
CsaV3_3G039400 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAGTTGGGGGGAAAAGAAAGGGTTGTGGTGTATGTGGAAGTGAAATGAAATGGAGATGAGTAGCAAAAGAGATGATAAAAAAAGATTGAAGATATTGTGCCTTCATGGATTTAGAACAAATGGAAGTTTTCTTAGAAAGCAAATTAGCAAATGGGATCCTTCCATTTTTGCTCATTTTGATATGGTATGTTATGTTATATGTATGTATACATCTTCCAACGCAGTTTTTTTGTTTTAAATTTTGATAAACTGTTGTACGTAATTAATATCACTATCTCAATACGATAGGGGTGTTATTGGATTAATTTACGGGTCAAGTAATTTCTTTGTAGAGAAGGCTTTCATATTTCTCCATATTAACAACTTACATTGTGGGTTAAATTCCATTGTAACGGTTTGAAAGAAAGGAAAAAAAAAAAAACTTTTGAAAAGCTTTTTTTTGTGATGAAAACGTTTCAAAACTTTAAAGATTTAGGGTTTAGTAGGAAACCTTTTTTTTTTTTTTGAGACGTAGTATCGTTCTAATTATGTTTGAGACTTTTTTTTATTCTTTATATCAAACTATGATAATACGAACTTATGAGCATTTGAGTTTAGTGTTCATTTTAATTATTTATTTATTTATTTATATGTTCTTTATATATTTAATTTTTGTAGTTATGTCAATTTCTTAAAATCGTACACTTGCACTGAATTCACACTTTTTTTAGTTAATTCGAGAAACAGTCAATTTTATATTCATTCAATTTCAACCTTACGATGAAAATGAAAATTTTGACCAAAACACCCTTTACTTGACCTAATTTATAACATATGTTAGTGACTAAATAATTTGTAGTTCAATTCTTCGACGAGTAAATTTTACGATAAAATATAAATTCAAATGCATGATATATATAATAAGAGTAATAGTAATAATTTGTACATTTAAACAGGAATTTCCAGATGGTATATTTCCAGCAGGAGGAAAATCAGAGATAGAAGGATATTTTCCACCTCCTTATTTTGAATGGTTTCAATTTAATGAGGTACAATTTAAAATCAAATATTTTTTTCTAATATCTCAATATATGTATGCATGTGTGTGTATATATATATCAAAGAAAGTGATATATATATCTTGTTTTAATTTGAACATGGCAGGATTTCACAGAATACAAGAACTTGGAAGAATGCATAGATTATGTATGCAACTACATCACTACAAATGGCCCTTTTCATGGCTTATTGGGTTTTTCTCAAGTATGTTTCTTTTATTTTCTCTTTTAGATCTTGTTTTAAAAAGCATACATTATTGTATTTTCAAATTCACAAAATTTAAATTTTAAATTGAAACAAAATGTATTTTCAAATATAATGAAAAAAAATAATTTATTTTTAAAAATTGCTTTATTGTTGATAAAATAGATAACTATGTTTAAATAACCTTCTAAATAATTTCAAAGGTATATTTTTAAGGGTTTATTATGACATTGTTATATGGTAGAGTAATTAAAATGAAAATTATTTTAAATACCTTGATTTTACTGTATTTAAAAATAAGCCTAATTAAAATTTTACTCATTATTCAGGGAGCAGTATTGTCAGCACTCTTATTGGGTTACCAAGCACAGGTATACATTAATTAATCGAAAATATATCTAAAATAAGTGAAATAACCATTTTGATTTCAAATGAGTGAAATAAAAACATTGCAAAAAGTATAGTTATATTGATTAAGTTAGTGAATGATTGCAATAAATTATATCTAAGTCAAAGAGGATTAGTCATGACATCCATTTACATTTGATTTGAACAAAAAAACAATCTGGAAGAGTATGATTTTGAAGCAAATGTTAATATTGAAACTTCTGAATGTTTGTATGAGTATTGATTTTGTTGAAGTATAAAATAAACTGAGAAAAGAAATTGGAAATGGAAAACAGGGAAAGGTGTTGAAAGAGCATCCACCAATGAAAATGTTTGTGTCAATATCAGGAACAAAATTCAAAGATGAAAGCATATGTGAAGTTGCCTACAAACACAAGATAAAGGTTAAATCTGTTCACTTCATAGGTGAAAAGGATTGGTTGAAACTTCCTTCTCAACAACTTGCTTCGGTCTTCCATGAGCCTCTCATCATAAGGCATCCTCAAGGACATACAGTTCCTAGACTAGGTCATTTCTAGTCTACACACTATTCAACATATAAACATCTGTTCAACATGACGAGAGACTAATGTTTTTTTTTTTTTATAGATGAATCAGCTACTAAAGAGCTCAAATGTTGGGTTGATGCAATACTTTCTAGTCGTGATCATGATGGAGATGGAGAAGTGAAGGAGAATGTCATTGACAAAGTAGATGAGAGAATTGAAAATCAGATCCTGAAAGGGGAGAATAAATGTATCGATGTTGTTTAATTTTATAACATAAGTTGATAGGGAGAATGGATGAGTAAGCTTACAATCAATTGTGAGCTTTATCAAGGGGAGAAACAATATGTGGTGTCCATGCTTATTATGCTTCAAGCATACACATTTCAATTATGTCAAGTCTTGAATTTATGAATTGTGAAGTAATTTGATTGAACACCATAAACAGGGGCTTATATATATATATTAATTTCACCTAATCTATAGGGTTTGCAAATCCTATTTCAAAATAACTGTACAGGCAACGTAATGCTCAATCAATGAAGATCATATTAGATTTTTTTTCCCCCTCAAAAGTGATTCACAGCATCACTTTTCTTAGAACAAAATCTGTATAGAACTTACAGTTGTTGAAAGGCAATCAAGCACCACGGTTAGGGCAAACATTTGCGAAGTGTGACGGATCACCACAAACAAAACATCTTCTATCAGATATTGGCTCACCAGTTGCTGACACAAATGTTGCTGCAATCTGACCTTGACCCCGA ATGGAGATGAGTAGCAAAAGAGATGATAAAAAAAGATTGAAGATATTGTGCCTTCATGGATTTAGAACAAATGGAAGTTTTCTTAGAAAGCAAATTAGCAAATGGGATCCTTCCATTTTTGCTCATTTTGATATGGAATTTCCAGATGGTATATTTCCAGCAGGAGGAAAATCAGAGATAGAAGGATATTTTCCACCTCCTTATTTTGAATGGTTTCAATTTAATGAGGATTTCACAGAATACAAGAACTTGGAAGAATGCATAGATTATGTATGCAACTACATCACTACAAATGGCCCTTTTCATGGCTTATTGGGTTTTTCTCAAGGAGCAGTATTGTCAGCACTCTTATTGGGTTACCAAGCACAGGGAAAGGTGTTGAAAGAGCATCCACCAATGAAAATGTTTGTGTCAATATCAGGAACAAAATTCAAAGATGAAAGCATATGTGAAGTTGCCTACAAACACAAGATAAAGGTTAAATCTGTTCACTTCATAGGTGAAAAGGATTGGTTGAAACTTCCTTCTCAACAACTTGCTTCGGTCTTCCATGAGCCTCTCATCATAAGGCATCCTCAAGGACATACAGTTCCTAGACTAGATGAATCAGCTACTAAAGAGCTCAAATGTTGGGTTGATGCAATACTTTCTAGTCGTGATCATGATGGAGATGGAGAAGTGAAGGAGAATGTCATTGACAAAGTAGATGAGAGAATTGAAAATCAGATCCTGAAAGGGGAGAATAAATGTATCGATGTTGTTTAA ATGGAGATGAGTAGCAAAAGAGATGATAAAAAAAGATTGAAGATATTGTGCCTTCATGGATTTAGAACAAATGGAAGTTTTCTTAGAAAGCAAATTAGCAAATGGGATCCTTCCATTTTTGCTCATTTTGATATGGAATTTCCAGATGGTATATTTCCAGCAGGAGGAAAATCAGAGATAGAAGGATATTTTCCACCTCCTTATTTTGAATGGTTTCAATTTAATGAGGATTTCACAGAATACAAGAACTTGGAAGAATGCATAGATTATGTATGCAACTACATCACTACAAATGGCCCTTTTCATGGCTTATTGGGTTTTTCTCAAGGAGCAGTATTGTCAGCACTCTTATTGGGTTACCAAGCACAGGGAAAGGTGTTGAAAGAGCATCCACCAATGAAAATGTTTGTGTCAATATCAGGAACAAAATTCAAAGATGAAAGCATATGTGAAGTTGCCTACAAACACAAGATAAAGGTTAAATCTGTTCACTTCATAGGTGAAAAGGATTGGTTGAAACTTCCTTCTCAACAACTTGCTTCGGTCTTCCATGAGCCTCTCATCATAAGGCATCCTCAAGGACATACAGTTCCTAGACTAGATGAATCAGCTACTAAAGAGCTCAAATGTTGGGTTGATGCAATACTTTCTAGTCGTGATCATGATGGAGATGGAGAAGTGAAGGAGAATGTCATTGACAAAGTAGATGAGAGAATTGAAAATCAGATCCTGAAAGGGGAGAATAAATGTATCGATGTTGTTTAA MEMSSKRDDKKRLKILCLHGFRTNGSFLRKQISKWDPSIFAHFDMEFPDGIFPAGGKSEIEGYFPPPYFEWFQFNEDFTEYKNLEECIDYVCNYITTNGPFHGLLGFSQGAVLSALLLGYQAQGKVLKEHPPMKMFVSISGTKFKDESICEVAYKHKIKVKSVHFIGEKDWLKLPSQQLASVFHEPLIIRHPQGHTVPRLDESATKELKCWVDAILSSRDHDGDGEVKENVIDKVDERIENQILKGENKCIDVV* Homology
BLAST of CsaV3_3G039400 vs. NCBI nr
Match: XP_004136600.1 (esterase OVCA2 [Cucumis sativus] >KGN59361.1 hypothetical protein Csa_001052 [Cucumis sativus]) HSP 1 Score: 533.9 bits (1374), Expect = 7.7e-148 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. NCBI nr
Match: XP_008443142.1 (PREDICTED: esterase C25G4.2-like [Cucumis melo]) HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135 Identity = 233/252 (92.46%), Postives = 243/252 (96.43%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. NCBI nr
Match: KAG6596208.1 (Esterase-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 439.1 bits (1128), Expect = 2.6e-119 Identity = 206/243 (84.77%), Postives = 223/243 (91.77%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. NCBI nr
Match: XP_023539260.1 (family of serine hydrolases 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.7 bits (1127), Expect = 3.4e-119 Identity = 208/243 (85.60%), Postives = 222/243 (91.36%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. NCBI nr
Match: XP_022154224.1 (dihydrofolate reductase-like [Momordica charantia]) HSP 1 Score: 417.5 bits (1072), Expect = 8.0e-113 Identity = 196/244 (80.33%), Postives = 222/244 (90.98%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy Swiss-Prot
Match: P36591 (Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dfr1 PE=2 SV=2) HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15 Identity = 56/206 (27.18%), Postives = 92/206 (44.66%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy Swiss-Prot
Match: Q99369 (Family of serine hydrolases 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FSH3 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.4e-14 Identity = 73/268 (27.24%), Postives = 120/268 (44.78%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy Swiss-Prot
Match: Q7QBJ0 (Esterase AGAP003155 OS=Anopheles gambiae OX=7165 GN=AGAP003155 PE=3 SV=3) HSP 1 Score: 80.1 bits (196), Expect = 4.0e-14 Identity = 64/245 (26.12%), Postives = 110/245 (44.90%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy Swiss-Prot
Match: Q18169 (Esterase C25G4.2 OS=Caenorhabditis elegans OX=6239 GN=C25G4.2 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13 Identity = 61/209 (29.19%), Postives = 99/209 (47.37%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy Swiss-Prot
Match: A4II73 (Esterase OVCA2 OS=Xenopus tropicalis OX=8364 GN=ovca2 PE=2 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.6e-13 Identity = 65/206 (31.55%), Postives = 91/206 (44.17%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy TrEMBL
Match: A0A0A0LH35 (FSH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G813300 PE=4 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 3.7e-148 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy TrEMBL
Match: A0A1S3B6W5 (esterase C25G4.2-like OS=Cucumis melo OX=3656 GN=LOC103486820 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 7.3e-136 Identity = 233/252 (92.46%), Postives = 243/252 (96.43%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy TrEMBL
Match: A0A6J1DLE8 (dihydrofolate reductase-like OS=Momordica charantia OX=3673 GN=LOC111021534 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 3.9e-113 Identity = 196/244 (80.33%), Postives = 222/244 (90.98%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy TrEMBL
Match: A0A1R3J7I5 (Serine hydrolase FSH OS=Corchorus capsularis OX=210143 GN=CCACVL1_07293 PE=4 SV=1) HSP 1 Score: 365.5 bits (937), Expect = 1.8e-97 Identity = 170/238 (71.43%), Postives = 200/238 (84.03%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. ExPASy TrEMBL
Match: A0A6M2EP39 (FSH1 domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.9e-97 Identity = 169/243 (69.55%), Postives = 202/243 (83.13%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. TAIR 10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 212.6 bits (540), Expect = 3.7e-55 Identity = 93/212 (43.87%), Postives = 138/212 (65.09%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. TAIR 10
Match: AT5G65400.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 200.7 bits (509), Expect = 1.4e-51 Identity = 94/210 (44.76%), Postives = 132/210 (62.86%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. TAIR 10
Match: AT4G24380.2 (CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 165.6 bits (418), Expect = 5.1e-41 Identity = 74/164 (45.12%), Postives = 106/164 (64.63%), Query Frame = 0
BLAST of CsaV3_3G039400 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11 Identity = 64/225 (28.44%), Postives = 97/225 (43.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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