
CsaV3_3G039610 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATGTTTGGTTCAAATTAAACCTCTATAAAAATTCGAAGTTCGAGGTTTCGTTACTCACTCCATTGTTCTACTAAAAAGAAATGAAGAATTTACTAAAGGGGAGAAGTTGTTTGTTGAATAGTCAACCACGAAGCGGGTAGGTAAAGGATTCTTTCATGGTTGGTGGAGTGATTGTTCTATCTTCATAGTCAGCCCACCGGAAGTCTAATGCTTCGGCAAGATAATAGCAAGCCTCAAACGAAGAAATGGAGTTCTATTGGAAATCGGCGATGGAGCAGATCACTTGGTATACCGGGCTATCCCCAACGGCCTTCTTCACCATACTTGCTGCAATGATCTTCGTGTTTCAAATGGTTTCCTCCATGTTTGTTTCTCCAGAAGAGTTTAATAAGCCCCCAACTGTTGCGATTTCTTCGTCTAACTCATCCAACTCCAATCTGTTTGTCAATGATTCGGGTGCAGACGCCTCGCTAGCAGTCCAAGTCGGGCGATTGACGGAGCAGCAGTTGAGGGCTTACAATGGTTCTGATCCGAATAAGCCACTTCTTATGGCTATAAAGGGTCAAATCTACGATGTTTCTTCGGGCAGGTACTTTTTTTCTTCCTTTATTGTTCGTTGGAGTGTACTTTTGTTTGGTCTCTGGGGATTATTTACGAACTTGACTATATTGAATAGGAGTAGTTGCTTAGTTTCTGGAGTTGCAGCTTGAATCAATGTTCTAGATGGGTAATTACTTCTTTTAATATCATCAACGGAGTTTAGGAACTGCACAATAATAACGATAACCGACCGATCAGTGTAATTTGTTCAGGGATGCATCAATCCCTTTACACTACTGTCCACCTGCAACTTTTCATATGGTCATCTGTTAAGTATTCGTATAGGAAAAATTAGAAACCATCATTATAAGATTTTTGAGCTGATGCCAATTAATTTTGAGATTGAACCCATGTCATCTCATTTGGTAGTAGAGCCTTTGAAGCCTTAAATGGGTATTTGGTCCACAAAAAGGAATTGGGATATGATTTAAAAGTGATGAGCCACATCTTGAGGGGGATGTCATGTAAGGCACTTTCTAATATCTGTTCCACGTCAAGGTTTCACTGGTAATGTCTTGAACGATTTAAGATGTTTGCCTGAAATTTTTAAGAAGCAAATGTTTTTGCACGAAATATGTATGTGAAAGGAGTGGCAGGCCTTCCATTCTCTTTACTTATGTGAGAAGAAGGGTGGTAGGGACTAAAGAATGAAAGAGAATGGAAGGTGGGCTGAATGGGAGTGTGTGTTAATTGTAGACAAATTTTAAGTCAGTCAATTGGTCTGTCAAGGAATATTAAAGTGAAGCAGTTTAAGAACATTTGGGGTTCGGAAGCCTCCCCATATTTATTTAATATATGCCTGGATTTCTCAAGTGAATGAATTATAGAGGATAGCATATAGCATAAAAAATGGGTTTCTTTAGCTGAGCTTAATATAGCCTATGAAAGTAGTGAGTTCGTGGATTGAAATAAGCAAACACAGATATCAAGTATAGACTTGCTTCTTACCCTCGCAGAAGTTATTTTGGGGCGGGGTAAATGGAGTGATGGTTGGTGTTTGATATAACTTTTATAGAATTTGGGTTATTATTTCGTTAGCTTACATACTTTGTTGTTGTTTCGTTCCTATGCTTTCACTAGCCTCTAAATAGTACCTAAGTTCCATGTCAGTGGGTGTCCAAACCAGTTTCCCTTGCAACTAATTTTACCAAGCAACAATTTCACTTGAGCCATAATTTTAACAAGACCGCCTGCCATTAACATCCCAACCCAACTAAATCTCTCAAATCTAGTTTGTTCGTTATTACCTGTTCAATTTTGATCCATCCGATTGACTTTCCATGTACACGACCTTAATAACTGTTTTCAAGAGCAGAGACTTGAGTCACTTGACAATCCTAATTCTCTACGTAATTGAAGCTTCTTAGATTTCAAAGAATAAATACAGCCCAAATTTACATGAATGAAATATGTAACTTGACCTTAGTATTAAAGTTGTCGTTGATTTTTGGTTGGCTTGATGGTCAGGATGTTTTACGGTCCTGGTTCACCGTACTCTATGTTCGTCGGAAAGGATGCCAGCCGAGCCTTGGCTCTCTTATCTTTCAAACCTGAGGACATCAATGGTAACATCGAAGGTCTGAATGAAGAAGAGCTTGTAATCTTGCAGGACTGGGAATACAAGTTCATGGAAAAGTATGTAAAAGTTGGGGAGCTTGTTCCAGAGGGAGAATTGAATGAGCATTCTGAAAATGGACACCAAAATTCCGAAACCACGCAAGAAGAACACGACAAAGATCAGTAAGAAGATGTTTATAATTTCCATCTTTTGATCAGGTAGATCTCAGAAGATTCATTCTAAATCTCATGATGCTGTTGAGTGTGCAAGTCCTTTGTCTTGTTCCTCCTGATCTAGTGAAGCTGTGGCCTTCTTTGAGCATACATAAAAAATTGCAAGTAGAAGAAATCAATATGATTGAAGTTAGAAATTCTGCTACCTTTGGGCTAGACTTTTGCCTGTTTTGTTTGTATATTGTTTTGAGACTAGACTTTTATAACACTAATGAGTATATTATTTTATTTCATAGGTTTTACCCATAAATGTAAATGTTCTTCATGCGAACATTGATCTGAAGTGCATATACATGTAACTTATTTTAGTATCTATATTTTCCATAAATCTTAAAATTAACTTTCTAGCTAGTTTCATT ATGGAGTTCTATTGGAAATCGGCGATGGAGCAGATCACTTGGTATACCGGGCTATCCCCAACGGCCTTCTTCACCATACTTGCTGCAATGATCTTCGTGTTTCAAATGGTTTCCTCCATGTTTGTTTCTCCAGAAGAGTTTAATAAGCCCCCAACTGTTGCGATTTCTTCGTCTAACTCATCCAACTCCAATCTGTTTGTCAATGATTCGGGTGCAGACGCCTCGCTAGCAGTCCAAGTCGGGCGATTGACGGAGCAGCAGTTGAGGGCTTACAATGGTTCTGATCCGAATAAGCCACTTCTTATGGCTATAAAGGGTCAAATCTACGATGTTTCTTCGGGCAGGATGTTTTACGGTCCTGGTTCACCGTACTCTATGTTCGTCGGAAAGGATGCCAGCCGAGCCTTGGCTCTCTTATCTTTCAAACCTGAGGACATCAATGGTAACATCGAAGGTCTGAATGAAGAAGAGCTTGTAATCTTGCAGGACTGGGAATACAAGTTCATGGAAAAGTATGTAAAAGTTGGGGAGCTTGTTCCAGAGGGAGAATTGAATGAGCATTCTGAAAATGGACACCAAAATTCCGAAACCACGCAAGAAGAACACGACAAAGATCAGTAA ATGGAGTTCTATTGGAAATCGGCGATGGAGCAGATCACTTGGTATACCGGGCTATCCCCAACGGCCTTCTTCACCATACTTGCTGCAATGATCTTCGTGTTTCAAATGGTTTCCTCCATGTTTGTTTCTCCAGAAGAGTTTAATAAGCCCCCAACTGTTGCGATTTCTTCGTCTAACTCATCCAACTCCAATCTGTTTGTCAATGATTCGGGTGCAGACGCCTCGCTAGCAGTCCAAGTCGGGCGATTGACGGAGCAGCAGTTGAGGGCTTACAATGGTTCTGATCCGAATAAGCCACTTCTTATGGCTATAAAGGGTCAAATCTACGATGTTTCTTCGGGCAGGATGTTTTACGGTCCTGGTTCACCGTACTCTATGTTCGTCGGAAAGGATGCCAGCCGAGCCTTGGCTCTCTTATCTTTCAAACCTGAGGACATCAATGGTAACATCGAAGGTCTGAATGAAGAAGAGCTTGTAATCTTGCAGGACTGGGAATACAAGTTCATGGAAAAGTATGTAAAAGTTGGGGAGCTTGTTCCAGAGGGAGAATTGAATGAGCATTCTGAAAATGGACACCAAAATTCCGAAACCACGCAAGAAGAACACGACAAAGATCAGTAA MEFYWKSAMEQITWYTGLSPTAFFTILAAMIFVFQMVSSMFVSPEEFNKPPTVAISSSNSSNSNLFVNDSGADASLAVQVGRLTEQQLRAYNGSDPNKPLLMAIKGQIYDVSSGRMFYGPGSPYSMFVGKDASRALALLSFKPEDINGNIEGLNEEELVILQDWEYKFMEKYVKVGELVPEGELNEHSENGHQNSETTQEEHDKDQ* Homology
BLAST of CsaV3_3G039610 vs. NCBI nr
Match: XP_004136607.1 (membrane steroid-binding protein 2 [Cucumis sativus] >KGN59383.1 hypothetical protein Csa_000920 [Cucumis sativus]) HSP 1 Score: 404.1 bits (1037), Expect = 7.5e-109 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. NCBI nr
Match: XP_008443179.1 (PREDICTED: membrane steroid-binding protein 2-like [Cucumis melo] >ADN33977.1 steroid binding protein [Cucumis melo subsp. melo] >KAA0053933.1 membrane steroid-binding protein 2-like [Cucumis melo var. makuwa] >TYK25471.1 membrane steroid-binding protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 387.5 bits (994), Expect = 7.2e-104 Identity = 198/206 (96.12%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. NCBI nr
Match: XP_038903009.1 (membrane steroid-binding protein 2-like [Benincasa hispida]) HSP 1 Score: 365.2 bits (936), Expect = 3.8e-97 Identity = 191/206 (92.72%), Postives = 193/206 (93.69%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. NCBI nr
Match: XP_022971619.1 (membrane steroid-binding protein 2-like [Cucurbita maxima]) HSP 1 Score: 344.4 bits (882), Expect = 7.0e-91 Identity = 179/207 (86.47%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. NCBI nr
Match: XP_022152070.1 (membrane steroid-binding protein 2-like [Momordica charantia]) HSP 1 Score: 344.4 bits (882), Expect = 7.0e-91 Identity = 179/206 (86.89%), Postives = 190/206 (92.23%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy Swiss-Prot
Match: Q9M2Z4 (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.1e-45 Identity = 101/186 (54.30%), Postives = 124/186 (66.67%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy Swiss-Prot
Match: Q9FVZ7 (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 4.1e-41 Identity = 89/172 (51.74%), Postives = 113/172 (65.70%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy Swiss-Prot
Match: Q9XFM6 (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2) HSP 1 Score: 164.9 bits (416), Expect = 1.0e-39 Identity = 90/200 (45.00%), Postives = 120/200 (60.00%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy Swiss-Prot
Match: Q9FVZ9 (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.1e-33 Identity = 78/160 (48.75%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy Swiss-Prot
Match: Q9SK39 (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24 Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy TrEMBL
Match: A0A0A0LC44 (Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G815470 PE=4 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.6e-109 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy TrEMBL
Match: A0A5A7UDA3 (Membrane steroid-binding protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006170 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104 Identity = 198/206 (96.12%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy TrEMBL
Match: E5GBX8 (Steroid binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104 Identity = 198/206 (96.12%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy TrEMBL
Match: A0A1S3B7E4 (membrane steroid-binding protein 2-like OS=Cucumis melo OX=3656 GN=LOC103486840 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104 Identity = 198/206 (96.12%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. ExPASy TrEMBL
Match: A0A6J1I932 (membrane steroid-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470292 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.4e-91 Identity = 179/207 (86.47%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. TAIR 10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3 ) HSP 1 Score: 183.7 bits (465), Expect = 1.5e-46 Identity = 101/186 (54.30%), Postives = 124/186 (66.67%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. TAIR 10
Match: AT5G52240.1 (membrane steroid binding protein 1 ) HSP 1 Score: 164.9 bits (416), Expect = 7.1e-41 Identity = 90/200 (45.00%), Postives = 120/200 (60.00%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. TAIR 10
Match: AT5G52240.2 (membrane steroid binding protein 1 ) HSP 1 Score: 164.5 bits (415), Expect = 9.3e-41 Identity = 85/178 (47.75%), Postives = 110/178 (61.80%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. TAIR 10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2 ) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25 Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of CsaV3_3G039610 vs. TAIR 10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4 ) HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15 Identity = 34/94 (36.17%), Postives = 56/94 (59.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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