CsaV3_3G039740 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G039740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	40S ribosomal protein s2
Location	chr3: 32652300 .. 32655054 (+)
RNA-Seq Expression	CsaV3_3G039740
Synteny	CsaV3_3G039740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTGATAGACAATGTTATAAAAATTGGTATATCACCGATAAATCATACGAGTCTATCAGTGATACAAGTCTATCAGCAATAGTTTTACTATATTTACAATTACTATATTTACAATTTTTTTTAAATGTTGCTATATGGTTGATTATTATTTCTCAAATCGTTGTCCACCTCAAGAAAATCATCTAAAAATATTTGCCGGGTACAAATTAGAACTCCGGCCCACCAAAGTCCGTCCAATCCAAAACCCTAGATTTCTGAAAACCCTAGCTTCCCTTCCTTTACAAATCTCCTCCTCATATAAGTTCCTCATTCCGTCATCCATCGCAAATTCCTGTCCAACGCCTCACATTTCCTTCCTCTTTCTTCCCATTTACCTGAAAATGGCGGAGCGCGGCGGATTTGGACGAGGATTTGGCGGCAGAGGCCGTGGCGGAGGTGACCGCGGACGTGGAGGTCGCCGCCGAGCCGGTCGACGAGACGAAGAAGAGAAATGGGTTCCAGTCACTAAGCTAGGGCGCCTCGTGAAAGAGGGAAAGATCCAATCTTTGGAGCAGATCTATCTCCATTCTCTCCCCATTAAGGAACATCAGATCGTTGATACCCTTATTGGTCCTAGCCTCAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACTCGTGCCGGACAGAGGACCCGTTTCAAGGCGTTCGTCGTCGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTCAAGTGTAGTAAAGAAGTTGCTACAGCGATTCGTGGTTCGATTATTTTGGCTAAGTTGTCTGTGATTCCCGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCCCATACGGTGCCGTGTAAAGTTACTGGAAAATGTGGGTCCGTTACCGTCCGGATGGTTCCGGCGCCGCGAGGTGCTGGGATTGTGGCGGCTAGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATTGAGGATGTGTTTACATCTTCTAGAGGATCGACCAAAACTCTCGGAAACTTTGTTAAGGTTTGACACAACTTTAATGGTTGCCCTGTACTCTTTAGTTTATATTTTTGCTTTGTTCTACTAATAATATATTGGTTTCACTTCATCATTATGAATGGTATCAATTAGTTAATCACTAAATCTTTCTTAGCCTGTTCGTTTTGAAAGCTTGATCAGGATGGAATTGAGCCTTAGATAGTGTAATTTTAAGTATTTGATTTGTTTTCAGTTCAGATAGTCTAATTTAATTCTGTAACATGTTCTCGAGTAGTTTTCACTGATTTAAAAGCATGCTAATTGAAGGAGTGGACCAAGTTTTGATATAGTGTTTGCTGTTTTCTACCTCAAAAGTTGTCCAACATCACTGAAATGTTTCTATGGACTTGCATTATTATGCTGTGTTGCATTCATTGTTACATTGTGTATAGCTCAAATATCCTGCTTTAAGATGATTAATATTTATTGTCCGGAGAATTGAGACCAAAACAAAATTTAGAAGAAAAATGAGTTAGGGGCTTTATTATTTTTGGTCAAATTGCTAGTATGTTCCTTATGGGTGGAAGAAAGTTAGAATTTCACCTATGATCTTAAAAGTTAGAATTTGGTCCTTTTGGTTTGATGAACCTTCATAATTAGTCCTTATAGTTTGATAAATGGGTCCCTATCGTAGGGACTGCATATGAAGTTTGGGGACTATTTTATCCTTAATCATTTGATGTTGAATTTCAAATTAGATGGGTTGTTAGATTTCAGTTCGAGAAAGGGTCATTTGAAACCTTTTATAAAGTAACGTTGTCTGGCTGCATGTTGTTGCTCTTGAATTATTAACTATCACACCATGTTGTGCCATTTTTGGTTGCTCCACAACAGTGAAGTTCTGTTCCAGCTAAGAAAACCCTTCTTGATTTTGTGGCGTCAATTCATATTGATCTGTGGCTATTTTCTTGTTGTTAATAAGAGCGTTTTTTGTCTATCAAGTCGTATATGATATCATGTGGGTCTAATTTCTTCCTCTTTATTGCCATTTCAGGCAACATTTGACTGTCTTCTGAGAACATACGGCTTCTTAACACCTGAATTTTGGAGGGAGACACGCTTCACAAAATCCCCATTCCAAGAACACACAGATTTGTTGGCGAAACCCACAGTGAAGGCATTGTTGTTGGAAGATCCTGACAGGGTTACTGCTTGAACTTGGTTAATATCTTCTTCCTTCTCTTCTTTCAATTATGGGAATATGTTGATGGTTTCTTGTATGAAAAAGGTCCCATATCATTTGTTCTCTGGTTGAGTTGTGTTACTTCAAAGAACAATAGTTTTGTTTTACCTTTTATTTTTCACAAATTTTGAATTTTGACTGTAATTTATTTACCACCTTTTGATGGCGAATAGATTTTTTTTTTTACTTGTTATTACTGTCTTCGCAGGAATTTCATTTTTTTGCCCACATATGGTTTTGTGAGTTTTGGTTGCCAACAACTGAGATTACATAAATGATGTGGTTGAAAATTAGGAAGGGAGATTATCAAGTTTTAACCTAATGATGCATTTTTTGGTGTTGAACTAAAATTAGGAAGGTGGATTATCATGTATTAACTATATATGTTATTTGGAAATTGTAGGGTTTTAGGGCGTGCCATTAACTATATATATAGTTTTTTTTTAAATAAAATGAATTAAAATGGAAGGCTAGATAGGTATCAGAGATAAACTAAAGAGTCCAGTAGCTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGGTTGATTATTATTTCTCAAATCGTTGTCCACCTCAAGAAAATCATCTAAAAATATTTGCCGGGTACAAATTAGAACTCCGGCCCACCAAAGTCCGTCCAATCCAAAACCCTAGATTTCTGAAAACCCTAGCTTCCCTTCCTTTACAAATCTCCTCCTCATATAAGTTCCTCATTCCGTCATCCATCGCAAATTCCTGTCCAACGCCTCACATTTCCTTCCTCTTTCTTCCCATTTACCTGAAAATGGCGGAGCGCGGCGGATTTGGACGAGGATTTGGCGGCAGAGGCCGTGGCGGAGGTGACCGCGGACGTGGAGGTCGCCGCCGAGCCGGTCGACGAGACGAAGAAGAGAAATGGGTTCCAGTCACTAAGCTAGGGCGCCTCGTGAAAGAGGGAAAGATCCAATCTTTGGAGCAGATCTATCTCCATTCTCTCCCCATTAAGGAACATCAGATCGTTGATACCCTTATTGGTCCTAGCCTCAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACTCGTGCCGGACAGAGGACCCGTTTCAAGGCGTTCGTCGTCGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTCAAGTGTAGTAAAGAAGTTGCTACAGCGATTCGTGGTTCGATTATTTTGGCTAAGTTGTCTGTGATTCCCGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCCCATACGGTGCCGTGTAAAGTTACTGGAAAATGTGGGTCCGTTACCGTCCGGATGGTTCCGGCGCCGCGAGGTGCTGGGATTGTGGCGGCTAGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATTGAGGATGTGTTTACATCTTCTAGAGGATCGACCAAAACTCTCGGAAACTTTGTTAAGGCAACATTTGACTGTCTTCTGAGAACATACGGCTTCTTAACACCTGAATTTTGGAGGGAGACACGCTTCACAAAATCCCCATTCCAAGAACACACAGATTTGTTGGCGAAACCCACAGTGAAGGCATTGTTGTTGGAAGATCCTGACAGGGTTACTGCTTGA

Coding sequence (CDS)

ATGGTTGATTATTATTTCTCAAATCGTTGTCCACCTCAAGAAAATCATCTAAAAATATTTGCCGGGTACAAATTAGAACTCCGGCCCACCAAAGTCCGTCCAATCCAAAACCCTAGATTTCTGAAAACCCTAGCTTCCCTTCCTTTACAAATCTCCTCCTCATATAAGTTCCTCATTCCGTCATCCATCGCAAATTCCTGTCCAACGCCTCACATTTCCTTCCTCTTTCTTCCCATTTACCTGAAAATGGCGGAGCGCGGCGGATTTGGACGAGGATTTGGCGGCAGAGGCCGTGGCGGAGGTGACCGCGGACGTGGAGGTCGCCGCCGAGCCGGTCGACGAGACGAAGAAGAGAAATGGGTTCCAGTCACTAAGCTAGGGCGCCTCGTGAAAGAGGGAAAGATCCAATCTTTGGAGCAGATCTATCTCCATTCTCTCCCCATTAAGGAACATCAGATCGTTGATACCCTTATTGGTCCTAGCCTCAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACTCGTGCCGGACAGAGGACCCGTTTCAAGGCGTTCGTCGTCGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTCAAGTGTAGTAAAGAAGTTGCTACAGCGATTCGTGGTTCGATTATTTTGGCTAAGTTGTCTGTGATTCCCGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCCCATACGGTGCCGTGTAAAGTTACTGGAAAATGTGGGTCCGTTACCGTCCGGATGGTTCCGGCGCCGCGAGGTGCTGGGATTGTGGCGGCTAGAGTGCCCAAGAAGGTCTTGCAGTTCGCTGGGATTGAGGATGTGTTTACATCTTCTAGAGGATCGACCAAAACTCTCGGAAACTTTGTTAAGGCAACATTTGACTGTCTTCTGAGAACATACGGCTTCTTAACACCTGAATTTTGGAGGGAGACACGCTTCACAAAATCCCCATTCCAAGAACACACAGATTTGTTGGCGAAACCCACAGTGAAGGCATTGTTGTTGGAAGATCCTGACAGGGTTACTGCTTGA

Protein sequence

MVDYYFSNRCPPQENHLKIFAGYKLELRPTKVRPIQNPRFLKTLASLPLQISSSYKFLIPSSIANSCPTPHISFLFLPIYLKMAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDRVTA*

Homology

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BLAST of CsaV3_3G039740 vs. NCBI nr
Match: KGN59555.2 (hypothetical protein Csa_001030 [Cucumis sativus])

HSP 1 Score: 698.7 bits (1802), Expect = 2.5e-197
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MVDYYFSNRCPPQENHLKIFAGYKLELRPTKVRPIQNPRFLKTLASLPLQISSSYKFLIP 60
           MVDYYFSNRCPPQENHLKIFAGYKLELRPTKVRPIQNPRFLKTLASLPLQISSSYKFLIP
Sbjct: 1   MVDYYFSNRCPPQENHLKIFAGYKLELRPTKVRPIQNPRFLKTLASLPLQISSSYKFLIP 60

Query: 61  SSIANSCPTPHISFLFLPIYLKMAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKW 120
           SSIANSCPTPHISFLFLPIYLKMAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKW
Sbjct: 61  SSIANSCPTPHISFLFLPIYLKMAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKW 120

Query: 121 VPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ 180
           VPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Sbjct: 121 VPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ 180

Query: 181 RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTV 240
           RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTV
Sbjct: 181 RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTV 240

Query: 241 PCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKAT 300
           PCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKAT
Sbjct: 241 PCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKAT 300

Query: 301 FDCLLRTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           FDCLLRTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 301 FDCLLRTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDRVTA 351

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BLAST of CsaV3_3G039740 vs. NCBI nr
Match: KAG7017612.1 (40S ribosomal protein S2-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537.7 bits (1384), Expect = 7.4e-149
Identity = 276/306 (90.20%), Postives = 286/306 (93.46%), Query Frame = 0


Query: 52  SSSYKFLIPSSIANSCP--TPHI----SFLFLPIYLKMAERGGFGRGFGGRGRGGGDRGR 111
           S+ + F++ SS+   C     H+    SF F P  L MAERGGFGRGFGGRGRGGGDRGR
Sbjct: 7   STLFTFILSSSLHQLCQFLVQHLRSFHSFNFPPFSLSMAERGGFGRGFGGRGRGGGDRGR 66

Query: 112 GGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDE 171
           GGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQI+DTLIGPSLKDE
Sbjct: 67  GGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDE 126

Query: 172 VMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPV 231
           VMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPV
Sbjct: 127 VMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPV 186

Query: 232 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTS 291
           RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTS
Sbjct: 187 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTS 246

Query: 292 SRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLED 351
           SRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLED
Sbjct: 247 SRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLED 306

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BLAST of CsaV3_3G039740 vs. NCBI nr
Match: XP_011652156.1 (40S ribosomal protein S2-4 [Cucumis sativus])

HSP 1 Score: 531.2 bits (1367), Expect = 6.9e-147
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

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BLAST of CsaV3_3G039740 vs. NCBI nr
Match: XP_038906344.1 (40S ribosomal protein S2-4-like [Benincasa hispida])

HSP 1 Score: 530.0 bits (1364), Expect = 1.5e-146
Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

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BLAST of CsaV3_3G039740 vs. NCBI nr
Match: XP_008443195.1 (PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo] >ADN33986.1 40S ribosomal protein s2 [Cucumis melo subsp. melo] >KAA0053922.1 40S ribosomal protein S2-3-like [Cucumis melo var. makuwa] >TYK25482.1 40S ribosomal protein S2-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 528.9 bits (1361), Expect = 3.4e-146
Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

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BLAST of CsaV3_3G039740 vs. ExPASy Swiss-Prot
Match: Q9SCM3 (40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 7.2e-123
Identity = 224/257 (87.16%), Postives = 240/257 (93.39%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 144
           +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 145 HSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 204
           HSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 205 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAG 264
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 265 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFTK 324
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETRF+K
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSK 250

Query: 325 SPFQEHTD-LLAKPTVK 340
           SP+QEHTD LL  P VK
Sbjct: 251 SPYQEHTDFLLIPPGVK 265

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BLAST of CsaV3_3G039740 vs. ExPASy Swiss-Prot
Match: P49688 (40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2)

HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-122
Identity = 227/269 (84.39%), Postives = 242/269 (89.96%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 144
           ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 145 IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 204
           IYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 205 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 264
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 265 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETR 324
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 325 FTKSPFQEHTDLLAKPTVKALLLEDPDRV 350
           F++SP+QEHTD LA    KAL    PD V
Sbjct: 255 FSRSPYQEHTDFLAS---KALSTSKPDPV 280

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy Swiss-Prot
Match: Q8L8Y0 (40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2)

HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-119
Identity = 220/260 (84.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 144
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 145 IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 204
           IYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 205 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 264
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 265 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETR 324
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 325 FTKSPFQEHTDLLAKPTVKA 341
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy Swiss-Prot
Match: Q93VB8 (40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-119
Identity = 220/260 (84.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 144
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 145 IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 204
           IYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 205 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 264
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 265 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETR 324
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 325 FTKSPFQEHTDLLAKPTVKA 341
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy Swiss-Prot
Match: P49154 (40S ribosomal protein S2 OS=Urechis caupo OX=6431 GN=RPS2 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 4.5e-101
Identity = 186/251 (74.10%), Postives = 215/251 (85.66%), Query Frame = 0


Query: 86  RGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH 145
           RGGF  GFGGRGRG G  RGRG  R  G +D +++WVPVTKLGRLVK+ KI++LE+IYL 
Sbjct: 11  RGGFRGGFGGRGRGRGRGRGRGRGRGRGAKDGDKEWVPVTKLGRLVKDMKIKTLEEIYLF 70

Query: 146 SLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 205
           SLPIKE +I+D  +G +LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCS
Sbjct: 71  SLPIKEFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCS 130

Query: 206 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGI 265
           KEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV VR++PAPRG GI
Sbjct: 131 KEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGI 190

Query: 266 VAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFTKS 325
           V+A VPKK+L  AGI+D +TS+RG T TLGNF KAT+  +  TY +LTP+ WRET FTKS
Sbjct: 191 VSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAKATYAAIAATYSYLTPDLWRETVFTKS 250

Query: 326 PFQEHTDLLAK 336
           P+QE+TD LAK
Sbjct: 251 PYQEYTDYLAK 261

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy TrEMBL
Match: A0A0A0LFC7 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=3 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 3.3e-147
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy TrEMBL
Match: A0A5D3DPL0 (40S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006280 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.7e-146
Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy TrEMBL
Match: E5GBY7 (40S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.7e-146
Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy TrEMBL
Match: A0A1S3B7F9 (40S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.7e-146
Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPDRVTA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CsaV3_3G039740 vs. ExPASy TrEMBL
Match: A0A6J1F4N7 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.8e-145
Identity = 264/269 (98.14%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 83  MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 142
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 143 LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 202
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 203 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 262
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180

Query: 263 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 322
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 323 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 352
           KSPFQEHTDLLAKPTVKALLLEDPD+V+A
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 269

[Close]

BLAST of CsaV3_3G039740 vs. TAIR 10
Match: AT3G57490.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 441.8 bits (1135), Expect = 5.1e-124
Identity = 224/257 (87.16%), Postives = 240/257 (93.39%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 144
           +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 145 HSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 204
           HSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 205 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAG 264
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 265 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFTK 324
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETRF+K
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSK 250

Query: 325 SPFQEHTD-LLAKPTVK 340
           SP+QEHTD LL  P VK
Sbjct: 251 SPYQEHTDFLLIPPGVK 265

[Close]

BLAST of CsaV3_3G039740 vs. TAIR 10
Match: AT2G41840.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 440.7 bits (1132), Expect = 1.1e-123
Identity = 227/269 (84.39%), Postives = 242/269 (89.96%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 144
           ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 145 IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 204
           IYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 205 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 264
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 265 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETR 324
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 325 FTKSPFQEHTDLLAKPTVKALLLEDPDRV 350
           F++SP+QEHTD LA    KAL    PD V
Sbjct: 255 FSRSPYQEHTDFLAS---KALSTSKPDPV 280

[Close]

BLAST of CsaV3_3G039740 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 431.0 bits (1107), Expect = 9.0e-121
Identity = 220/260 (84.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 144
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 145 IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 204
           IYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 205 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 264
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 265 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETR 324
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 325 FTKSPFQEHTDLLAKPTVKA 341
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CsaV3_3G039740 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 431.0 bits (1107), Expect = 9.0e-121
Identity = 220/260 (84.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 144
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 145 IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 204
           IYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 205 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 264
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 265 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETR 324
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 325 FTKSPFQEHTDLLAKPTVKA 341
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CsaV3_3G039740 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 431.0 bits (1107), Expect = 9.0e-121
Identity = 220/260 (84.62%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 85  ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 144
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 145 IYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 204
           IYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 205 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 264
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 265 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETR 324
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL +TYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 325 FTKSPFQEHTDLLAKPTVKA 341
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

The following BLAST results are available for this feature:

BLAST of CsaV3_3G039740 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59555.2	2.5e-197	100.00	hypothetical protein Csa_001030 [Cucumis sativus]	[more]
KAG7017612.1	7.4e-149	90.20	40S ribosomal protein S2-3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011652156.1	6.9e-147	100.00	40S ribosomal protein S2-4 [Cucumis sativus]	[more]
XP_038906344.1	1.5e-146	99.63	40S ribosomal protein S2-4-like [Benincasa hispida]	[more]
XP_008443195.1	3.4e-146	99.26	PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo] >ADN33986.1 40S riboso...	[more]

BLAST of CsaV3_3G039740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCM3	7.2e-123	87.16	40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1	[more]
P49688	1.6e-122	84.39	40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2	[more]
Q8L8Y0	1.3e-119	84.62	40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2	[more]
Q93VB8	1.3e-119	84.62	40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1	[more]
P49154	4.5e-101	74.10	40S ribosomal protein S2 OS=Urechis caupo OX=6431 GN=RPS2 PE=2 SV=1	[more]

BLAST of CsaV3_3G039740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFC7	3.3e-147	100.00	S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=...	[more]
A0A5D3DPL0	1.7e-146	99.26	40S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
E5GBY7	1.7e-146	99.26	40S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3B7F9	1.7e-146	99.26	40S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=...	[more]
A0A6J1F4N7	1.8e-145	98.14	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE...	[more]

BLAST of CsaV3_3G039740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57490.1	5.1e-124	87.16	Ribosomal protein S5 family protein	[more]
AT2G41840.1	1.1e-123	84.39	Ribosomal protein S5 family protein	[more]
AT1G58983.1	9.0e-121	84.62	Ribosomal protein S5 family protein	[more]
AT1G59359.1	9.0e-121	84.62	Ribosomal protein S5 family protein	[more]
AT1G58380.1	9.0e-121	84.62	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 245..311 e-value: 2.7E-23 score: 81.2
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAM	TIGR01020	TIGR01020	coord: 115..322 e-value: 2.7E-93 score: 309.2
None	No IPR available	GENE3D	3.30.160.20		coord: 119..224 e-value: 1.8E-55 score: 187.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..117
None	No IPR available	PANTHER	PTHR13718:SF101	40S RIBOSOMAL PROTEIN S2-1-RELATED	coord: 84..348
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 158..227
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 162..226 e-value: 1.1E-29 score: 102.2
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 162..225 score: 22.755819
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 225..318 e-value: 6.8E-50 score: 169.1
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 84..348
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 179..211
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 238..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G039740.1	CsaV3_3G039740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome