CsaV3_3G039210 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G039210
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 32224497 .. 32224974 (+)
RNA-Seq ExpressionCsaV3_3G039210
SyntenyCsaV3_3G039210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAGCCCAGAATCGCACGATGTTATTTAATTGCAACTCTGTCACCAGGGAAATCTCGATCTGTCGTTGATTTTTCCTTATTGGCGTTTTCTAATTCCGACCCTCTGCTTCGGGTACTCTTCCTTTGTTCCTATACTCTTCCATTTTTCCAATTATGAAATTAATGCTGTAAGCTGGTCAACTCATACTGGTATTTGTCACGATTTGGTATGTGGGGTAGCGAAAATATTTGGGGATTGATTTTGTTGTTGTGTTTTGTTTGTTGGGTTTTGATTTTTATGGCTTGTGTAAGGTTTGTTTCATGGTAGAATTTAGATTTTGATGTTGATGCTTATAGCTGAACTTTGAAGTTCTTGGTATTGGACTTTGGAAATAGGGGTTTAACTTTAATCCATGTTGCTGGCTGTTCTTTTCTTTTAGGTTCTTGGGAACTTGATTCAGGGTGGAAATGTTGTTTTGATTTCATGTGAATTGTAG

mRNA sequence

CAAAAGCCCAGAATCGCACGATGTTATTTAATTGCAACTCTGTCACCAGGGAAATCTCGATCTGTCGTTGATTTTTCCTTATTGGCGTTTTCTAATTCCGACCCTCTGCTTCGGGTTCTTGGGAACTTGATTCAGGGTGGAAATGTTGTTTTGATTTCATGTGAATTGTAG

Coding sequence (CDS)

CAAAAGCCCAGAATCGCACGATGTTATTTAATTGCAACTCTGTCACCAGGGAAATCTCGATCTGTCGTTGATTTTTCCTTATTGGCGTTTTCTAATTCCGACCCTCTGCTTCGGGTTCTTGGGAACTTGATTCAGGGTGGAAATGTTGTTTTGATTTCATGTGAATTGTAG

Protein sequence

QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDPLLRVLGNLIQGGNVVLISCEL*
Homology
[Close]
BLAST of CsaV3_3G039210 vs. NCBI nr
Match: KAE8651149.1 (hypothetical protein Csa_000737, partial [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-21
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDPLLRVLGNLIQGGNVVLISCEL 57
          QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDPLLRVLGNLIQGGNVVLISCEL
Sbjct: 1  QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDPLLRVLGNLIQGGNVVLISCEL 56

[Close]
BLAST of CsaV3_3G039210 vs. NCBI nr
Match: KAG6580828.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-04
Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 1   QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDP 36
           QKP IARCYLIATLSP KSRSVV+  LLA SNS P
Sbjct: 952 QKPGIARCYLIATLSPWKSRSVVELFLLASSNSAP 986

[Close]
BLAST of CsaV3_3G039210 vs. ExPASy TrEMBL
Match: A0A0A0LH14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812130 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.0e-22
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1   QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDPLLRVLGNLIQGGNVVLISCEL 57
           QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDPLLRVLGNLIQGGNVVLISCEL
Sbjct: 73  QKPRIARCYLIATLSPGKSRSVVDFSLLAFSNSDPLLRVLGNLIQGGNVVLISCEL 128

The following BLAST results are available for this feature:
BLAST of CsaV3_3G039210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651149.11.2e-21100.00hypothetical protein Csa_000737, partial [Cucumis sativus][more]
KAG6580828.13.1e-0480.001-acyl-sn-glycerol-3-phosphate acyltransferase 2, partial [Cucurbita argyrosperm... [more]
BLAST of CsaV3_3G039210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G039210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH146.0e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G812130 PE=4 SV=1[more]
BLAST of CsaV3_3G039210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G039210.1CsaV3_3G039210.1mRNA