Homology
BLAST of CsaV3_3G039550 vs. NCBI nr
Match:
XP_031737800.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis sativus] >KGN59527.2 hypothetical protein Csa_002607 [Cucumis sativus])
HSP 1 Score: 1220.3 bits (3156), Expect = 0.0e+00
Identity = 604/604 (100.00%), Postives = 604/604 (100.00%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY
Sbjct: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
Query: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA
Sbjct: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
Query: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS
Sbjct: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
Query: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR
Sbjct: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
Query: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL
Sbjct: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
Query: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY 360
DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY
Sbjct: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY 360
Query: 361 AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL
Sbjct: 361 AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
Query: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI
Sbjct: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
Query: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI
Sbjct: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
Query: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 600
RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS
Sbjct: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 600
Query: 601 TFCI 605
TFCI
Sbjct: 601 TFCI 604
BLAST of CsaV3_3G039550 vs. NCBI nr
Match:
KAA0053939.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25465.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 563/604 (93.21%), Postives = 587/604 (97.19%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
MNSL+LHLF HSL+SCKS+SHLKQIHGVAIKTPSLSLPNLIPKLIFL SSSSSSSPDLFY
Sbjct: 1 MNSLELHLFPHSLHSCKSLSHLKQIHGVAIKTPSLSLPNLIPKLIFL-SSSSSSSPDLFY 60
Query: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
IRSILLTHSHDAQF L+LCNAI+RSISRNS NL+PMEFLNEML++GLEPDGFT+PLVLKA
Sbjct: 61 IRSILLTHSHDAQFRLNLCNAIVRSISRNSTNLTPMEFLNEMLLIGLEPDGFTLPLVLKA 120
Query: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
LA +GIREGQQIHARSIKTGMVG NVYV+NTLMRLYSVCGSIHDVQKVFDECPHRDLVS
Sbjct: 121 LARTRGIREGQQIHARSIKTGMVGLNVYVTNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
Query: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
WT LIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR
Sbjct: 181 WTILIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
Query: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
+YIDM ADVFVGNAL+DMYLKCDDLNSA KVFDEMPV+NVVTWNAMISGLAYQGRYREAL
Sbjct: 241 YYIDMNADVFVGNALIDMYLKCDDLNSANKVFDEMPVRNVVTWNAMISGLAYQGRYREAL 300
Query: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY 360
DTFR+MQ+KGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILAD+FVGNALLDMY
Sbjct: 301 DTFRIMQNKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADEFVGNALLDMY 360
Query: 361 AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
AKCGSIDEAFRVFESMK+RDVYSYTAMI GLALHGEANWAFQVFSEMFRVGIEPNEVTFL
Sbjct: 361 AKCGSIDEAFRVFESMKKRDVYSYTAMIVGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
Query: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
GLLMACSHGGLVAEGKKYFF+MSDKYKLRPQ+EHYGCMIDLLGR GLVKEAEEI+HKMEI
Sbjct: 421 GLLMACSHGGLVAEGKKYFFEMSDKYKLRPQSEHYGCMIDLLGRVGLVKEAEEIVHKMEI 480
Query: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
RPDVFACGALLGACRIHGNVDIGESVMQKLTE+DPDE+GTYILMTNLYSSVHRWKDA K+
Sbjct: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTEIDPDEDGTYILMTNLYSSVHRWKDASKL 540
Query: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 600
RKTMK KKMRKTPGCS IEVDGVVHEFRKGDKSHPRSKVIY VLEGIATHLKSYGI EHS
Sbjct: 541 RKTMKIKKMRKTPGCSSIEVDGVVHEFRKGDKSHPRSKVIYFVLEGIATHLKSYGIVEHS 600
Query: 601 TFCI 605
TFCI
Sbjct: 601 TFCI 603
BLAST of CsaV3_3G039550 vs. NCBI nr
Match:
XP_031737802.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X2 [Cucumis sativus])
HSP 1 Score: 1132.5 bits (2928), Expect = 0.0e+00
Identity = 571/604 (94.54%), Postives = 571/604 (94.54%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY
Sbjct: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
Query: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA
Sbjct: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
Query: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS
Sbjct: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
Query: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR
Sbjct: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
Query: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL
Sbjct: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
Query: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY 360
DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLE
Sbjct: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLE---------------------------- 360
Query: 361 AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
IDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL
Sbjct: 361 -----IDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
Query: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI
Sbjct: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
Query: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI
Sbjct: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
Query: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 600
RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS
Sbjct: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 571
Query: 601 TFCI 605
TFCI
Sbjct: 601 TFCI 571
BLAST of CsaV3_3G039550 vs. NCBI nr
Match:
XP_038902993.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 1057.0 bits (2732), Expect = 6.2e-305
Identity = 527/604 (87.25%), Postives = 558/604 (92.38%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPN--LIPKLIFLSSSSSSSSPDL 60
MNS +LHL HSL+SCKSI+HLKQIHGVAIK PSLSLPN L PKLI LSSS S DL
Sbjct: 1 MNSQELHLLPHSLHSCKSITHLKQIHGVAIKIPSLSLPNKFLFPKLISLSSSFS----DL 60
Query: 61 FYIRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVL 120
FYIRSILLTHS DAQF L+LCNAIIRSIS NS NL+ MEFL EML++GLEPDGFT+P VL
Sbjct: 61 FYIRSILLTHSPDAQFRLNLCNAIIRSISANSTNLAAMEFLKEMLLIGLEPDGFTLPHVL 120
Query: 121 KALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDL 180
KALA IQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCG I DVQK+FDECPHRDL
Sbjct: 121 KALARIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGFIDDVQKMFDECPHRDL 180
Query: 181 VSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSY 240
VSWTTLIQ FTKAGLY RAV AF+EMCDL+LRADGRTLVVVLSACSNLGDLNLG+KVHSY
Sbjct: 181 VSWTTLIQGFTKAGLYRRAVGAFVEMCDLKLRADGRTLVVVLSACSNLGDLNLGRKVHSY 240
Query: 241 IRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYRE 300
IRHYIDM ADVFVGNAL+DMYLKCDDL SA KVFDEMPV+NVVTWNAMISGLAYQGRYRE
Sbjct: 241 IRHYIDMNADVFVGNALIDMYLKCDDLISANKVFDEMPVRNVVTWNAMISGLAYQGRYRE 300
Query: 301 ALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLD 360
ALDTFRMMQ+KG KPDEVTLVGVLNSCANLGVLE+GKWVHAY+RRNHILADKFVGNALLD
Sbjct: 301 ALDTFRMMQNKGPKPDEVTLVGVLNSCANLGVLELGKWVHAYIRRNHILADKFVGNALLD 360
Query: 361 MYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVT 420
MYAKCG IDE+F VFESMKRRDVYSYTAMI GLALHGEANWAFQVFSEM VGIEPNEVT
Sbjct: 361 MYAKCGRIDESFSVFESMKRRDVYSYTAMIVGLALHGEANWAFQVFSEMIGVGIEPNEVT 420
Query: 421 FLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKM 480
FLGLLMACSHGGLVAEGKKYFF+MS+ YKLRPQ EHYGCMIDLLGRAGLVKEAEEI+HKM
Sbjct: 421 FLGLLMACSHGGLVAEGKKYFFEMSNTYKLRPQTEHYGCMIDLLGRAGLVKEAEEIVHKM 480
Query: 481 EIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDAL 540
EIRPD A GALLGAC+I+GNVDIGESVMQKLT+LDP+E GTYILMTNLYSSV RW+DAL
Sbjct: 481 EIRPDAIAWGALLGACKIYGNVDIGESVMQKLTDLDPNENGTYILMTNLYSSVQRWRDAL 540
Query: 541 KIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEE 600
K+RKTMK+KKMRK+PGCSLIEVDG VHEFRKGDKSHP+SKVIY VLEGI THLKSYGI E
Sbjct: 541 KLRKTMKSKKMRKSPGCSLIEVDGGVHEFRKGDKSHPKSKVIYSVLEGIGTHLKSYGIVE 600
Query: 601 HSTF 603
+STF
Sbjct: 601 YSTF 600
BLAST of CsaV3_3G039550 vs. NCBI nr
Match:
XP_016899770.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Cucumis melo])
HSP 1 Score: 1006.1 bits (2600), Expect = 1.3e-289
Identity = 508/604 (84.11%), Postives = 530/604 (87.75%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
MNSL+LHLF HSL+SCKS+SHLKQIHGVAIKTPSLSLPNLIPKLIFL SSSSSSSPDLFY
Sbjct: 1 MNSLELHLFPHSLHSCKSLSHLKQIHGVAIKTPSLSLPNLIPKLIFL-SSSSSSSPDLFY 60
Query: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
IRSILLTHSHDAQF L+LCNAI+RSISRNS NL+PMEFLNEML++GLEPDGFT+PLVLKA
Sbjct: 61 IRSILLTHSHDAQFRLNLCNAIVRSISRNSTNLTPMEFLNEMLLIGLEPDGFTLPLVLKA 120
Query: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
LA +GIREGQQIHARSIKTGMVG NVYV+NTLMRLYSVCGSIHDVQKVFDECPHRDLVS
Sbjct: 121 LARTRGIREGQQIHARSIKTGMVGLNVYVTNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
Query: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
WT LIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR
Sbjct: 181 WTILIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
Query: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
+YIDM ADVFVGNAL+DMYLKCDDLNSA KVFDEMPV+NVVTWNAMISGLAYQGRYREAL
Sbjct: 241 YYIDMNADVFVGNALIDMYLKCDDLNSANKVFDEMPVRNVVTWNAMISGLAYQGRYREAL 300
Query: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY 360
DTFR+MQ+KGVKPDEVTLVGVLNSCANLGVLEI
Sbjct: 301 DTFRIMQNKGVKPDEVTLVGVLNSCANLGVLEI--------------------------- 360
Query: 361 AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
ALHGEANWAFQVFSEMFRVGIEPNEVTFL
Sbjct: 361 -------------------------------ALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
Query: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
GLLMACSHGGLVAEGKKYFF+MSDKYKLRPQ+EHYGCMIDLLGR GLVKEAEEI+HKMEI
Sbjct: 421 GLLMACSHGGLVAEGKKYFFEMSDKYKLRPQSEHYGCMIDLLGRVGLVKEAEEIVHKMEI 480
Query: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
RPDVFACGALLGACRIHGNVDIGESVMQKLTE+DPDE+GTYILMTNLYSSVHRWKDA K+
Sbjct: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTEIDPDEDGTYILMTNLYSSVHRWKDASKL 540
Query: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 600
RKTMK KKMRKTPGCS IEVDGVVHEFRKGDKSHPRSKVIY VLEGIATHLKSYGI EHS
Sbjct: 541 RKTMKIKKMRKTPGCSSIEVDGVVHEFRKGDKSHPRSKVIYFVLEGIATHLKSYGIVEHS 545
Query: 601 TFCI 605
TFCI
Sbjct: 601 TFCI 545
BLAST of CsaV3_3G039550 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 2.0e-125
Identity = 236/627 (37.64%), Postives = 371/627 (59.17%), Query Frame = 0
Query: 2 NSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYI 61
+S++ H L++CK++ L+ IH IK + + KLI S L Y
Sbjct: 29 DSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE-GLPYA 88
Query: 62 RSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKAL 121
S+ T L + N + R + +S +S ++ M+ +GL P+ +T P VLK+
Sbjct: 89 ISVFKTIQEPN---LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 148
Query: 122 ALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHR----- 181
A + +EGQQIH +K G ++YV +L+ +Y G + D KVFD+ PHR
Sbjct: 149 AKSKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 208
Query: 182 --------------------------DLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLR 241
D+VSW +I + + G Y A+E F +M +R
Sbjct: 209 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 268
Query: 242 ADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYK 301
D T+V V+SAC+ G + LG++VH +I + +++ + NAL+D+Y KC +L +A
Sbjct: 269 PDESTMVTVVSACAQSGSIELGRQVHLWIDDH-GFGSNLKIVNALIDLYSKCGELETACG 328
Query: 302 VFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGV 361
+F+ +P K+V++WN +I G + Y+EAL F+ M G P++VT++ +L +CA+LG
Sbjct: 329 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 388
Query: 362 LEIGKWVHAYM--RRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMI 421
++IG+W+H Y+ R + + +L+DMYAKCG I+ A +VF S+ + + S+ AMI
Sbjct: 389 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 448
Query: 422 FGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKL 481
FG A+HG A+ +F +FS M ++GI+P+++TF+GLL ACSH G++ G+ F M+ YK+
Sbjct: 449 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 508
Query: 482 RPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQ 541
P+ EHYGCMIDLLG +GL KEAEE+I+ ME+ PD +LL AC++HGNV++GES +
Sbjct: 509 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 568
Query: 542 KLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFR 596
L +++P+ G+Y+L++N+Y+S RW + K R + +K M+K PGCS IE+D VVHEF
Sbjct: 569 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 628
BLAST of CsaV3_3G039550 vs. ExPASy Swiss-Prot
Match:
Q9C866 (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E55 PE=2 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 5.0e-116
Identity = 217/546 (39.74%), Postives = 326/546 (59.71%), Query Frame = 0
Query: 76 LSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHA 135
L + N +++S++ + E+ GL PD FT+P+VLK++ ++ + EG+++H
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 136 RSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYS 195
++K G+ F+ YVSN+LM +Y+ G I KVFDE P RD+VSW LI ++ G +
Sbjct: 71 YAVKAGL-EFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 130
Query: 196 RAVEAFMEMC-DLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNA 255
A+ F M + L+ D T+V LSACS L +L +G++++ ++ + + V +GNA
Sbjct: 131 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV--VTEFEMSVRIGNA 190
Query: 256 LLDMYLKCDDLNSAYKVFDEM-------------------------------PVKNVVTW 315
L+DM+ KC L+ A VFD M PVK+VV W
Sbjct: 191 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 250
Query: 316 NAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRR 375
AM++G R+ EAL+ FR MQ G++PD LV +L CA G LE GKW+H Y+
Sbjct: 251 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 310
Query: 376 NHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQV 435
N + DK VG AL+DMYAKCG I+ A VF +K RD S+T++I+GLA++G + A +
Sbjct: 311 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 370
Query: 436 FSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLG 495
+ EM VG+ + +TF+ +L AC+HGG VAEG+K F M++++ ++P++EH C+IDLL
Sbjct: 371 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 430
Query: 496 RAGLVKEAEEIIHKMEIRPD---VFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGT 555
RAGL+ EAEE+I KM D V +LL A R +GNV I E V +KL +++ +
Sbjct: 431 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 490
Query: 556 YILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDK--SHPRSK 585
+ L+ ++Y+S +RW+D +R+ MK+ +RK PGCS IE+DGV HEF GD SHP+
Sbjct: 491 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 550
BLAST of CsaV3_3G039550 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 416.4 bits (1069), Expect = 5.6e-115
Identity = 229/617 (37.12%), Postives = 342/617 (55.43%), Query Frame = 0
Query: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYIRSILLTHSHDA 72
L CK + HLKQI I + P +LI + S S D Y IL +
Sbjct: 60 LEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLD--YSVKILKGIENPN 119
Query: 73 QFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGL---EPDGFTIPLVLKALALIQGIRE 132
F N IR S + +ML G PD FT P++ K A ++
Sbjct: 120 IFS---WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 179
Query: 133 GQQI--HARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQA 192
G I H ++ +V +V N + +++ CG + + +KVFDE P RDLVSW LI
Sbjct: 180 GHMILGHVLKLRLELVS---HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 239
Query: 193 FTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKA 252
+ K G +A+ + M ++ D T++ ++S+CS LGDLN G++ + Y++ ++
Sbjct: 240 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRM 299
Query: 253 DVFVGNALLDMYLKCDDLNSA-------------------------------YKVFDEMP 312
+ + NAL+DM+ KC D++ A K+FD+M
Sbjct: 300 TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 359
Query: 313 VKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKW 372
K+VV WNAMI G R ++AL F+ MQ KPDE+T++ L++C+ LG L++G W
Sbjct: 360 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 419
Query: 373 VHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGE 432
+H Y+ + + + +G +L+DMYAKCG+I EA VF ++ R+ +YTA+I GLALHG+
Sbjct: 420 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 479
Query: 433 ANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYG 492
A+ A F+EM GI P+E+TF+GLL AC HGG++ G+ YF QM ++ L PQ +HY
Sbjct: 480 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 539
Query: 493 CMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPD 552
M+DLLGRAGL++EA+ ++ M + D GALL CR+HGNV++GE +KL ELDP
Sbjct: 540 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 599
Query: 553 EEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPR 594
+ G Y+L+ +Y + W+DA + R+ M + + K PGCS IEV+G+V EF DKS P
Sbjct: 600 DSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPE 659
BLAST of CsaV3_3G039550 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 412.9 bits (1060), Expect = 6.2e-114
Identity = 221/618 (35.76%), Postives = 355/618 (57.44%), Query Frame = 0
Query: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYIRSILLTHSHDA 72
+ C S+ LKQ HG I+T + S P KL +++ SS +S L Y R +
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS--LEYARKVFDEIPKPN 96
Query: 73 QFCLSLCNAIIRS-ISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQ 132
F N +IR+ S LS FL+ + P+ +T P ++KA A + + GQ
Sbjct: 97 SFA---WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 156
Query: 133 QIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKA 192
+H ++K+ VG +V+V+N+L+ Y CG + KVF +D+VSW ++I F +
Sbjct: 157 SLHGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 216
Query: 193 GLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFV 252
G +A+E F +M ++A T+V VLSAC+ + +L G++V SYI + ++ +
Sbjct: 217 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLTL 276
Query: 253 GNALLDMYLKCDDLNSAYKVFD-------------------------------EMPVKNV 312
NA+LDMY KC + A ++FD MP K++
Sbjct: 277 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 336
Query: 313 VTWNAMISGLAYQGRYREALDTFRMMQ-DKGVKPDEVTLVGVLNSCANLGVLEIGKWVHA 372
V WNA+IS G+ EAL F +Q K +K +++TLV L++CA +G LE+G+W+H+
Sbjct: 337 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 396
Query: 373 YMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANW 432
Y++++ I + V +AL+ MY+KCG ++++ VF S+++RDV+ ++AMI GLA+HG N
Sbjct: 397 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 456
Query: 433 AFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMI 492
A +F +M ++PN VTF + ACSH GLV E + F QM Y + P+ +HY C++
Sbjct: 457 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 516
Query: 493 DLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEG 552
D+LGR+G +++A + I M I P GALLGAC+IH N+++ E +L EL+P +G
Sbjct: 517 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 576
Query: 553 TYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKV 598
++L++N+Y+ + +W++ ++RK M+ ++K PGCS IE+DG++HEF GD +HP S+
Sbjct: 577 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 636
BLAST of CsaV3_3G039550 vs. ExPASy Swiss-Prot
Match:
O23337 (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 411.8 bits (1057), Expect = 1.4e-113
Identity = 219/613 (35.73%), Postives = 352/613 (57.42%), Query Frame = 0
Query: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYIRSILLTHSHDA 72
L+ CKS++H+KQ+H ++T + + + +F + S SSSS +L Y ++ +
Sbjct: 19 LSFCKSLNHIKQLHAHILRT---VINHKLNSFLF-NLSVSSSSINLSYALNVFSSIPSPP 78
Query: 73 QFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQ 132
+ + N +R +SR+S + + F + VG D F+ +LKA++ + + EG +
Sbjct: 79 ESI--VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 138
Query: 133 IHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAG 192
+H + K + + +V M +Y+ CG I+ + VFDE HRD+V+W T+I+ + + G
Sbjct: 139 LHGVAFKIATL-CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 198
Query: 193 LYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYI--------RHYI- 252
L A + F EM D + D L ++SAC G++ + ++ ++ H +
Sbjct: 199 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 258
Query: 253 ------------DMKAD---------VFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVT 312
DM + +FV A++ Y KC L+ A +FD+ K++V
Sbjct: 259 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 318
Query: 313 WNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMR 372
W MIS +EAL F M G+KPD V++ V+++CANLG+L+ KWVH+ +
Sbjct: 319 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 378
Query: 373 RNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQ 432
N + ++ + NAL++MYAKCG +D VFE M RR+V S+++MI L++HGEA+ A
Sbjct: 379 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 438
Query: 433 VFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLL 492
+F+ M + +EPNEVTF+G+L CSH GLV EGKK F M+D+Y + P+ EHYGCM+DL
Sbjct: 439 LFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF 498
Query: 493 GRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYI 552
GRA L++EA E+I M + +V G+L+ ACRIHG +++G+ +++ EL+PD +G +
Sbjct: 499 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALV 558
Query: 553 LMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYL 596
LM+N+Y+ RW+D IR+ M+ K + K G S I+ +G HEF GDK H +S IY
Sbjct: 559 LMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYA 618
BLAST of CsaV3_3G039550 vs. ExPASy TrEMBL
Match:
A0A5A7UKB6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006110 PE=4 SV=1)
HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 563/604 (93.21%), Postives = 587/604 (97.19%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
MNSL+LHLF HSL+SCKS+SHLKQIHGVAIKTPSLSLPNLIPKLIFL SSSSSSSPDLFY
Sbjct: 1 MNSLELHLFPHSLHSCKSLSHLKQIHGVAIKTPSLSLPNLIPKLIFL-SSSSSSSPDLFY 60
Query: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
IRSILLTHSHDAQF L+LCNAI+RSISRNS NL+PMEFLNEML++GLEPDGFT+PLVLKA
Sbjct: 61 IRSILLTHSHDAQFRLNLCNAIVRSISRNSTNLTPMEFLNEMLLIGLEPDGFTLPLVLKA 120
Query: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
LA +GIREGQQIHARSIKTGMVG NVYV+NTLMRLYSVCGSIHDVQKVFDECPHRDLVS
Sbjct: 121 LARTRGIREGQQIHARSIKTGMVGLNVYVTNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
Query: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
WT LIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR
Sbjct: 181 WTILIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
Query: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
+YIDM ADVFVGNAL+DMYLKCDDLNSA KVFDEMPV+NVVTWNAMISGLAYQGRYREAL
Sbjct: 241 YYIDMNADVFVGNALIDMYLKCDDLNSANKVFDEMPVRNVVTWNAMISGLAYQGRYREAL 300
Query: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY 360
DTFR+MQ+KGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILAD+FVGNALLDMY
Sbjct: 301 DTFRIMQNKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADEFVGNALLDMY 360
Query: 361 AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
AKCGSIDEAFRVFESMK+RDVYSYTAMI GLALHGEANWAFQVFSEMFRVGIEPNEVTFL
Sbjct: 361 AKCGSIDEAFRVFESMKKRDVYSYTAMIVGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
Query: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
GLLMACSHGGLVAEGKKYFF+MSDKYKLRPQ+EHYGCMIDLLGR GLVKEAEEI+HKMEI
Sbjct: 421 GLLMACSHGGLVAEGKKYFFEMSDKYKLRPQSEHYGCMIDLLGRVGLVKEAEEIVHKMEI 480
Query: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
RPDVFACGALLGACRIHGNVDIGESVMQKLTE+DPDE+GTYILMTNLYSSVHRWKDA K+
Sbjct: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTEIDPDEDGTYILMTNLYSSVHRWKDASKL 540
Query: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 600
RKTMK KKMRKTPGCS IEVDGVVHEFRKGDKSHPRSKVIY VLEGIATHLKSYGI EHS
Sbjct: 541 RKTMKIKKMRKTPGCSSIEVDGVVHEFRKGDKSHPRSKVIYFVLEGIATHLKSYGIVEHS 600
Query: 601 TFCI 605
TFCI
Sbjct: 601 TFCI 603
BLAST of CsaV3_3G039550 vs. ExPASy TrEMBL
Match:
A0A1S4DVM9 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486837 PE=4 SV=1)
HSP 1 Score: 1006.1 bits (2600), Expect = 6.1e-290
Identity = 508/604 (84.11%), Postives = 530/604 (87.75%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFY 60
MNSL+LHLF HSL+SCKS+SHLKQIHGVAIKTPSLSLPNLIPKLIFL SSSSSSSPDLFY
Sbjct: 1 MNSLELHLFPHSLHSCKSLSHLKQIHGVAIKTPSLSLPNLIPKLIFL-SSSSSSSPDLFY 60
Query: 61 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 120
IRSILLTHSHDAQF L+LCNAI+RSISRNS NL+PMEFLNEML++GLEPDGFT+PLVLKA
Sbjct: 61 IRSILLTHSHDAQFRLNLCNAIVRSISRNSTNLTPMEFLNEMLLIGLEPDGFTLPLVLKA 120
Query: 121 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
LA +GIREGQQIHARSIKTGMVG NVYV+NTLMRLYSVCGSIHDVQKVFDECPHRDLVS
Sbjct: 121 LARTRGIREGQQIHARSIKTGMVGLNVYVTNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 180
Query: 181 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
WT LIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR
Sbjct: 181 WTILIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 240
Query: 241 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 300
+YIDM ADVFVGNAL+DMYLKCDDLNSA KVFDEMPV+NVVTWNAMISGLAYQGRYREAL
Sbjct: 241 YYIDMNADVFVGNALIDMYLKCDDLNSANKVFDEMPVRNVVTWNAMISGLAYQGRYREAL 300
Query: 301 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMY 360
DTFR+MQ+KGVKPDEVTLVGVLNSCANLGVLEI
Sbjct: 301 DTFRIMQNKGVKPDEVTLVGVLNSCANLGVLEI--------------------------- 360
Query: 361 AKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
ALHGEANWAFQVFSEMFRVGIEPNEVTFL
Sbjct: 361 -------------------------------ALHGEANWAFQVFSEMFRVGIEPNEVTFL 420
Query: 421 GLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEI 480
GLLMACSHGGLVAEGKKYFF+MSDKYKLRPQ+EHYGCMIDLLGR GLVKEAEEI+HKMEI
Sbjct: 421 GLLMACSHGGLVAEGKKYFFEMSDKYKLRPQSEHYGCMIDLLGRVGLVKEAEEIVHKMEI 480
Query: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKI 540
RPDVFACGALLGACRIHGNVDIGESVMQKLTE+DPDE+GTYILMTNLYSSVHRWKDA K+
Sbjct: 481 RPDVFACGALLGACRIHGNVDIGESVMQKLTEIDPDEDGTYILMTNLYSSVHRWKDASKL 540
Query: 541 RKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHS 600
RKTMK KKMRKTPGCS IEVDGVVHEFRKGDKSHPRSKVIY VLEGIATHLKSYGI EHS
Sbjct: 541 RKTMKIKKMRKTPGCSSIEVDGVVHEFRKGDKSHPRSKVIYFVLEGIATHLKSYGIVEHS 545
Query: 601 TFCI 605
TFCI
Sbjct: 601 TFCI 545
BLAST of CsaV3_3G039550 vs. ExPASy TrEMBL
Match:
A0A6J1G7N7 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451544 PE=4 SV=1)
HSP 1 Score: 1001.1 bits (2587), Expect = 2.0e-288
Identity = 504/611 (82.49%), Postives = 534/611 (87.40%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPN--LIPKLIFLSSSSSSSSPDL 60
MNS +L L HSLNSC SI+HLKQ+H VAIKTPSLSL N L PKLI S SSSS SPDL
Sbjct: 1 MNSQELRLLPHSLNSCTSIAHLKQLHAVAIKTPSLSLHNQLLFPKLI--SLSSSSPSPDL 60
Query: 61 FYIRSILLTHSHDAQFCLSLCNAIIRSI-------SRNSINLSPMEFLNEMLVVGLEPDG 120
FYIRSILLT S DAQF L+LCNA I I S NS L MEFL EML++G++PDG
Sbjct: 61 FYIRSILLTSSADAQFRLNLCNAFIHRISANSNGESTNSTGLRAMEFLREMLLIGVQPDG 120
Query: 121 FTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFD 180
FT+P VLKALA IQ IREGQQIHA SIK G+V FNVYV NTLMRLYSVCGSI VQK+F
Sbjct: 121 FTLPHVLKALARIQRIREGQQIHAHSIKIGLVRFNVYVCNTLMRLYSVCGSIDAVQKLFG 180
Query: 181 ECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNL 240
ECPHRDLVSWTTLIQAFTKAGLY +AV AFMEMCDL+LRADGRTLVVVLSACSNLGDLNL
Sbjct: 181 ECPHRDLVSWTTLIQAFTKAGLYRKAVGAFMEMCDLKLRADGRTLVVVLSACSNLGDLNL 240
Query: 241 GQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLA 300
G+KVHSYI HYID+ ADVFVGNALLDMYLKCDD NSAYKVFDEMPV+NVVTWNAMI GLA
Sbjct: 241 GRKVHSYIHHYIDVNADVFVGNALLDMYLKCDDSNSAYKVFDEMPVRNVVTWNAMILGLA 300
Query: 301 YQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKF 360
YQGRY+EALD FR MQ G KPDEVTLVGVLNSCANLGVLE+GKWVHAYMRRNHILADKF
Sbjct: 301 YQGRYKEALDMFRRMQRTGPKPDEVTLVGVLNSCANLGVLELGKWVHAYMRRNHILADKF 360
Query: 361 VGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVG 420
VGNALLDMYAKCG IDEAFRVFE MKRRDVYSYTAMI GLALHGEANWAFQVFS M R G
Sbjct: 361 VGNALLDMYAKCGRIDEAFRVFEGMKRRDVYSYTAMIVGLALHGEANWAFQVFSRMLREG 420
Query: 421 IEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEA 480
+EPNEVTFLGLLMACSH GLV++GKK FF MS+ YKLRPQAEHYGCMIDLLGRAGLVKEA
Sbjct: 421 VEPNEVTFLGLLMACSHSGLVSDGKKCFFDMSNTYKLRPQAEHYGCMIDLLGRAGLVKEA 480
Query: 481 EEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSV 540
EEIIH MEIRPD FA GALLGACRIHGNV++GESVMQKL LDP E+G YILMTNLYSS
Sbjct: 481 EEIIHSMEIRPDAFAWGALLGACRIHGNVNLGESVMQKLMNLDPGEDGNYILMTNLYSSA 540
Query: 541 HRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHL 600
HRWKDALK+RK MK+KKMRKTPGCSLIEVDGVVHEFRKGDKSHP+++VIY VLEGIA HL
Sbjct: 541 HRWKDALKLRKKMKSKKMRKTPGCSLIEVDGVVHEFRKGDKSHPKNRVIYSVLEGIACHL 600
Query: 601 KSYGIEEHSTF 603
KSYG EHSTF
Sbjct: 601 KSYGTVEHSTF 609
BLAST of CsaV3_3G039550 vs. ExPASy TrEMBL
Match:
A0A6J1I3M1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470240 PE=4 SV=1)
HSP 1 Score: 978.8 bits (2529), Expect = 1.0e-281
Identity = 494/610 (80.98%), Postives = 528/610 (86.56%), Query Frame = 0
Query: 1 MNSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPN--LIPKLIFLSSSSSSSSPDL 60
MNS +L L HSLNSC SI+HLKQ+H VAIKTPSLSL N L KLI S SSSSSPDL
Sbjct: 1 MNSQELLLLPHSLNSCTSIAHLKQLHAVAIKTPSLSLHNQFLFRKLI---SLSSSSSPDL 60
Query: 61 FYIRSILLTHSHDAQFCLSLCNAIIRSI-------SRNSINLSPMEFLNEMLVVGLEPDG 120
FYIRSILLT DAQF L+LCNA I I S NS L MEFL EML++G++PDG
Sbjct: 61 FYIRSILLTSLADAQFRLNLCNAFIHRISANSNGESTNSTGLRAMEFLREMLLIGVQPDG 120
Query: 121 FTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFD 180
FT+P VLKALA +Q IREGQQIHA SIK G+V FNVYV NTLMRLYSVCGSI VQK+F
Sbjct: 121 FTLPHVLKALARVQRIREGQQIHAHSIKIGLVRFNVYVCNTLMRLYSVCGSIDAVQKLFG 180
Query: 181 ECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNL 240
E PH DLVSWTTLIQAFTKAGLY +AV AFMEMCDL+LRADGRTLVVVLSACSNLGDLNL
Sbjct: 181 EYPHPDLVSWTTLIQAFTKAGLYRKAVGAFMEMCDLKLRADGRTLVVVLSACSNLGDLNL 240
Query: 241 GQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLA 300
G+K+HSYI HYID+ DVFVGNALLDMYLKCDD NSAYKVFDEMPV+NVVTWNAMI GLA
Sbjct: 241 GRKMHSYIHHYIDVNVDVFVGNALLDMYLKCDDSNSAYKVFDEMPVRNVVTWNAMILGLA 300
Query: 301 YQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKF 360
YQGRY+EALD FR MQ G KPDEVTLVGVLNSCANLGVLE+G+WVHAYMRRN+ILADKF
Sbjct: 301 YQGRYKEALDMFRRMQRTGPKPDEVTLVGVLNSCANLGVLELGRWVHAYMRRNYILADKF 360
Query: 361 VGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVG 420
VGNALLDMYAKCG IDEAFRVFESMKRRDVYSYTAMI GLALHGEANWAFQVFS M R G
Sbjct: 361 VGNALLDMYAKCGGIDEAFRVFESMKRRDVYSYTAMIVGLALHGEANWAFQVFSRMLREG 420
Query: 421 IEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEA 480
+EPNEVTFLGLLMACSH GLV++GKKYFF MS+ YKLRPQAEHYGCMIDLLGRAGLVKEA
Sbjct: 421 VEPNEVTFLGLLMACSHSGLVSDGKKYFFDMSNTYKLRPQAEHYGCMIDLLGRAGLVKEA 480
Query: 481 EEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSV 540
EEIIH MEIRPD FA GALLGACRIHGNV++GESVMQKL LDP E+G YILMTNLYSS
Sbjct: 481 EEIIHSMEIRPDAFAWGALLGACRIHGNVNLGESVMQKLMNLDPVEDGNYILMTNLYSSA 540
Query: 541 HRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHL 600
HRWKD LK+RKTMK+KKMRKTPGCSLIEVDGVVHEFRKGD SHP+S+VIY VLEGIA HL
Sbjct: 541 HRWKDTLKLRKTMKSKKMRKTPGCSLIEVDGVVHEFRKGDMSHPKSRVIYSVLEGIACHL 600
Query: 601 KSYGIEEHST 602
KS+G EH T
Sbjct: 601 KSFGSVEHIT 607
BLAST of CsaV3_3G039550 vs. ExPASy TrEMBL
Match:
A0A0A0LFA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815410 PE=4 SV=1)
HSP 1 Score: 978.4 bits (2528), Expect = 1.4e-281
Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0
Query: 131 QQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTK 190
QQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTK
Sbjct: 217 QQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTK 276
Query: 191 AGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVF 250
AGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVF
Sbjct: 277 AGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVF 336
Query: 251 VGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKG 310
VGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKG
Sbjct: 337 VGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKG 396
Query: 311 VKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAF 370
VKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAF
Sbjct: 397 VKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAF 456
Query: 371 RVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGG 430
RVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGG
Sbjct: 457 RVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGG 516
Query: 431 LVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGAL 490
LVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGAL
Sbjct: 517 LVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGAL 576
Query: 491 LGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMR 550
LGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMR
Sbjct: 577 LGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMR 636
Query: 551 KTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHSTFCI 605
KTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHSTFCI
Sbjct: 637 KTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYLVLEGIATHLKSYGIEEHSTFCI 690
BLAST of CsaV3_3G039550 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 451.1 bits (1159), Expect = 1.5e-126
Identity = 236/627 (37.64%), Postives = 371/627 (59.17%), Query Frame = 0
Query: 2 NSLQLHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYI 61
+S++ H L++CK++ L+ IH IK + + KLI S L Y
Sbjct: 29 DSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE-GLPYA 88
Query: 62 RSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKAL 121
S+ T L + N + R + +S +S ++ M+ +GL P+ +T P VLK+
Sbjct: 89 ISVFKTIQEPN---LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSC 148
Query: 122 ALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHR----- 181
A + +EGQQIH +K G ++YV +L+ +Y G + D KVFD+ PHR
Sbjct: 149 AKSKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 208
Query: 182 --------------------------DLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLR 241
D+VSW +I + + G Y A+E F +M +R
Sbjct: 209 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 268
Query: 242 ADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYK 301
D T+V V+SAC+ G + LG++VH +I + +++ + NAL+D+Y KC +L +A
Sbjct: 269 PDESTMVTVVSACAQSGSIELGRQVHLWIDDH-GFGSNLKIVNALIDLYSKCGELETACG 328
Query: 302 VFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGV 361
+F+ +P K+V++WN +I G + Y+EAL F+ M G P++VT++ +L +CA+LG
Sbjct: 329 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 388
Query: 362 LEIGKWVHAYM--RRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMI 421
++IG+W+H Y+ R + + +L+DMYAKCG I+ A +VF S+ + + S+ AMI
Sbjct: 389 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 448
Query: 422 FGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKL 481
FG A+HG A+ +F +FS M ++GI+P+++TF+GLL ACSH G++ G+ F M+ YK+
Sbjct: 449 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKM 508
Query: 482 RPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQ 541
P+ EHYGCMIDLLG +GL KEAEE+I+ ME+ PD +LL AC++HGNV++GES +
Sbjct: 509 TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAE 568
Query: 542 KLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFR 596
L +++P+ G+Y+L++N+Y+S RW + K R + +K M+K PGCS IE+D VVHEF
Sbjct: 569 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 628
BLAST of CsaV3_3G039550 vs. TAIR 10
Match:
AT1G31430.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 419.9 bits (1078), Expect = 3.6e-117
Identity = 217/546 (39.74%), Postives = 326/546 (59.71%), Query Frame = 0
Query: 76 LSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHA 135
L + N +++S++ + E+ GL PD FT+P+VLK++ ++ + EG+++H
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 136 RSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYS 195
++K G+ F+ YVSN+LM +Y+ G I KVFDE P RD+VSW LI ++ G +
Sbjct: 71 YAVKAGL-EFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 130
Query: 196 RAVEAFMEMC-DLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNA 255
A+ F M + L+ D T+V LSACS L +L +G++++ ++ + + V +GNA
Sbjct: 131 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV--VTEFEMSVRIGNA 190
Query: 256 LLDMYLKCDDLNSAYKVFDEM-------------------------------PVKNVVTW 315
L+DM+ KC L+ A VFD M PVK+VV W
Sbjct: 191 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 250
Query: 316 NAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRR 375
AM++G R+ EAL+ FR MQ G++PD LV +L CA G LE GKW+H Y+
Sbjct: 251 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 310
Query: 376 NHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQV 435
N + DK VG AL+DMYAKCG I+ A VF +K RD S+T++I+GLA++G + A +
Sbjct: 311 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 370
Query: 436 FSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLG 495
+ EM VG+ + +TF+ +L AC+HGG VAEG+K F M++++ ++P++EH C+IDLL
Sbjct: 371 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 430
Query: 496 RAGLVKEAEEIIHKMEIRPD---VFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGT 555
RAGL+ EAEE+I KM D V +LL A R +GNV I E V +KL +++ +
Sbjct: 431 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 490
Query: 556 YILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDK--SHPRSK 585
+ L+ ++Y+S +RW+D +R+ MK+ +RK PGCS IE+DGV HEF GD SHP+
Sbjct: 491 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 550
BLAST of CsaV3_3G039550 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 416.4 bits (1069), Expect = 4.0e-116
Identity = 229/617 (37.12%), Postives = 342/617 (55.43%), Query Frame = 0
Query: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYIRSILLTHSHDA 72
L CK + HLKQI I + P +LI + S S D Y IL +
Sbjct: 60 LEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLD--YSVKILKGIENPN 119
Query: 73 QFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGL---EPDGFTIPLVLKALALIQGIRE 132
F N IR S + +ML G PD FT P++ K A ++
Sbjct: 120 IFS---WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 179
Query: 133 GQQI--HARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQA 192
G I H ++ +V +V N + +++ CG + + +KVFDE P RDLVSW LI
Sbjct: 180 GHMILGHVLKLRLELVS---HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLING 239
Query: 193 FTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKA 252
+ K G +A+ + M ++ D T++ ++S+CS LGDLN G++ + Y++ ++
Sbjct: 240 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRM 299
Query: 253 DVFVGNALLDMYLKCDDLNSA-------------------------------YKVFDEMP 312
+ + NAL+DM+ KC D++ A K+FD+M
Sbjct: 300 TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 359
Query: 313 VKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKW 372
K+VV WNAMI G R ++AL F+ MQ KPDE+T++ L++C+ LG L++G W
Sbjct: 360 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 419
Query: 373 VHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGE 432
+H Y+ + + + +G +L+DMYAKCG+I EA VF ++ R+ +YTA+I GLALHG+
Sbjct: 420 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 479
Query: 433 ANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYG 492
A+ A F+EM GI P+E+TF+GLL AC HGG++ G+ YF QM ++ L PQ +HY
Sbjct: 480 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 539
Query: 493 CMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPD 552
M+DLLGRAGL++EA+ ++ M + D GALL CR+HGNV++GE +KL ELDP
Sbjct: 540 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 599
Query: 553 EEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPR 594
+ G Y+L+ +Y + W+DA + R+ M + + K PGCS IEV+G+V EF DKS P
Sbjct: 600 DSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPE 659
BLAST of CsaV3_3G039550 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 412.9 bits (1060), Expect = 4.4e-115
Identity = 221/618 (35.76%), Postives = 355/618 (57.44%), Query Frame = 0
Query: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYIRSILLTHSHDA 72
+ C S+ LKQ HG I+T + S P KL +++ SS +S L Y R +
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFAS--LEYARKVFDEIPKPN 96
Query: 73 QFCLSLCNAIIRS-ISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQ 132
F N +IR+ S LS FL+ + P+ +T P ++KA A + + GQ
Sbjct: 97 SFA---WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 156
Query: 133 QIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKA 192
+H ++K+ VG +V+V+N+L+ Y CG + KVF +D+VSW ++I F +
Sbjct: 157 SLHGMAVKSA-VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 216
Query: 193 GLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFV 252
G +A+E F +M ++A T+V VLSAC+ + +L G++V SYI + ++ +
Sbjct: 217 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLTL 276
Query: 253 GNALLDMYLKCDDLNSAYKVFD-------------------------------EMPVKNV 312
NA+LDMY KC + A ++FD MP K++
Sbjct: 277 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 336
Query: 313 VTWNAMISGLAYQGRYREALDTFRMMQ-DKGVKPDEVTLVGVLNSCANLGVLEIGKWVHA 372
V WNA+IS G+ EAL F +Q K +K +++TLV L++CA +G LE+G+W+H+
Sbjct: 337 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 396
Query: 373 YMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANW 432
Y++++ I + V +AL+ MY+KCG ++++ VF S+++RDV+ ++AMI GLA+HG N
Sbjct: 397 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNE 456
Query: 433 AFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMI 492
A +F +M ++PN VTF + ACSH GLV E + F QM Y + P+ +HY C++
Sbjct: 457 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIV 516
Query: 493 DLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEG 552
D+LGR+G +++A + I M I P GALLGAC+IH N+++ E +L EL+P +G
Sbjct: 517 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDG 576
Query: 553 TYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKV 598
++L++N+Y+ + +W++ ++RK M+ ++K PGCS IE+DG++HEF GD +HP S+
Sbjct: 577 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 636
BLAST of CsaV3_3G039550 vs. TAIR 10
Match:
AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 411.8 bits (1057), Expect = 9.8e-115
Identity = 219/613 (35.73%), Postives = 352/613 (57.42%), Query Frame = 0
Query: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSSPDLFYIRSILLTHSHDA 72
L+ CKS++H+KQ+H ++T + + + +F + S SSSS +L Y ++ +
Sbjct: 19 LSFCKSLNHIKQLHAHILRT---VINHKLNSFLF-NLSVSSSSINLSYALNVFSSIPSPP 78
Query: 73 QFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQ 132
+ + N +R +SR+S + + F + VG D F+ +LKA++ + + EG +
Sbjct: 79 ESI--VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGME 138
Query: 133 IHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAG 192
+H + K + + +V M +Y+ CG I+ + VFDE HRD+V+W T+I+ + + G
Sbjct: 139 LHGVAFKIATL-CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 198
Query: 193 LYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYI--------RHYI- 252
L A + F EM D + D L ++SAC G++ + ++ ++ H +
Sbjct: 199 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 258
Query: 253 ------------DMKAD---------VFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVT 312
DM + +FV A++ Y KC L+ A +FD+ K++V
Sbjct: 259 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 318
Query: 313 WNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMR 372
W MIS +EAL F M G+KPD V++ V+++CANLG+L+ KWVH+ +
Sbjct: 319 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 378
Query: 373 RNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQ 432
N + ++ + NAL++MYAKCG +D VFE M RR+V S+++MI L++HGEA+ A
Sbjct: 379 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 438
Query: 433 VFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLL 492
+F+ M + +EPNEVTF+G+L CSH GLV EGKK F M+D+Y + P+ EHYGCM+DL
Sbjct: 439 LFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLF 498
Query: 493 GRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYI 552
GRA L++EA E+I M + +V G+L+ ACRIHG +++G+ +++ EL+PD +G +
Sbjct: 499 GRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALV 558
Query: 553 LMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIYL 596
LM+N+Y+ RW+D IR+ M+ K + K G S I+ +G HEF GDK H +S IY
Sbjct: 559 LMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYA 618
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_031737800.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ... | [more] |
KAA0053939.1 | 0.0e+00 | 93.21 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25465... | [more] |
XP_031737802.1 | 0.0e+00 | 94.54 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X2 ... | [more] |
XP_038902993.1 | 6.2e-305 | 87.25 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Benin... | [more] |
XP_016899770.1 | 1.3e-289 | 84.11 | PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic ... | [more] |
Match Name | E-value | Identity | Description | |
Q9LN01 | 2.0e-125 | 37.64 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9C866 | 5.0e-116 | 39.74 | Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 5.6e-115 | 37.12 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
O82380 | 6.2e-114 | 35.76 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
O23337 | 1.4e-113 | 35.73 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UKB6 | 0.0e+00 | 93.21 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S4DVM9 | 6.1e-290 | 84.11 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 ... | [more] |
A0A6J1G7N7 | 2.0e-288 | 82.49 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
A0A6J1I3M1 | 1.0e-281 | 80.98 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like isofor... | [more] |
A0A0A0LFA5 | 1.4e-281 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815410 PE=4 SV=1 | [more] |