
CsaV3_3G038970 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGCGGATTAGTGAATGCCCGAGCAAGTGAAGTCAGAATCGTGAAATAGACAACGAGAGTAAAATACGTAAACAGACGCTGTTGGAGCATTTCTCCAAAAAAAGACAGTCGAGTTTGATGTTCTCTGTTTTCATGGAACAAAGAATCAAGAAGATTTAAAGCAAAGAAGAAGTCAGAAGAACGAAATTTCAAGTTAGAATAGAAACGTACAAAAAGATTCAGAGTAAAACATTGAAGCGTTTCTTGTTACTCTTTCTTTCTCAGTAACGAAACGTGCTTCCAACAAGAAAAACGGCGGCATAAGAAGTTCTTCTGAGGAAGGAAGTTAGGGTATGGAAAATGTACCTGAGAGAGAGAGGGAGAGCAAATGGAAGGGATTTGTATGGACGCAAGTGAAGTGTGAAAAAACTTGCCTGCAGAAAATGGTAGAAAGTTAAGGCGATGAAGACGACGAAGTTTTTGTGATTGTGAGAATTTGATGAGCTGGCGTCCACGTCGGCTGAAACGGTTAGACCGTTGGAAAATGCTGGAAGGATATATAAATCACAATACTAATCTTCTTAAGTTGGAATTTAGCCGTTGGAATTTTCACTCTATATTCAACTACTTTGTCATGGTTCTTCGAGATTAAAAAAAAAAAATGTTATTAGTTGAAATTAAAAAATAAATTGGAGTTTGTGAAATTTTTGGGATAGTTTCTTAGTTTTTATTTAGAAAAATTGTTAATTTTGTGTACAAATATTTGTTAAAAAATTTCTATTTTGAATAACTTTTAGTTTAGTTTATTTAGATACTCGCATTCCGGTTGTCACATTTTCACAACACTATAGACATTGACATGGATAGATAGATCGGCTTTCAGCACCTAAGCGTAGACACTAAACAGCACCTAGCGTGTATTGGCCTGAACTCAATACCATATTTTTGTCCCAAGCTATGGCGGAATCGGATTTCAGGCAAACCAATGAACCAGACGAAGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGACGATACTACCTCTTCCAAATCCATATTCAGAAAGGTAACAACTACTAATCTTTGCTTTAACTCTTCACCACGGATTTGCTGCTTCATTTTATCTAAATTCTAGGGTTAGATACTCTATTTATTTTTTATTTTTTTTCTAGGGCTCTAACTGAGGTTTGATTACAGGTTGCTGCTAATAAAACCCCTGTTGTCCAATCATCGAATAAGAAACCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAACACGAAGAGGACGAACAGACATTGGCTAGAATAGAGGCTCCGATTCCACAATCCAACATTGGGTTTAAATTGTTGAAGCAGATGGGGTACACTCCCGGGGCAGCTTTGGGCAAGGAGGGATCCGGACTTGCAGAGCCTGTGGGACTTGAGATTCGACGGTCGCGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGTTGCAATGGAGAAGTCGAAGAATTGTGGTCAATTACAACAAGGCCAAAGCAGCACTTGATCAATTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGGACAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGTACAGTTCTTTTCTACAAACTTCACCATCCTCCACCCCCATTTAGTTTCAAATAAAGCTTCTCTGTTTTCTATGATATTGGTAGGTCATTGTTGATCATTTATTTGCATAGTATGAAATTGATTTGCATTCTGAAGCTGGAGTTAGTTAAAATCATATTACCTTATAATTGACCATTGGCTTGCATAGTTTGAAATTGATTTGAGTTATAGAGAGGGTTTAGGGTTAGGCTTGTGATATTGGCCCCTCGTCAAGCTCTATGTTTTTCTTTAGGGGGACAATTTTTTTTTTTTTTTTTTTTGGTATTGTACGTTAGGTCTTATTGTTATTGGCTTGAGTCCCTTCCTAGTGGGACTTCCTTTTCGTGGGCTTGTTTTTAGATGTCATTGTAATCTTCCATTCTTTCTGAATGAAAGTTCGATTACAATAGGAAAAAGGTAAACTTAGTAGCCTGTGGAGAGTTGCAGTTTTAGCATGAACTAAGTAGCAATGCTTTGGTAAAGGGAATGCCACAAATTCCTATCAAACTGTGGTGGTCTTTTTTTTCCCATTTTAATGGGGTTTACAGGGTACTTCATTGTCAATGCTCTGATCAATTGAATGCCTTTCGTGACTTTTATTTCTTGGATCATTTTTCTTGACCGTTTATTGGAAGGGTCTGGTGGATGCTAATAAAGAAAAATCATCTGTAGGATGAAAATCTTGGTTGATGGAACCAGTTTTATTTAAGCCCCCTTTGATAACTATTCGGTTTTTTGAGTTTTGAAAATTAAGCTTATAAATTATAAACAACTCTACATCTACCAATTGATTTCTTCGTTTTGTTGTCTACCTTTTAGGAATGTTTTAAAAAACCAAGTCGAGTGTCGAAAACTGAAAAAACTAGTTGTTAAAGCCTTGTTTTTATTTTTGGAATTTAGCTAAGAATACAAATAGTTTTGTTTTTAGAATTAGGCTAATAATACAAATATATAGTTAGGAAGGATGATTACCATGGTAAATAAGTCTGTAAGAGAACATGCATAATCTTTACTAGCCGAGGGGAGATTTGAGAGCCTCCCACTACTCTTGTCTCCACCTAAAATGATTTAGTGATTGTTCAAAAGATACCCTCCTCGCAATTAACTTGCTAAACAACCCTACACAAACTTGGCCATCTAAATAACCGGATACCAAAGAAGCTCACACACATTACGTAGAGAGGAAACTTGTACACTTCAATAACTTTAAAACTCAAAGACCCATTGTACAACCTAAATAACAATTGAAATGATGTTTAAGTAAATCTGTTATAACAAAATTAAGTTTTATCATTTATGTGCATTCAATATCTTTTATGATGAGACTCCTTTTCTAGACATAATAACCTGCCTGTCAGGCCGTTACACCATAATCTCACTCTATTTAAATCAAATGAGCTTTTGCTTGGGAATTGGAATAAAATATTCTTGTGATGGATCCAGGATTTGGAGGATATTTTGATGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGGTGAGTGTATTACACCATTCTTTAAAGAGAATTTGTTCAAGCATGTGGCATTTTACTTACCGTAACATCATTCTGCTGTTGATGCCAGTACGACTCAATGGATTCCCTCCTATCTAACTGCCCTGGAATTAGTGAAGATGATCACTGAACTAATTTCCTTTCCCTCCAAACGGTTTGCCTGAGATGGGATTTTTGGAAGTTGGCCCAATGGAAGAACCACCATAAAATAAACAAGGACATAGCGTAATCCATGAAGTGCTTAAAACGGTGCTTTTAGGTACTTTTAGATCATCCCTACCATGTCCATTGTTGTTAACGAGTCCCCCCTTCCTATCGAGGTTTGCATCATGTGCTTTAGTGTGCCTTTTTTGTCAACGTTTTCAACACAAACGGCGTAGTCTCTCAGAAAGCAATCCGATCTGAAGTTGCTGTTCGGAAGTCGGAATAGCAATGCTCCACTTCTAGAATTACTTATCCTAGTCAATGGATAGCCGGACATTGAGCAAGTTTGTTCAGATTGAGGCATAGAAGTAGGAGTTCAGAACACCAAGTCTGCTTTATACAATCATTACTTGGGCCAAGCTCCTTCCTATTTGTGTCCCTTTTAGTGCAAAATATAAGAGAATTTGAACGGTAATGTTGGATTTGAGTTTCCTGACAGCGACTCGCACAAATTTGGCGGGTAAGTTTTCTGTGAAGTTAATGTTGAATATTCTTTAGAAGGGTATCTTAATTTATTCAAACTTAGAGACATTAATCTTTTTGTGGTATTCTGAATTTAACGAGCTTCTCCGCTTTTTATTGCATATATAATGGTTAGTTGCTTGGTGAATCTGGTGGCTGCTTGATTTTTTACTTTCAAGAACAATGATATGGAAATTTGTCACAAATTTAC ATGGCGGAATCGGATTTCAGGCAAACCAATGAACCAGACGAAGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGACGATACTACCTCTTCCAAATCCATATTCAGAAAGGTTGCTGCTAATAAAACCCCTGTTGTCCAATCATCGAATAAGAAACCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAACACGAAGAGGACGAACAGACATTGGCTAGAATAGAGGCTCCGATTCCACAATCCAACATTGGGTTTAAATTGTTGAAGCAGATGGGGTACACTCCCGGGGCAGCTTTGGGCAAGGAGGGATCCGGACTTGCAGAGCCTGTGGGACTTGAGATTCGACGGTCGCGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGTTGCAATGGAGAAGTCGAAGAATTGTGGTCAATTACAACAAGGCCAAAGCAGCACTTGATCAATTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGGACAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGATTTGGAGGATATTTTGATGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCAATGGATTCCCTCCTATCTAACTGCCCTGGAATTAGTGAAGATGATCACTGA ATGGCGGAATCGGATTTCAGGCAAACCAATGAACCAGACGAAGAAGAAGAAGACTACATGGGCGACCTCTCTAAGTTGCTTCCTCCAGACGATACTACCTCTTCCAAATCCATATTCAGAAAGGTTGCTGCTAATAAAACCCCTGTTGTCCAATCATCGAATAAGAAACCCAAAACCTTCAATTGGCAAGAACAGCGCAGACGGGATAGAGAACGGAAGCAACACGAAGAGGACGAACAGACATTGGCTAGAATAGAGGCTCCGATTCCACAATCCAACATTGGGTTTAAATTGTTGAAGCAGATGGGGTACACTCCCGGGGCAGCTTTGGGCAAGGAGGGATCCGGACTTGCAGAGCCTGTGGGACTTGAGATTCGACGGTCGCGAGCTGGAATTGGCAGGCAAGATCCGATTAAAGAGAAGGTGAAGCAAGAAGAGATTAGAGCTGAGAAAAAGAGGAGCCATCAGGAGGCCTTGATGGAGGAATTTGGGTCTCGACAGAAGTTGCAATGGAGAAGTCGAAGAATTGTGGTCAATTACAACAAGGCCAAAGCAGCACTTGATCAATTGGAGAATAAGGAAGTTGTGGAGCCAGAGAAGGACAATGAGGAGGAAGGAGAACAAGAAGAAGAAGAGGAAGAGATTATAACAGAAGAGGATTTGGAGGATATTTTGATGAAACTGAGAGATGAACATCGATATTGCCTTTTCTGTGGATACCAGTACGACTCAATGGATTCCCTCCTATCTAACTGCCCTGGAATTAGTGAAGATGATCACTGA MAESDFRQTNEPDEEEEDYMGDLSKLLPPDDTTSSKSIFRKVAANKTPVVQSSNKKPKTFNWQEQRRRDRERKQHEEDEQTLARIEAPIPQSNIGFKLLKQMGYTPGAALGKEGSGLAEPVGLEIRRSRAGIGRQDPIKEKVKQEEIRAEKKRSHQEALMEEFGSRQKLQWRSRRIVVNYNKAKAALDQLENKEVVEPEKDNEEEGEQEEEEEEIITEEDLEDILMKLRDEHRYCLFCGYQYDSMDSLLSNCPGISEDDH* Homology
BLAST of CsaV3_3G038970 vs. NCBI nr
Match: XP_004136577.1 (G patch domain-containing protein 11 [Cucumis sativus] >KGN59316.1 hypothetical protein Csa_001400 [Cucumis sativus]) HSP 1 Score: 491.5 bits (1264), Expect = 4.5e-135 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. NCBI nr
Match: XP_008443073.1 (PREDICTED: G patch domain-containing protein 11 [Cucumis melo] >TYK25414.1 G patch domain-containing protein 11 [Cucumis melo var. makuwa]) HSP 1 Score: 481.5 bits (1238), Expect = 4.6e-132 Identity = 255/260 (98.08%), Postives = 258/260 (99.23%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. NCBI nr
Match: XP_038903037.1 (G patch domain-containing protein 11 [Benincasa hispida]) HSP 1 Score: 454.5 bits (1168), Expect = 6.1e-124 Identity = 241/260 (92.69%), Postives = 252/260 (96.92%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. NCBI nr
Match: KAA0043719.1 (G patch domain-containing protein 11 [Cucumis melo var. makuwa]) HSP 1 Score: 431.0 bits (1107), Expect = 7.2e-117 Identity = 230/260 (88.46%), Postives = 233/260 (89.62%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. NCBI nr
Match: KAG6580816.1 (G patch domain-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017567.1 G patch domain-containing protein 11 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 426.8 bits (1096), Expect = 1.4e-115 Identity = 228/261 (87.36%), Postives = 247/261 (94.64%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy Swiss-Prot
Match: Q2KI19 (G patch domain-containing protein 11 OS=Bos taurus OX=9913 GN=GPATCH11 PE=2 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 2.1e-18 Identity = 83/272 (30.51%), Postives = 138/272 (50.74%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy Swiss-Prot
Match: Q3UFS4 (G patch domain-containing protein 11 OS=Mus musculus OX=10090 GN=Gpatch11 PE=1 SV=2) HSP 1 Score: 93.6 bits (231), Expect = 3.6e-18 Identity = 78/269 (29.00%), Postives = 134/269 (49.81%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy Swiss-Prot
Match: Q6DGZ0 (G patch domain-containing protein 11 OS=Danio rerio OX=7955 GN=gpatch11 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.7e-18 Identity = 82/275 (29.82%), Postives = 141/275 (51.27%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy Swiss-Prot
Match: Q8N954 (G patch domain-containing protein 11 OS=Homo sapiens OX=9606 GN=GPATCH11 PE=1 SV=4) HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17 Identity = 81/268 (30.22%), Postives = 141/268 (52.61%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy Swiss-Prot
Match: Q6DF57 (G patch domain-containing protein 11 OS=Xenopus tropicalis OX=8364 GN=gpatch11 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.0e-16 Identity = 75/269 (27.88%), Postives = 133/269 (49.44%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy TrEMBL
Match: A0A0A0LGZ2 (G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G809920 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy TrEMBL
Match: A0A5D3DP78 (G patch domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005560 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132 Identity = 255/260 (98.08%), Postives = 258/260 (99.23%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy TrEMBL
Match: A0A1S3B6R8 (G patch domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103486779 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132 Identity = 255/260 (98.08%), Postives = 258/260 (99.23%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy TrEMBL
Match: A0A5A7TRA2 (G patch domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00480 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.5e-117 Identity = 230/260 (88.46%), Postives = 233/260 (89.62%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. ExPASy TrEMBL
Match: A0A6J1F5D4 (G patch domain-containing protein 11 OS=Cucurbita moschata OX=3662 GN=LOC111442279 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115 Identity = 227/261 (86.97%), Postives = 247/261 (94.64%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. TAIR 10
Match: AT3G57910.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 286.6 bits (732), Expect = 2.0e-77 Identity = 158/252 (62.70%), Postives = 204/252 (80.95%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. TAIR 10
Match: AT3G54230.1 (suppressor of abi3-5 ) HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. TAIR 10
Match: AT3G54230.2 (suppressor of abi3-5 ) HSP 1 Score: 49.7 bits (117), Expect = 4.2e-06 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. TAIR 10
Match: AT5G08535.2 (D111/G-patch domain-containing protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05 Identity = 26/76 (34.21%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of CsaV3_3G038970 vs. TAIR 10
Match: AT5G08535.1 (D111/G-patch domain-containing protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05 Identity = 26/76 (34.21%), Postives = 42/76 (55.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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