204

Query: 153 WPREQYLAAAVVAQ 167
           W R   +    +A+
Sbjct: 211 WSRIPLVQQPAIAK 204

[Close]

BLAST of CsaV3_3G040020 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 46/113 (40.71%), Postives = 56/113 (49.56%), Query Frame = 0


Query: 2   SSSDKPINSDDEHCNQDQDSSKVPESEQQKQPETETKTKDETRVFYCKFCSRKFSNLQAL 61
           SS   P++S  E  N        PE +QQ+QP          RVF C +C RKF + QAL
Sbjct: 55  SSLTLPLSSTSESSN--------PEQQQQQQPSV------SKRVFSCNYCQRKFYSSQAL 114

Query: 62  GGHQNAHKRERDIAKREKAAAAAAAAGGRTTDAFDSIGSFYHPYYSAMAIHCL 115
           GGHQNAHKRER +AKR      A    GR +       S Y    +A A+ CL
Sbjct: 115 GGHQNAHKRERTLAKRAMRMGLAGVFPGRGS------SSNYAAAATAAALSCL 147

[Close]

BLAST of CsaV3_3G040020 vs. TAIR 10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 34  ETETKTKDETRVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREK 80
           E+ T+ + + RVF C FC ++FS  QALGGHQNAHK+ER +AKR K
Sbjct: 55  ESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRK 100

[Close]

BLAST of CsaV3_3G040020 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.8e-09
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 26 ESEQQKQPETETKTKDET----RVFYCKFCSRKFSNLQALGGHQNAHKRERDIAKREKAA 82
          E E++ +P  E    DE     R+F C FCSRKF + QALGGHQNAHK+ER  A+R K A
Sbjct: 11 EGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRA 70

The following BLAST results are available for this feature:

BLAST of CsaV3_3G040020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136633.1	4.8e-114	100.00	zinc finger protein 1 [Cucumis sativus] >KGN59425.1 hypothetical protein Csa_001...	[more]
XP_008443609.1	5.7e-83	79.20	PREDICTED: uncharacterized protein LOC103487164 [Cucumis melo] >ADN33884.1 zinc ...	[more]
XP_038903464.1	2.6e-59	68.49	zinc finger protein 3-like [Benincasa hispida]	[more]
XP_023528967.1	1.3e-55	66.18	zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934598.1	3.9e-55	65.37	zinc finger protein 1-like [Cucurbita moschata]	[more]

BLAST of CsaV3_3G040020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	8.8e-10	40.40	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	2.8e-08	40.71	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q9FKA9	8.2e-08	53.33	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39266	1.8e-07	65.85	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q9C9H1	4.1e-07	33.12	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]

BLAST of CsaV3_3G040020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBM7	2.3e-114	100.00	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G819820 P...	[more]
A0A5D3DPN0	2.8e-83	79.20	Zinc finger protein GIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GBP2	2.8e-83	79.20	Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B7Y9	2.8e-83	79.20	uncharacterized protein LOC103487164 OS=Cucumis melo OX=3656 GN=LOC103487164 PE=...	[more]
A0A6J1F842	1.9e-55	65.37	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441732 PE=4 SV...	[more]

BLAST of CsaV3_3G040020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25160.1	6.2e-11	40.40	zinc finger protein 3	[more]
AT5G10970.1	1.5e-09	35.07	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G66140.1	2.0e-09	40.71	zinc finger protein 4	[more]
AT5G01860.1	2.0e-09	58.70	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G48890.1	5.8e-09	53.33	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 20..94 e-value: 6.7E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..39
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 18..219
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 18..219
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 48..68
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 46..73 score: 11.156685
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 43..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G040020.1	CsaV3_3G040020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway