
CsaV3_3G039090 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAAGAAATATATCACAAGAAATCACTAATGTAAATATTATTCTATAAATCAAATTTAAGTTATTTCTTGAAGTATAATGGAAGAAGGAAACAAGAATGTTGTAATTTGAAGGTATCATATTCATATATAATAGTTTTGCGCAAAAGGCCTAAAAAAGCCCAAAAGGCCTAAGAGCCCAAACGGCCATTCATTATTGCATTGCCCAAAGGCCGAAGGAAAACAAATTCTTCTTCTACAACTTACTTTTTTGCGATCTTCTCTGTGGCTTGTTCGAGAGTTTGTTATGGAGTGTAAGATCACAAAATAATATTAAAGTTTCATTTATAATACTTAAATGGAAATTAGTCACTTGTAATCTCCAATTGTTGTAATTGAATTTCGATTTGGGGGAAAAAAAAGTGTGGTTCTGGACGGTGCCCAAATGTTCTTGTTTCATCTTTGGACTTCAAGCACCTCCTTGATGAAGTTACGAACTGAAACAATGGTAAATTCAGAAGCAACTTCTTCAACACAAATCCAAGAAGACAATATGGGCATTGCCCTTTTCTACTCTCCAACCAATTTCCGCTACTTAAAACCCTAAATCTCAACGTGGCTCTGTCGTCTCTGTGTTCTTGCCTCAAAATTAATCTCAAAGTTATCCTTTCAGGTATTCTTTCCTTTAACCCCATTTCTTGAATCTTATGCCATGTTTTCGGTTTCCTTCTTCCTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCACGTGCTTTTCGGTTTTTCTTCCTATTTTTAAATCTCCTTCCTTTGTTTCTCCCTTCTTTGATTTGATCGTATTCTTTGCTTCTGTTCATCTTTCGCCCTTTGATTTCGTTTTTTTTTCGAATAAAATAAAATAATCGGGTTTTGTGATTCGATTTGTTTATCGAGTTTGTTCTTAGTTCTTTCATAAACTTTGTGTTCAGAGTTTGCTGATTCTTGGTTTTGCCATTTTTCTTTAGTCTGTGGTAATGGGGTCTCTTACTATCTCTTTTATTGTTGTTTCTCTTTTTCCTCCTTTCATTCCTTGTTAATTTTCTTTTGGGTTTGTGCATTTATACCCGCTTGCTGGAACTTTGGTTTGTATTTCGTAAATTGTAACATTATGCAAATACGTAATGCCAAAAATGTTTTTTTTTTTTTTTTTTGAATAATTGGAGCTGAACTTTAATTCTTAGTCATTGGATATTTGAGGTTTTATGAGCTGTGGTAGGTTGAAAATTGAAGTCATATTCTATAGGGTTGTTTATTATAATTTTGATTTTCATGGATAATAAAATTGTTTAGTATGTTGATCAAATCATTATTAAATGTAATGCTTGAACCAATTACAGTGTTATTTTCAAGATTGAAAATTGAAGGGGAGACAATGACTGATATGGAACACATTGTGTATTAGTTTTTTTTAGTGAAACAAGTAATTTGCCTGTTAAAGACTTCTAAGAAAAGGCTTATACCTGCTAAGAATGTATTCTACAGATACTAATAACTGTAAGGCGAATTGGGTTGTGCTACATATTGACAACATCAAAATTTTCAGCTTAATTGGACTATGAAGCCTAACCCTATCTTTGAAATACATGAAATGGTAGGTTGTCATTTTTTTTTCTTTTTCCTGAACAACACTACTGTTAAACGGCTTTCTGTTTTTGGAAATTTTCTCAATTTAGGCCTCGATTGTTAACCATTTGGATGGTTGTACTTTGTTTTTTGTTTTCGGATTTTGGAAATCACGCTTATAAGTTATAAACTCTACTTCTATCTATAAGTTCTCATACTAGTAGGGTAAGAGAACCAAGTAGCCTAGGTAGAGCCTTCCTCTTCCTATTTTTCGGTCTATCATTAGCTTCTTCCGACTTCTGTATACTTGTAAATGCTTCTCTACTTATTAGATTACCTCGTTGAGTTGAGACCAAGTAAGAACTTGAATATCTGCTCCTCTGCTATTTTAGAACTTAAGTAAATACCTTACTTTGATAGCTAACAATTTCCTCATGTATCTCATTCATTAGATTTATTTTCCCATTCGAGGAGAGAAATTGAAATCCATACAGCTTAGAATATTTAAAGGATTTCTATATAACTCCTCTTGTTATTATATATAATGTAAATATGCAATTAGTATACATCCTATAACAAGATGATAATGAAATGTATTGAACACTACTCGAAATGGTTTGCTTTTAGTACATAACCATACATTTTTTTTAACCAACGGAACCGTTCTTCAAAAAGAAAAATGTAGCTGAATGAATATGAATGTTGGATGATATAAGATGGTTGAATTAGTTATTTGTTGTGGAAGATCACTTTTGCATGGTCTGCATGGATGGTCATCTGTTTTGTTCTTTTCTTTGTCACCCTTTCTGTTTAATTTTAATTGGTCCAGTTCAATTAAATTGTTTGTAATTGTACCAATGTAATGCTTTCAATTGTTGATTTGTTCTGTTAATTCCTCAGGCTGCTCCACCATGAGTATTGGTTCAATTAGTATTTGTACAAGGAATGCTGTTCCTCTGAACTTACGCACACAGATGGGCAGCAACATCTGTACAGTGCTATCCCGGAGAACATCGACTTCATGCTGTTCCTATGGAATTTCAAGACCAAAGTATGCCGATCAATCCGTTACCACAATATCGTCTTGTTCACCAAATACTAGCCAAAGATTTCAGGCCGGAGGCTGTCTCAGTACTTGCTTCTCCAGACGGTCAATTGACTTTCAAGCTTTTACCGTTAAAGATTTGATCACCGATGGAGGATCACGTGGTAGAGACGTTGAAATTTCACTGGCATGTAAAGGTATGAATGTGAAGCTCTCAATCCCCAATGATGGGACATTTAGCAAAATCAAATATAACATGCGATGGCCAGAAAGATGGGCATCTGCTGGCTTAGTTTTTGGGTGGGTGGTTTGTTATTCAACTTCTGAACCAGTCCATGCTGAAGCAGCTTATGAAAAAGATGATAATGAAGAAAACTCTGATTCATCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCGACTATTCTGTTATCGGTGAGCATCTCAGTCTTCCTCTCCTTGTTTTGCGTTGCATGATCAATTGTTGCCATTGAAGTACCATTGGATTAAAGGGGAAATTGTGGTAATGTAAGCAACCTGTTTGTTCTGGACAGGAATTCCTGGAGATGGAAGATGTTTGTTCCGCTCAGTCGCTCATGGTGCTTGTTTGAGATCTGGGAAACCAGCTCCAAGTGAGAGCCTTCAGAGAGATTTGGCAGACGAATTGCGGTCCAACGTACGTTTTGTTTGTTTTTAAGAGAATACCATGGTTACACTTCCACACACCCTACTATACTAATCTAGATTCCATCTTTCGTTTCAATTTCTTTGCAAATTTGTATATGGATGCTCGGAACGATGAATCACACAAACACATCTTTCAGGTTGCAGATGAGTTCATCAAGAGACGTGAGGAAACAGAATGGTTAATCTCCCTCCCTTTCTCTAGTCTCTCACACAAAATGAGTTTCACATCAATGACTTTACCTGTGTATTTGAAATTGGGTTTTGCTACTTGTGTTGTTTAACAGGTTTGTTGAAGGCGATTTCGATACGTACATGTCCAATATGCGAAACCCACACGTGTGGGGAGGGGAGCCGGAGTTATTCATGGCTTCACATGTTCTTCAGTAAGTTATTTATTTCTCTATCAATCTCTGTGTTGTGTACTGCCTACTACATATCAGTGATTTGTTTATGACGAAGAGTGTTATTGTTGCTGCTGCTGCAGGGCACCTATCATAGTGTACATGTACGATAAAGATTCTGGTGGGTTGATTTCCATTGCTGAATATGGCGATGAATATGGCAAAGAAAATCCAATCAGAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCTAATCAAGGAGTAGGTAGATCTAAACTTTAGTCTTCTAAATTAATTATTTCTCAATCAAATTACATTCTCTTTTATTATATATAATAAATTTCTCT ATGAGTATTGGTTCAATTAGTATTTGTACAAGGAATGCTGTTCCTCTGAACTTACGCACACAGATGGGCAGCAACATCTGTACAGTGCTATCCCGGAGAACATCGACTTCATGCTGTTCCTATGGAATTTCAAGACCAAAGTATGCCGATCAATCCGTTACCACAATATCGTCTTGTTCACCAAATACTAGCCAAAGATTTCAGGCCGGAGGCTGTCTCAGTACTTGCTTCTCCAGACGGTCAATTGACTTTCAAGCTTTTACCGTTAAAGATTTGATCACCGATGGAGGATCACGTGGTAGAGACGTTGAAATTTCACTGGCATGTAAAGCTTATGAAAAAGATGATAATGAAGAAAACTCTGATTCATCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCGACTATTCTGTTATCGGAATTCCTGGAGATGGAAGATGTTTGTTCCGCTCAGTCGCTCATGGTGCTTGTTTGAGATCTGGGAAACCAGCTCCAAGTGAGAGCCTTCAGAGAGATTTGGCAGACGAATTGCGGTCCAACGTTGCAGATGAGTTCATCAAGAGACGTGAGGAAACAGAATGGTTTGTTGAAGGCGATTTCGATACGTACATGTCCAATATGCGAAACCCACACGTGTGGGGAGGGGAGCCGGAGTTATTCATGGCTTCACATGTTCTTCAGGCACCTATCATAGTGTACATGTACGATAAAGATTCTGGTGGGTTGATTTCCATTGCTGAATATGGCGATGAATATGGCAAAGAAAATCCAATCAGAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCTAATCAAGGAGTAGGTAGATCTAAACTTTAG ATGAGTATTGGTTCAATTAGTATTTGTACAAGGAATGCTGTTCCTCTGAACTTACGCACACAGATGGGCAGCAACATCTGTACAGTGCTATCCCGGAGAACATCGACTTCATGCTGTTCCTATGGAATTTCAAGACCAAAGTATGCCGATCAATCCGTTACCACAATATCGTCTTGTTCACCAAATACTAGCCAAAGATTTCAGGCCGGAGGCTGTCTCAGTACTTGCTTCTCCAGACGGTCAATTGACTTTCAAGCTTTTACCGTTAAAGATTTGATCACCGATGGAGGATCACGTGGTAGAGACGTTGAAATTTCACTGGCATGTAAAGCTTATGAAAAAGATGATAATGAAGAAAACTCTGATTCATCTCATGTCAAACTCTCTCATGGAAAAAAGGTTTACACCGACTATTCTGTTATCGGAATTCCTGGAGATGGAAGATGTTTGTTCCGCTCAGTCGCTCATGGTGCTTGTTTGAGATCTGGGAAACCAGCTCCAAGTGAGAGCCTTCAGAGAGATTTGGCAGACGAATTGCGGTCCAACGTTGCAGATGAGTTCATCAAGAGACGTGAGGAAACAGAATGGTTTGTTGAAGGCGATTTCGATACGTACATGTCCAATATGCGAAACCCACACGTGTGGGGAGGGGAGCCGGAGTTATTCATGGCTTCACATGTTCTTCAGGCACCTATCATAGTGTACATGTACGATAAAGATTCTGGTGGGTTGATTTCCATTGCTGAATATGGCGATGAATATGGCAAAGAAAATCCAATCAGAGTTCTGTACCATGGTTTTGGCCATTACGATGCTTTGCAAATTCCTGCTAATCAAGGAGTAGGTAGATCTAAACTTTAG MSIGSISICTRNAVPLNLRTQMGSNICTVLSRRTSTSCCSYGISRPKYADQSVTTISSCSPNTSQRFQAGGCLSTCFSRRSIDFQAFTVKDLITDGGSRGRDVEISLACKAYEKDDNEENSDSSHVKLSHGKKVYTDYSVIGIPGDGRCLFRSVAHGACLRSGKPAPSESLQRDLADELRSNVADEFIKRREETEWFVEGDFDTYMSNMRNPHVWGGEPELFMASHVLQAPIIVYMYDKDSGGLISIAEYGDEYGKENPIRVLYHGFGHYDALQIPANQGVGRSKL* Homology
BLAST of CsaV3_3G039090 vs. NCBI nr
Match: XP_031739408.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X2 [Cucumis sativus] >KAE8651144.1 hypothetical protein Csa_002474 [Cucumis sativus]) HSP 1 Score: 584.3 bits (1505), Expect = 5.6e-163 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. NCBI nr
Match: XP_008443092.1 (PREDICTED: OTU domain-containing protein At3g57810 isoform X2 [Cucumis melo]) HSP 1 Score: 565.1 bits (1455), Expect = 3.5e-157 Identity = 281/288 (97.57%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. NCBI nr
Match: XP_011652109.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Cucumis sativus] >XP_011652110.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Cucumis sativus] >XP_011652111.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X1 [Cucumis sativus]) HSP 1 Score: 560.8 bits (1444), Expect = 6.6e-156 Identity = 286/336 (85.12%), Postives = 286/336 (85.12%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. NCBI nr
Match: XP_008443087.1 (PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443088.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443089.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >XP_008443090.1 PREDICTED: OTU domain-containing protein At3g57810 isoform X1 [Cucumis melo] >KAA0043710.1 OTU domain-containing protein [Cucumis melo var. makuwa] >TYK25424.1 OTU domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 541.6 bits (1394), Expect = 4.2e-150 Identity = 281/338 (83.14%), Postives = 283/338 (83.73%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. NCBI nr
Match: XP_038903221.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 isoform X2 [Benincasa hispida]) HSP 1 Score: 512.3 bits (1318), Expect = 2.7e-141 Identity = 257/288 (89.24%), Postives = 268/288 (93.06%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy Swiss-Prot
Match: Q8LBZ4 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OS=Arabidopsis thaliana OX=3702 GN=OTU4 PE=1 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 5.8e-70 Identity = 139/248 (56.05%), Postives = 173/248 (69.76%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy Swiss-Prot
Match: Q8GYW0 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thaliana OX=3702 GN=OTU3 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14 Identity = 57/175 (32.57%), Postives = 82/175 (46.86%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy Swiss-Prot
Match: Q6GM06 (Deubiquitinase OTUD6B OS=Xenopus laevis OX=8355 GN=otud6b PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.4e-07 Identity = 38/139 (27.34%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy Swiss-Prot
Match: Q96G74 (OTU domain-containing protein 5 OS=Homo sapiens OX=9606 GN=OTUD5 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 5.3e-07 Identity = 36/138 (26.09%), Postives = 61/138 (44.20%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy Swiss-Prot
Match: Q7ZV00 (Deubiquitinase OTUD6B OS=Danio rerio OX=7955 GN=otud6b PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06 Identity = 43/139 (30.94%), Postives = 68/139 (48.92%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy TrEMBL
Match: A0A1S3B7A9 (OTU domain-containing protein At3g57810 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 1.7e-157 Identity = 281/288 (97.57%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy TrEMBL
Match: A0A1S3B6T1 (OTU domain-containing protein At3g57810 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486791 PE=4 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 2.0e-150 Identity = 281/338 (83.14%), Postives = 283/338 (83.73%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy TrEMBL
Match: A0A5D3DP86 (OTU domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005670 PE=4 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 2.0e-150 Identity = 281/338 (83.14%), Postives = 283/338 (83.73%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy TrEMBL
Match: A0A6J1DJ08 (OTU domain-containing protein At3g57810 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021529 PE=4 SV=1) HSP 1 Score: 490.0 bits (1260), Expect = 6.9e-135 Identity = 247/290 (85.17%), Postives = 260/290 (89.66%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. ExPASy TrEMBL
Match: A0A0A0LBW9 (OTU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G810520 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134 Identity = 257/336 (76.49%), Postives = 257/336 (76.49%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. TAIR 10
Match: AT3G57810.1 (Cysteine proteinases superfamily protein ) HSP 1 Score: 266.5 bits (680), Expect = 2.4e-71 Identity = 148/285 (51.93%), Postives = 189/285 (66.32%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. TAIR 10
Match: AT3G57810.2 (Cysteine proteinases superfamily protein ) HSP 1 Score: 265.8 bits (678), Expect = 4.1e-71 Identity = 139/248 (56.05%), Postives = 173/248 (69.76%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. TAIR 10
Match: AT3G57810.3 (Cysteine proteinases superfamily protein ) HSP 1 Score: 265.8 bits (678), Expect = 4.1e-71 Identity = 139/248 (56.05%), Postives = 173/248 (69.76%), Query Frame = 0
BLAST of CsaV3_3G039090 vs. TAIR 10
Match: AT2G38025.1 (Cysteine proteinases superfamily protein ) HSP 1 Score: 81.6 bits (200), Expect = 1.1e-15 Identity = 57/175 (32.57%), Postives = 82/175 (46.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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