CsaV3_3G039420 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G039420
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	VARLMGL domain-containing protein
Location	chr3: 32420326 .. 32423063 (-)
RNA-Seq Expression	CsaV3_3G039420
Synteny	CsaV3_3G039420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGTATCTATTTATATGATATGATGGCGCCATAGTTTTAAGTCCAAAATCAGGGTTTCTATTTGAGAGATCAATGAAGAGTAACAGCTTCTTGTCATCTTCTTCACAACTCGAAATTTCCTCCGATAATCTCCTCCGCCACAGACACCACCGCCGTTCCAGATCCTTCGGCTGTGTCTCCAGCCTCCTCCATTTCTTCTCTAACAACCACACCCGCCGCAACAAATCAATCACATTCGGTATTTATTCTTCTTCTTCACAATCTTCTTCATCAGTTCCATTCATTCAAATTTTAACCTAATTTCACCCTAAAATCTCTCTGTTTCTCAGTCCACAACAGCATTCACGAACTCCACGATACCATTTCCATATCCAAAATTTCTCAATCTCCAAAACATGATTCCGCCGCTAATCTCCTAGTTTTCTCATCCGATTCATCGCGGATCGCGGAAAGATCCGATTCCACCATGTCCACAACGACGGTGGAGAGATTTCGAGGAGCGAGAGGTCCGATCGTGCGTTTGATGGGACTAGAAAGCACCACGGCGGAGGAGGAGAAGCAGAGGCAGGTTCTGGAAGCTTTGGAGAAATGTGAACGGGATCTTAAGGCGCTGAAGGAGTTCATCGATGCGTTTGAGTCGACAGAGAGTTTCAGATCGTCGTCTCCGGCTGGTGAAGGGAAAAGGATTGAGTTGATGGTTTTGAAACAGAAGGAGGAGGGTACTCCGGTGGCGGAAGAGCTGAGTTTGCCATGGCATTTCTTTAACCGCCAAGGCTTCAACAACTCCATGATCTTCCACCGCCCGTCTACAAATCCCGGTACGTTCTTTGCACTAAGAAATTTTTATTCATATATTATAATTTCAATATCTCTTAATAATAATAATAATATCTTCACATATTTAATAAATTTGTTAAACTTTTAAAATAAATTAATAAAAAATCAAATAAATTTTTTTTTACACGACAAAACGATTAAAAATATTTATTAATATAGAAAATTTTATAAATGTTTATTTGTAATTAAACTACAAGAAAATAAAAAGTTACGAGAGTTTAAATACGAAAATAATAAATAATTTTCTACTACAAATAAAATTGAAATAGGGCAGAGAAAAATTGACAATAAAAAAGGGAGGGTAAATAAAAGAAGAGAAAGTAAGCTAGTGATGAATTTGATAATTAGAGGTAATTTGGTAAAAAGTGAAAAAAATTGATGAAATTAAAGTAGGGTGTAATGATAACACATCAATTATAATGTTGCGGTATGCAATGATAATAATTTTTGGGCCAAAAATAAAGTAATAATTGCCTTTATTATTCTTTTGCAATTATTCTCAATCCCATTAACACTTCCAAAATTATTGTTTTAGGTAAAATTAAATTTTAGATGAATTTTAAAATTTTACGTAAATATTTTCATTTATTTAAACCCTAATATCATATACATCATTGAGTACACCATCGTCACTTTTATTCATTTACAGTTAAATTATAAATTTAGTATCATTCCCTTCCTAAGTTCTCGACTTGATAGTAAAATAATTTTAAGCTTTTAAATCTTTTTATATAATAGAACATAGATAAATTATTTTTTAAAAGAATATTGACAGAATAAATATAAATATAAATCTTGACTCTGATTGAGCCTTAAACTTAAATTTTGTGTATGATATATTTGTGATTTTTTTAAAGAAAATTTAAAATCTTAGTAGTTATTATTATGTTGTAGTTATGCCCTTTTCAAGGTTCATAAAAATGGTGTTGGGGTTTCCACTTTCCATTTATGATAGAAAGAATTTAGATGGAAAACATCTCTACAGAAGAAACTTTTCAAAGATTCCTTTTTATTCTTGAAGTTGGATTTATTTATTTTTTTAAAAAAAACAACCGTTAGAGGCTTTTTGTCACTAAATTCATAAATGGAAAGGTTTTGAATTTTGTTGGGGAACAAATCTAAATGCATTATTTATTGATTGATTAATTAAAACCCAAAACATATAATAACTAATTTCCACACCATATACTAAAAACATTGATCATATATTCAAAATAAACCTCTCTTATAGTAATTTCGAGTCTAACTCAAATGCATAGCAGAGAGCTAATAATTATTTGCAATCATAAACTATTGTAGGAAAAACAATACAATCACAGCAAATTCAACAAATGCAAAGGAAGAAACAAGAAGATGATCAGAAGGATATGATGATATTGAATAATGTAAGCAAATTTGATGGAACAAAAAACAAAACCCATGAAATAGTAATTGGTAAGTGGAAATTAAGTGAAAAGGGAAACGATGAATTATGCCATTCACTATGCAGAAGTAGTAATAATAATAAGGTGGAAATGAGAGAGAGTGTAGAAGAAGTGTTCGAAGACATTTTTTGGGGTCAAAAGAAGGAATTGGGAAGAATAGGATTGACTTTACAAAATCAAATTTGTGGAGATTTGATTGAAGAGTTAGTTAAAGATTTGAATTTTAGTTATACTTTTACTTATTATAATACTTCACTACCCTTTCAAGCTTGCAAAAGAAGCCTTCGTTTCTAGTTTTCCTTTTCTTTCTTTTGTGTGTATGTGTGTGTGGATTGTTAATTAATATACATTATATAGTATAAGTCATATTTGATTCTATTGATCAACTATTTCAATATATAGACAATTTTGTTAACCATTTTTAGTATGTTATTATTATGCTTTTACCTTTAAATGATCTATTCTGCCTTCTTTTT

mRNA sequence

ATGAAGAGTAACAGCTTCTTGTCATCTTCTTCACAACTCGAAATTTCCTCCGATAATCTCCTCCGCCACAGACACCACCGCCGTTCCAGATCCTTCGGCTGTGTCTCCAGCCTCCTCCATTTCTTCTCTAACAACCACACCCGCCGCAACAAATCAATCACATTCGTCCACAACAGCATTCACGAACTCCACGATACCATTTCCATATCCAAAATTTCTCAATCTCCAAAACATGATTCCGCCGCTAATCTCCTAGTTTTCTCATCCGATTCATCGCGGATCGCGGAAAGATCCGATTCCACCATGTCCACAACGACGGTGGAGAGATTTCGAGGAGCGAGAGGTCCGATCGTGCGTTTGATGGGACTAGAAAGCACCACGGCGGAGGAGGAGAAGCAGAGGCAGGTTCTGGAAGCTTTGGAGAAATGTGAACGGGATCTTAAGGCGCTGAAGGAGTTCATCGATGCGTTTGAGTCGACAGAGAGTTTCAGATCGTCGTCTCCGGCTGGTGAAGGGAAAAGGATTGAGTTGATGGTTTTGAAACAGAAGGAGGAGGGTACTCCGGTGGCGGAAGAGCTGAGTTTGCCATGGCATTTCTTTAACCGCCAAGGCTTCAACAACTCCATGATCTTCCACCGCCCGTCTACAAATCCCGGAAAAACAATACAATCACAGCAAATTCAACAAATGCAAAGGAAGAAACAAGAAGATGATCAGAAGGATATGATGATATTGAATAATGTAAGCAAATTTGATGGAACAAAAAACAAAACCCATGAAATAGTAATTGGTAAGTGGAAATTAAGTGAAAAGGGAAACGATGAATTATGCCATTCACTATGCAGAAGTAGTAATAATAATAAGGTGGAAATGAGAGAGAGTGTAGAAGAAGTGTTCGAAGACATTTTTTGGGGTCAAAAGAAGGAATTGGGAAGAATAGGATTGACTTTACAAAATCAAATTTGTGGAGATTTGATTGAAGAGTTAGTTAAAGATTTGAATTTTAGTTATACTTTTACTTATTATAATACTTCACTACCCTTTCAAGCTTGCAAAAGAAGCCTTCGTTTCTAG

Coding sequence (CDS)

ATGAAGAGTAACAGCTTCTTGTCATCTTCTTCACAACTCGAAATTTCCTCCGATAATCTCCTCCGCCACAGACACCACCGCCGTTCCAGATCCTTCGGCTGTGTCTCCAGCCTCCTCCATTTCTTCTCTAACAACCACACCCGCCGCAACAAATCAATCACATTCGTCCACAACAGCATTCACGAACTCCACGATACCATTTCCATATCCAAAATTTCTCAATCTCCAAAACATGATTCCGCCGCTAATCTCCTAGTTTTCTCATCCGATTCATCGCGGATCGCGGAAAGATCCGATTCCACCATGTCCACAACGACGGTGGAGAGATTTCGAGGAGCGAGAGGTCCGATCGTGCGTTTGATGGGACTAGAAAGCACCACGGCGGAGGAGGAGAAGCAGAGGCAGGTTCTGGAAGCTTTGGAGAAATGTGAACGGGATCTTAAGGCGCTGAAGGAGTTCATCGATGCGTTTGAGTCGACAGAGAGTTTCAGATCGTCGTCTCCGGCTGGTGAAGGGAAAAGGATTGAGTTGATGGTTTTGAAACAGAAGGAGGAGGGTACTCCGGTGGCGGAAGAGCTGAGTTTGCCATGGCATTTCTTTAACCGCCAAGGCTTCAACAACTCCATGATCTTCCACCGCCCGTCTACAAATCCCGGAAAAACAATACAATCACAGCAAATTCAACAAATGCAAAGGAAGAAACAAGAAGATGATCAGAAGGATATGATGATATTGAATAATGTAAGCAAATTTGATGGAACAAAAAACAAAACCCATGAAATAGTAATTGGTAAGTGGAAATTAAGTGAAAAGGGAAACGATGAATTATGCCATTCACTATGCAGAAGTAGTAATAATAATAAGGTGGAAATGAGAGAGAGTGTAGAAGAAGTGTTCGAAGACATTTTTTGGGGTCAAAAGAAGGAATTGGGAAGAATAGGATTGACTTTACAAAATCAAATTTGTGGAGATTTGATTGAAGAGTTAGTTAAAGATTTGAATTTTAGTTATACTTTTACTTATTATAATACTTCACTACCCTTTCAAGCTTGCAAAAGAAGCCTTCGTTTCTAG

Protein sequence

MKSNSFLSSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNSIHELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVRLMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMVLKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQRKKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMRESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPFQACKRSLRF*

Homology

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BLAST of CsaV3_3G039420 vs. NCBI nr
Match: XP_031738680.1 (uncharacterized protein LOC105434989 [Cucumis sativus] >KAE8651156.1 hypothetical protein Csa_001876 [Cucumis sativus])

HSP 1 Score: 693.7 bits (1789), Expect = 8.2e-196
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MKSNSFLSSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNSI 60
           MKSNSFLSSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNSI
Sbjct: 1   MKSNSFLSSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNSI 60

Query: 61  HELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVRL 120
           HELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVRL
Sbjct: 61  HELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVRL 120

Query: 121 MGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMVL 180
           MGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMVL
Sbjct: 121 MGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMVL 180

Query: 181 KQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQRKKQEDDQK 240
           KQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQRKKQEDDQK
Sbjct: 181 KQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQRKKQEDDQK 240

Query: 241 DMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMRESVEEVFE 300
           DMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMRESVEEVFE
Sbjct: 241 DMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMRESVEEVFE 300

Query: 301 DIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPFQACKRSLRF 358
           DIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPFQACKRSLRF
Sbjct: 301 DIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPFQACKRSLRF 357

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BLAST of CsaV3_3G039420 vs. NCBI nr
Match: XP_008443137.1 (PREDICTED: uncharacterized protein LOC103486818 [Cucumis melo])

HSP 1 Score: 563.9 bits (1452), Expect = 9.8e-157
Identity = 307/358 (85.75%), Postives = 321/358 (89.66%), Query Frame = 0


Query: 2   KSNSFL--SSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNS 61
           + NSFL  SSSSQL+ISSDNLLRH H RRSRSFGCVSSLLHF SN+H RRNKSITFVHNS
Sbjct: 3   RQNSFLSSSSSSQLQISSDNLLRHSHSRRSRSFGCVSSLLHFLSNSHKRRNKSITFVHNS 62

Query: 62  IHELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 121
           IHEL DTIS+SK S SPKHDSAANLL FSSDSSRIAERSDSTMSTTTVERFRGARGPIVR
Sbjct: 63  IHELDDTISVSKTSPSPKHDSAANLLFFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 122

Query: 122 LMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMV 181
           LMGLES+TA EEKQRQV+EALEKCERDLKALKEFIDAFESTESFRS SPAGEGKRIELMV
Sbjct: 123 LMGLESSTAVEEKQRQVMEALEKCERDLKALKEFIDAFESTESFRSLSPAGEGKRIELMV 182

Query: 182 LKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQRKKQEDDQ 241
           LKQ+EEG+PVAEELS PWH  NR GFNNSMIFHRPS N G+ IQSQ+IQQMQRKKQED +
Sbjct: 183 LKQQEEGSPVAEELSWPWHLLNRHGFNNSMIFHRPSANSGR-IQSQKIQQMQRKKQEDQE 242

Query: 242 KDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMRESVEEVF 301
             MM+LN VSKFD TKNKTHEIVIG WKLSEK   EL  SLCRS   NKV MRESVEEVF
Sbjct: 243 DHMMMLNTVSKFDRTKNKTHEIVIGNWKLSEKAK-ELSPSLCRS---NKVAMRESVEEVF 302

Query: 302 EDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPFQACKRSLRF 358
           +DIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFS+TFTYY TSLPFQACKRSL F
Sbjct: 303 KDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSFTFTYY-TSLPFQACKRSLCF 354

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BLAST of CsaV3_3G039420 vs. NCBI nr
Match: XP_038905750.1 (uncharacterized protein LOC120091709 [Benincasa hispida])

HSP 1 Score: 456.1 bits (1172), Expect = 2.9e-124
Identity = 265/365 (72.60%), Postives = 298/365 (81.64%), Query Frame = 0


Query: 2   KSNSFLSSSSQLEISSDNLLR--HRHHRRSRSFGCVSSLLHFFS-NNHTRRNKSITFVHN 61
           + NSFLSSSSQ+EISSDN LR  HRHH  SRSFGCVSSLLHF S NNH+RRNKSITFVHN
Sbjct: 3   RQNSFLSSSSQVEISSDNFLRRSHRHH-GSRSFGCVSSLLHFLSNNNHSRRNKSITFVHN 62

Query: 62  SIHELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIV 121
           SIHEL + IS S ISQSPKH+SAANLL+ SSDS +IAERS+STMSTTTVERFRGARGPIV
Sbjct: 63  SIHELDNAISKSNISQSPKHESAANLLISSSDSPQIAERSESTMSTTTVERFRGARGPIV 122

Query: 122 RLMGLESTTAEE------EKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEG 181
           RLMGLES+TAEE      EKQRQ++EALEKCE+DLK LKEFI+AFESTESFRSSSPAGEG
Sbjct: 123 RLMGLESSTAEEGVPAAVEKQRQIMEALEKCEQDLKVLKEFIEAFESTESFRSSSPAGEG 182

Query: 182 KRIELMVLKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQR 241
           KRIELMVLKQKEE +PVA  LS+      R+ F N+M FHRPS N G+ ++ QQIQQMQR
Sbjct: 183 KRIELMVLKQKEEASPVA--LSVVEELSRRRHFVNTMFFHRPSANSGR-MELQQIQQMQR 242

Query: 242 KKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMR 301
           KK E    DMM+ NN+SKFD TK K HEIVIG WK SEK  ++    LCRS    KV MR
Sbjct: 243 KKPEG---DMMMFNNLSKFDSTKTKIHEIVIGNWK-SEKAAEQ--SPLCRS----KVAMR 302

Query: 302 ESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPFQACK 358
           +SVE+VF++I WGQ KE+GRIGL LQNQICGDLIEELVKDLN++YT  YY +SLPF+ACK
Sbjct: 303 DSVEQVFKEISWGQNKEMGRIGLALQNQICGDLIEELVKDLNYNYTCGYY-SSLPFEACK 352

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BLAST of CsaV3_3G039420 vs. NCBI nr
Match: KAA0043677.1 (uncharacterized protein E6C27_scaffold236G00020 [Cucumis melo var. makuwa] >TYK25454.1 uncharacterized protein E5676_scaffold352G006000 [Cucumis melo var. makuwa])

HSP 1 Score: 361.3 bits (926), Expect = 9.6e-96
Identity = 193/220 (87.73%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 2   KSNSFL--SSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNS 61
           + NSFL  SSSSQL+ISSDNLLRH H RRSRSFGCVSSLLHF SN+H RRNKSITFVHNS
Sbjct: 3   RQNSFLSSSSSSQLQISSDNLLRHSHSRRSRSFGCVSSLLHFLSNSHKRRNKSITFVHNS 62

Query: 62  IHELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 121
           IHEL DTIS+SK S SPKHDSAANLL FSSDSSRIAERSDSTMSTTTVERFRGARGPIVR
Sbjct: 63  IHELDDTISVSKTSPSPKHDSAANLLFFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 122

Query: 122 LMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMV 181
           LMGLES+TA EEKQRQV+EALEKCERDLKALKEFIDAFESTESFRS SPAGEGKRIELMV
Sbjct: 123 LMGLESSTAVEEKQRQVMEALEKCERDLKALKEFIDAFESTESFRSLSPAGEGKRIELMV 182

Query: 182 LKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPG 220
           LKQ+EEG+PVAEELS PWH  NR GFNNSMIFHRPS N G
Sbjct: 183 LKQQEEGSPVAEELSWPWHLLNRHGFNNSMIFHRPSANSG 222

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BLAST of CsaV3_3G039420 vs. NCBI nr
Match: XP_022935193.1 (uncharacterized protein LOC111442147 [Cucurbita moschata])

HSP 1 Score: 355.9 bits (912), Expect = 4.0e-94
Identity = 223/369 (60.43%), Postives = 266/369 (72.09%), Query Frame = 0


Query: 2   KSNSFLSSSSQLEISSDNLLRHR-HHRRSRSFGCVSSLLHFFS-NNHTRRNKSITFVHNS 61
           + NSFLSSSSQ+EISSD+LLR     RRS+SFGCVS+LLHF S NNH+RRNKSITFVHNS
Sbjct: 3   RQNSFLSSSSQVEISSDDLLRRSLSRRRSKSFGCVSNLLHFLSNNNHSRRNKSITFVHNS 62

Query: 62  IHELHDTISI-SKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIV 121
             E  D  S  SKIS+SPK +SAANLL+ SS S  IAERS+S +STTTVERF GARGPIV
Sbjct: 63  NQEFLDNASSESKISRSPKPESAANLLISSSVSPPIAERSESAISTTTVERFLGARGPIV 122

Query: 122 RLMGLESTTAEE------EKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEG 181
           RLMGLES+  EE      EKQR+V+EALEKCE+DLKALKEFIDA +STESFR SSP  EG
Sbjct: 123 RLMGLESSKVEESVPEAAEKQRKVMEALEKCEQDLKALKEFIDALDSTESFRMSSPVSEG 182

Query: 182 KRIELMVLKQKEEGTPVA--EELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQM 241
           KRIE M  +Q+++ +PV+  EELS P HF NR   NNS IFH+PS NPG+ +QSQQ QQM
Sbjct: 183 KRIEFMAWEQQQDPSPVSVLEELSRPRHFVNRHACNNSRIFHQPSANPGR-VQSQQRQQM 242

Query: 242 --QRKKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNK 301
             ++KKQE D      + N+SKF+ T  K  E V+G WK  +      C          +
Sbjct: 243 MQRKKKQEGDH-----IFNISKFERT--KIPEEVVGNWKNEKAAESPPC---------GR 302

Query: 302 VEMRESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPF 358
             M++S+E V +DI WG K E+GRIGL LQ+QI GDL+EELVKD    +TFTY  TSLPF
Sbjct: 303 EAMKDSLEGVCKDISWGLKMEVGRIGLALQHQIFGDLLEELVKD----HTFTY--TSLPF 348

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BLAST of CsaV3_3G039420 vs. ExPASy TrEMBL
Match: A0A1S3B6W0 (uncharacterized protein LOC103486818 OS=Cucumis melo OX=3656 GN=LOC103486818 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 4.7e-157
Identity = 307/358 (85.75%), Postives = 321/358 (89.66%), Query Frame = 0


Query: 2   KSNSFL--SSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNS 61
           + NSFL  SSSSQL+ISSDNLLRH H RRSRSFGCVSSLLHF SN+H RRNKSITFVHNS
Sbjct: 3   RQNSFLSSSSSSQLQISSDNLLRHSHSRRSRSFGCVSSLLHFLSNSHKRRNKSITFVHNS 62

Query: 62  IHELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 121
           IHEL DTIS+SK S SPKHDSAANLL FSSDSSRIAERSDSTMSTTTVERFRGARGPIVR
Sbjct: 63  IHELDDTISVSKTSPSPKHDSAANLLFFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 122

Query: 122 LMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMV 181
           LMGLES+TA EEKQRQV+EALEKCERDLKALKEFIDAFESTESFRS SPAGEGKRIELMV
Sbjct: 123 LMGLESSTAVEEKQRQVMEALEKCERDLKALKEFIDAFESTESFRSLSPAGEGKRIELMV 182

Query: 182 LKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQRKKQEDDQ 241
           LKQ+EEG+PVAEELS PWH  NR GFNNSMIFHRPS N G+ IQSQ+IQQMQRKKQED +
Sbjct: 183 LKQQEEGSPVAEELSWPWHLLNRHGFNNSMIFHRPSANSGR-IQSQKIQQMQRKKQEDQE 242

Query: 242 KDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMRESVEEVF 301
             MM+LN VSKFD TKNKTHEIVIG WKLSEK   EL  SLCRS   NKV MRESVEEVF
Sbjct: 243 DHMMMLNTVSKFDRTKNKTHEIVIGNWKLSEKAK-ELSPSLCRS---NKVAMRESVEEVF 302

Query: 302 EDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPFQACKRSLRF 358
           +DIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFS+TFTYY TSLPFQACKRSL F
Sbjct: 303 KDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSFTFTYY-TSLPFQACKRSLCF 354

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BLAST of CsaV3_3G039420 vs. ExPASy TrEMBL
Match: A0A0A0LF86 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813800 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 3.1e-140
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 102 MSTTTVERFRGARGPIVRLMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTE 161
           MSTTTVERFRGARGPIVRLMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTE
Sbjct: 1   MSTTTVERFRGARGPIVRLMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTE 60

Query: 162 SFRSSSPAGEGKRIELMVLKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKT 221
           SFRSSSPAGEGKRIELMVLKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKT
Sbjct: 61  SFRSSSPAGEGKRIELMVLKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPGKT 120

Query: 222 IQSQQIQQMQRKKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLC 281
           IQSQQIQQMQRKKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLC
Sbjct: 121 IQSQQIQQMQRKKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLC 180

Query: 282 RSSNNNKVEMRESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTY 341
           RSSNNNKVEMRESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTY
Sbjct: 181 RSSNNNKVEMRESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTY 240

Query: 342 YNTSLPFQACKRSLRF 358
           YNTSLPFQACKRSLRF
Sbjct: 241 YNTSLPFQACKRSLRF 256

[Close]

BLAST of CsaV3_3G039420 vs. ExPASy TrEMBL
Match: A0A5A7TPF4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006000 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 4.7e-96
Identity = 193/220 (87.73%), Postives = 201/220 (91.36%), Query Frame = 0


Query: 2   KSNSFL--SSSSQLEISSDNLLRHRHHRRSRSFGCVSSLLHFFSNNHTRRNKSITFVHNS 61
           + NSFL  SSSSQL+ISSDNLLRH H RRSRSFGCVSSLLHF SN+H RRNKSITFVHNS
Sbjct: 3   RQNSFLSSSSSSQLQISSDNLLRHSHSRRSRSFGCVSSLLHFLSNSHKRRNKSITFVHNS 62

Query: 62  IHELHDTISISKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 121
           IHEL DTIS+SK S SPKHDSAANLL FSSDSSRIAERSDSTMSTTTVERFRGARGPIVR
Sbjct: 63  IHELDDTISVSKTSPSPKHDSAANLLFFSSDSSRIAERSDSTMSTTTVERFRGARGPIVR 122

Query: 122 LMGLESTTAEEEKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMV 181
           LMGLES+TA EEKQRQV+EALEKCERDLKALKEFIDAFESTESFRS SPAGEGKRIELMV
Sbjct: 123 LMGLESSTAVEEKQRQVMEALEKCERDLKALKEFIDAFESTESFRSLSPAGEGKRIELMV 182

Query: 182 LKQKEEGTPVAEELSLPWHFFNRQGFNNSMIFHRPSTNPG 220
           LKQ+EEG+PVAEELS PWH  NR GFNNSMIFHRPS N G
Sbjct: 183 LKQQEEGSPVAEELSWPWHLLNRHGFNNSMIFHRPSANSG 222

[Close]

BLAST of CsaV3_3G039420 vs. ExPASy TrEMBL
Match: A0A6J1F9V5 (uncharacterized protein LOC111442147 OS=Cucurbita moschata OX=3662 GN=LOC111442147 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 223/369 (60.43%), Postives = 266/369 (72.09%), Query Frame = 0


Query: 2   KSNSFLSSSSQLEISSDNLLRHR-HHRRSRSFGCVSSLLHFFS-NNHTRRNKSITFVHNS 61
           + NSFLSSSSQ+EISSD+LLR     RRS+SFGCVS+LLHF S NNH+RRNKSITFVHNS
Sbjct: 3   RQNSFLSSSSQVEISSDDLLRRSLSRRRSKSFGCVSNLLHFLSNNNHSRRNKSITFVHNS 62

Query: 62  IHELHDTISI-SKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIV 121
             E  D  S  SKIS+SPK +SAANLL+ SS S  IAERS+S +STTTVERF GARGPIV
Sbjct: 63  NQEFLDNASSESKISRSPKPESAANLLISSSVSPPIAERSESAISTTTVERFLGARGPIV 122

Query: 122 RLMGLESTTAEE------EKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEG 181
           RLMGLES+  EE      EKQR+V+EALEKCE+DLKALKEFIDA +STESFR SSP  EG
Sbjct: 123 RLMGLESSKVEESVPEAAEKQRKVMEALEKCEQDLKALKEFIDALDSTESFRMSSPVSEG 182

Query: 182 KRIELMVLKQKEEGTPVA--EELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQM 241
           KRIE M  +Q+++ +PV+  EELS P HF NR   NNS IFH+PS NPG+ +QSQQ QQM
Sbjct: 183 KRIEFMAWEQQQDPSPVSVLEELSRPRHFVNRHACNNSRIFHQPSANPGR-VQSQQRQQM 242

Query: 242 --QRKKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNK 301
             ++KKQE D      + N+SKF+ T  K  E V+G WK  +      C          +
Sbjct: 243 MQRKKKQEGDH-----IFNISKFERT--KIPEEVVGNWKNEKAAESPPC---------GR 302

Query: 302 VEMRESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPF 358
             M++S+E V +DI WG K E+GRIGL LQ+QI GDL+EELVKD    +TFTY  TSLPF
Sbjct: 303 EAMKDSLEGVCKDISWGLKMEVGRIGLALQHQIFGDLLEELVKD----HTFTY--TSLPF 348

[Close]

BLAST of CsaV3_3G039420 vs. ExPASy TrEMBL
Match: A0A6J1J6K2 (uncharacterized protein LOC111481687 OS=Cucurbita maxima OX=3661 GN=LOC111481687 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 6.3e-93
Identity = 224/369 (60.70%), Postives = 264/369 (71.54%), Query Frame = 0


Query: 2   KSNSFLSSSSQLEISSDNLLRHR-HHRRSRSFGCVSSLLHFFS-NNHTRRNKSITFVHNS 61
           + NSFLSSSSQ+EISSD+LLR     RRS+SFGCVS+LLHF S NNH+RRNKSITFVHNS
Sbjct: 3   RQNSFLSSSSQVEISSDDLLRRSLSRRRSKSFGCVSNLLHFLSNNNHSRRNKSITFVHNS 62

Query: 62  IHELHDTISI-SKISQSPKHDSAANLLVFSSDSSRIAERSDSTMSTTTVERFRGARGPIV 121
             E  D  S  SKIS+SPK +SAANLL+ SS S +IAERS+S +STT VERF GARGPIV
Sbjct: 63  NQEFLDNASSESKISRSPKPESAANLLISSSVSPQIAERSESEISTTKVERFLGARGPIV 122

Query: 122 RLMGLESTTAEE------EKQRQVLEALEKCERDLKALKEFIDAFESTESFRSSSPAGEG 181
           RLMGLES+  EE      EKQR+V+EALEKCE+DLKALKEFIDA ESTESFR SSP  EG
Sbjct: 123 RLMGLESSKVEESVPEAAEKQRKVMEALEKCEQDLKALKEFIDALESTESFRMSSPVSEG 182

Query: 182 KRIELMVLKQKEEGTPVA--EELSLPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQM 241
           KRIE M  +Q ++ +PV+  EELS P HF NR   NNS IFH+PS NPG+ +QSQQ QQM
Sbjct: 183 KRIEFMAWEQLQDPSPVSVLEELSRPRHFVNRHACNNSRIFHQPSANPGR-VQSQQRQQM 242

Query: 242 --QRKKQEDDQKDMMILNNVSKFDGTKNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNK 301
             ++KKQE D      + N+SKF+ T  K  E V+G  K  +      C          +
Sbjct: 243 MQRKKKQEGDH-----IFNISKFERT--KIPEEVVGNLKNEKAAESPGC---------GR 302

Query: 302 VEMRESVEEVFEDIFWGQKKELGRIGLTLQNQICGDLIEELVKDLNFSYTFTYYNTSLPF 358
             M++SVE V +DI WG K E+GRIGL LQ+QI GDLIEELVKD    +TFTY  TSLPF
Sbjct: 303 EAMKDSVEGVCKDISWGLKMEVGRIGLALQHQIFGDLIEELVKD----HTFTY--TSLPF 348

[Close]

BLAST of CsaV3_3G039420 vs. TAIR 10
Match: AT3G56810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-09
Identity = 67/248 (27.02%), Postives = 105/248 (42.34%), Query Frame = 0


Query: 139 ALEKCERDLKALKEFIDAFESTESFRSSSPAGEGKRIELMVLKQKE----EGTPVAEELS 198
           ALEKC+RDL+ L+  ID  ++T            KR+E+     +E     GT +A ++ 
Sbjct: 105 ALEKCDRDLEELRRTIDVIKTTYILH--------KRLEVSPPTTRENFKFSGTVLAGDVV 164

Query: 199 LPWHFFNRQGFNNSMIFHRPSTNPGKTIQSQQIQQMQRKKQEDDQKDMMILNNVSKFDGT 258
           +  H       N     H P T+   T+ S         K     K    +NN++     
Sbjct: 165 VGTHTQK----NTKTTQHEPDTD---TMLSMMNHHEYCCKDNKPYK----VNNINLITRP 224

Query: 259 KNKTHEIVIGKWKLSEKGNDELCHSLCRSSNNNKVEMRESVEEVFEDIFWGQKKELGRIG 318
            + +   VI K + +     E C +L       +  + ESV +V +D+  GQ++E+ +IG
Sbjct: 225 DHYSIHDVISK-RSTSTTTTESCGTLPLVVRRVRRSLMESVNQVCDDVASGQRREVAKIG 284

Query: 319 LTLQNQICGDLIEELVKDLNFS-------------------------YTFTYYNTSLPFQ 358
           L L + IC DLI E V++L+FS                         +     + SLPF 
Sbjct: 285 LALHDHICRDLIAETVRELSFSDYDDDEFYQSPVDSSVCYGGGGKGQHIRRGSSNSLPFD 332

The following BLAST results are available for this feature:

BLAST of CsaV3_3G039420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738680.1	8.2e-196	100.00	uncharacterized protein LOC105434989 [Cucumis sativus] >KAE8651156.1 hypothetica...	[more]
XP_008443137.1	9.8e-157	85.75	PREDICTED: uncharacterized protein LOC103486818 [Cucumis melo]	[more]
XP_038905750.1	2.9e-124	72.60	uncharacterized protein LOC120091709 [Benincasa hispida]	[more]
KAA0043677.1	9.6e-96	87.73	uncharacterized protein E6C27_scaffold236G00020 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_022935193.1	4.0e-94	60.43	uncharacterized protein LOC111442147 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G039420 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G039420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6W0	4.7e-157	85.75	uncharacterized protein LOC103486818 OS=Cucumis melo OX=3656 GN=LOC103486818 PE=...	[more]
A0A0A0LF86	3.1e-140	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G813800 PE=4 SV=1	[more]
A0A5A7TPF4	4.7e-96	87.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1F9V5	2.0e-94	60.43	uncharacterized protein LOC111442147 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A6J1J6K2	6.3e-93	60.70	uncharacterized protein LOC111481687 OS=Cucurbita maxima OX=3661 GN=LOC111481687...	[more]

BLAST of CsaV3_3G039420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56810.1	1.5e-09	27.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 140..160
None	No IPR available	PANTHER	PTHR37234:SF1	OS03G0319200 PROTEIN	coord: 4..357
None	No IPR available	PANTHER	PTHR37234	OS03G0319200 PROTEIN	coord: 4..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G039420.1	CsaV3_3G039420.1	mRNA