CsaV3_3G038940 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038940
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	UBP1-associated protein 2C-like
Location	chr3: 32018744 .. 32024685 (+)
RNA-Seq Expression	CsaV3_3G038940
Synteny	CsaV3_3G038940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGCCGAAGAAGCCCTAACTAAGGACTGTGTTCGCTCCATTTTTCAAGCTTTCTTCAAAGAAGAGCTCACGGCTTTACTATCTCTTCAGCGCCAACAACGCTCCATAAACCTTCACCAAGATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAGACCGTCGGCAATGCCGAATTTTCTTCTCTCGAACATTTGCGAACTCTCCTCGAACCACTTCCCAAGCCTCAACTCGTCGATCTCCTTGCCAGACTGTGCGTCTCTTCTCCTTTCTGACTCTATTATATTAAACTACACTTTCATTTGCACTTCCTTCTTCTTATTTGTCTTCGTGAATTGAATACTCGTTATTAAACAGTTAAAGAAACTTGAAATTTGTTTCTAGTTTGTTAGTTAGTTTTTCTTCATTGTAACTAATTATTAGCCTTTCTCGTATGTGTATAAATACCCTGAGTAAGTCATTAATAAAGATGAGAAACTCAATTATATTCTTCCACCCCTTTAATACTCGCGTTTTAGTTTCTTAGTTCTACTTCTTTTTCGGAACTGATCTTGCCTTCTGTTTACTAGGAAAAAAATGTTATTGTTTGAGATATGGGGTTCAAGAGAATTTGGTAAGCCTAGCGTTAAGTCATTTATGTGACTGTTGGATGACCTTTTCTAGGGTTTTGGGTTTTTAGTTCCCATTGTAACTGAATTTTGGAATTTTTTTGGTGAGTTGATGGATGGGGCATTCCCCAATGTAAACCCACCTGTAAACATCTCCCCAAGTTTTAAGACGGTCTTGGTTCTAATGCTGGAGTTAGTCTTTTCCGAAGACGTCCTTGTGCTCGACGAGGAATTCAATGTTACTGTTTGAGAGTTTGTTATATTTCAGATATAATAAGACTTGCAGTTCTAACTGATAGAGATGTCATTGACTGTTTAGTTTCGATCTCATTACTTCGATGTCACCAAATAGCCTTGTTCTTAGCGTTTTTTTTAACCCTAACTGGGTTGTTCGGGTCCTTCACTCCTTGAATCATGCTTGTAGAGATCCCCCCTCCACCCCACATTAATCCCAATATGTTGGAGAGTCAACAGGGATTTTAAGGTTTTAAGTTTTCGTCTTGGAGCTTCAACCCATGACCTTGGAAGGTATCTCCAAGCATTTGAAGTCTTTACTATTAGACCCCAAATGGTTGTTTTTTTCTAAGAATTAGCACGGAATTTGGCCTTCTTACACGAACGTCAGTGAAGCCTCATTTCGTAGCCTTAAAGAAATAGTATCTCTATTCCTTATGAGTTATGAGCAGATACGTTTTTTATATATTACAAAGCACATGAAGATGATGTGCTTCGTTTTGTCTAAGTGTGCCCTGTTGAGATTTTGTTCATTTGAATTCTATTCGAATTAAATTTAATTCAACAGAAGCAATTTATCAAAGAACTCTCAAATAATTTATTAAAGAGTTACCCTAACATTTGACACAGATGCGACATGTCAATTTTCGAAAAAGTAAGACAAAACACAGTGGAAACATGTTAATTTTTTTTTTAACAAGAAAAAGATAATCTTCCATGGATGCATGGAGTTCTCTTGGCCAAGAATGAAGGCAAGAAACTATCACTCACATTGAATGAACGTCTTCTATGTTTCTACCGTGCATATGCCTCTAGATTATTTACCGATCGAATAGTCTTTCTTGCAGTGTAAATATTTATTACCGAACTTCAAATTCTTCCATAAGGACAGAAGATCCCCAAACAGCGAAAGAAAACCCCACTTCTCAAATTGGAAAAAGAAAATCCCCTTCTCAAATTGCCACCTCACCTGCGTATTCAACAAATAAATATTTCATCAGAACTTATCTTCAAGTCTAACACCAAACAATATTTTTTTTTATATGAAAACTTATCTTTAATAAATTGCTTCCGACAAAATAATATCACATTGTTAATATTTCAAATCGAATTCAGATTTTACTTATAAGTTCAATAATTATCCCAAATGAATTTTAACTCGAAACAATTTTGTTTGAAAAAAATCTTGTCTTTTATAGTTCTTGAAAAAAGAATCCTTTGAAAGTTACTTCCATTTCTAAAACTGTGGTAAGAATGATTTTTTGTGGGTATTACACAGTGGAAATCACGAGGGTGTTGCTTCAATTGTATGCTGTGTGATTGACATGGTGAATGTGTGTTTATTTGCGTTGCATGTTGAGGCATAAAGAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAACCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGTGAGTGCAGTTGGTTGTTGCTTGTGTTTGCCTGTCATGTTTGTGATTGTTCTTTAGACTCCTATGTTTCTAGTCCCGAAACATTAAACCTTGGAATCCCTTTCTTTTTTCTTTTAGTAACATTTTTTCTCACAGGCTTCTGTCTCCTACAAAGAACAGTGTTCAGTTGCTTTTTTTCCTAATGAAGTTGTTATAATTATATCATGTTCAGGCATTTAGCGTGCATGGGGAAATTGAAGAAGGAGCTGTTATCTATGACAAAGCAACAGGGAAGTCCCGTGGATATGGTTTCATTACTTACAAGCACATGGAGTCAACTAAAGCTGCTTTAAAAGCGCCTAGCAAAATAATTGAGGTAAGCACTAAATCCCTTCCAAATGATGTGGAAATATTTTCCATTTTATAAGACAAATTTTTGGAGTTAAATGTGTGAGAAATAGTTGGGATGGACGATGGAGTGAAGCAGTTAGCATATCTTATTTGGATTAGGAATTATAAGGAATCATAAATCCTCCTTTTTCTAGAGTTCAGAGCTCCCTCCCCCGACCCAAAAAAAAAACCATCCTGTATCCTTTTGAGTGAGATTTATTTTGAGCGTTGCAGTTCTTCCCTTATCACTTTTGAGTAGGTTCATCATCTCCAATCATTTTATTAATAGTTGGTTATTGTCGAGGAAAGTTTTGTTTATCCATCAATTTTAAAAAAATAGTTGGTCTCGTAGCCACCAAGGGCAGTCCCTTTGGTTGGGGCCCGTGGTCTCTCTTTTCTTTGAGTTTAGCAAATACCGGCCGGTAATTGAACCATGGACCTTTAGAATATATAGAATATATGGTAATTGGTGTCTTATCCACTGCACTATGTTTGGATTGGCAAGACTTGCAGTCTCTCAATAAACCTACATGGAGGTTGAGTATGTGAATCAACAGGTTAGTATAATAAGAAAAAAGCCTTGATGTCGGCAAAGTCTAGGCCTTGGGGCAGATGGAGAATTATAGGCTTGAGCAAAAATAGTATTTGGTATCATCATTTCTTTGTTTAATAGGACGATAGCTTTTGGCTTATGGAGGGGTATATTTTTTTTCATAATTTGTACTGAATCTAATTTTATAAAGATTGAAACTTAATAAGACTCCTATATGCAAGTTGTATATCCTGTTTTTGACGAATAATTCATAACTTCAACAAAATTTATGCCTTTAAAGAAAGATATGAAGGGTAGTTGATTGATTGGCTACCCATCTGCAAGCTAAGGATAGATAAGATGAACTTTTAATGGACGCAAGCATCTTTTTGTTCCACCATATTATAGATGCTGGCTTTTTCTAAGATGGTTCTAAGGGAATTCAAATATATGTATTTGATCAATACTTCATAATTCTAGGGTCGCATGGCTGTCTGCAATCTGGCATGTGAGGGTCTAAGTGGATCAAGTACAACTCCAGATTTAGCTCAGAGAAAGCTGTACATTGGTGGTTTATCACCAGATATTACAAGTGAAGTATTGCTGAATTTCTTTGGAAGGTATGGTGACATAGAAGAAGGTTCAGTTGCCTATGATAAGGATACAAATGAATCACGGTTAGTAACATTTTTTGAAATTATTGTTACTTTACTTTCTCCATTGATGTCTTAATTTTCTTTTATCTTATTGGACTTACATATGCCGCACCTATAAATTTCTACTTCTTTGTGTGTAGAGGGTTTGGATTTGTTACCTATACCACCGCAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGTGAGTGAGTAATGAGACTTGCTAATAGCTTTTTTGAAACAGATGGCTTAATTTTATTACAGAAGATTCCAATATTTTAATGCTTAGATATGTGGTAATTTATTTTCGAGCAAAAAAATAAAAATGTCCAGAATTGAAAGTTAGAATTGTTTGATTTTGAACAGGTACAAAAATATCTGGTTTAGTTCAACTTATTTGCCGAGTATGTAAGAAGTCTTACATGACTTCTCTCATCAAGCACAAGCGATCTTTTAGATTAAGTGTAGAATTATGGAAGCATTTTTATCTTTAACTTTGGAAGTGGGAAAGGGGTAAGAAACAAAAACAATATTATAGAAGTATAAACGGAGGCTTTTTGTAAATTATTAAAATGAAGAATGTTTTCACAAGCAAGAGCCATACTACAGCTGTTTAGTACAACTTGTCAAATTATTTTGAATGATTTTTAACCTTTGATGAATATTATAATATATTAATGTGGTGAGTGGTTGCAGGGAAGGAACATCATTGTGAAGCTTGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTATCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGCGGTGTTGCCCCTGTTGGCTATGCTTATCCTCAAGCTCTTGGATCATATCCTGCTTCGTATCCCAGTCCTACGACAGCGCATGCTTCATATGCAAGCCAACCCCAAATGCCATATCCCCATCAAGTGATTGGAAAGAAAGATGCTACTGGACTTCATCCCATCACACCTGCTGGAATGGGAGGCTATCCATATTATATGGCGAAACAATAGCTATGGATGTGATCTATGGGAGGTGAATTTCAAAACGTGATATTAACTTCCTTTACCATCCAGATTTAGCCTACATGCAAATAATATGTTTATGTCATTTTTATTATTGGAATTATGCATAAACGTACTATAAATTTGTAGGTTTTAGTTTGGACTCAACTTTTACATTAATGTCAATGGAAAATCTGATGATCTAATTGAAGAAATATTTGCACTGGGTTAAAATGTAGGGTTAAATTTTGTTACTCGTTTTAAAGTGCCACGACAAGTTTAGTTTAGGGGAGAATGTGATGTAATATGAAAAGGGGAATTTGCTATTTCAATAGAACAATGGAAAAAATTTCATTTATTCCATTGTCTTTGTGCAAGGATGCTGCTGCTTATTATTAGTTTTTATCATTCAATTGTTCATGGGTAGCTGGTTTTTGCAGGAACCTTGACATTAGTAAGCGCCTCTAGAAATTGGTCGCTCGGATTTGATTGAAGTGTGAACATTAAAGGTGGCCTAGCGAAAATTTTCCAAGTAAACTCTTCATCTTTTTGTTCCTTGTCTGTGTAAAATTTATTACCACCTAGAAATTATGCATACTAGTCATTTTTAGGATTAGAGGTAGTTAATCTTGAGCATGGAAAATATTGGTGTTAGCTATTTAAATATTGAACATACGACAATATTCTTGATATTCCTCTTCTGTCAATCATATTCTCTGAATTGCATTTTATTATTCCTGTCTAATGAAGTTGGAATTTAGAAAACGAGTCTTTATGTTAGTCATGTTATTCCTCTTCTGTCACTATATCTTCAAATTTAGTCATGTTATTTTAAATCTTTATGTTAGTGTTTATTGTTAGTTTAGTGAACTAATTTGGAGGTTTATTAGTGGATTTTTTTTCCAGAATAATAAATAATTTATACTTTATGAAAAAAAAAAACCACCCAGAGACAAAAACTCATTACACTTCATACTTGATTTTGTGATAGCATATAAATAGTTTGTCCTTTT

mRNA sequence

ATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAGACCGTCGGCAATGCCGAATTTTCTTCTCTCGAACATTTGCGAACTCTCCTCGAACCACTTCCCAAGCCTCAACTCGTCGATCTCCTTGCCAGACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAACCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGCATTTAGCGTGCATGGGGAAATTGAAGAAGGAGCTGTTATCTATGACAAAGCAACAGGGAAGTCCCGTGGATATGGTTTCATTACTTACAAGCACATGGAGTCAACTAAAGCTGCTTTAAAAGCGCCTAGCAAAATAATTGAGGGTCGCATGGCTGTCTGCAATCTGGCATGTGAGGGTCTAAGTGGATCAAGTACAACTCCAGATTTAGCTCAGAGAAAGCTGTACATTGGTGGTTTATCACCAGATATTACAAGTGAAGTATTGCTGAATTTCTTTGGAAGGTATGGTGACATAGAAGAAGGTTCAGTTGCCTATGATAAGGATACAAATGAATCACGAGGGTTTGGATTTGTTACCTATACCACCGCAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGGAAGGAACATCATTGTGAAGCTTGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTATCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGCGGTGTTGCCCCTGTTGGCTATGCTTATCCTCAAGCTCTTGGATCATATCCTGCTTCGTATCCCAGTCCTACGACAGCGCATGCTTCATATGCAAGCCAACCCCAAATGCCATATCCCCATCAAGTGATTGGAAAGAAAGATGCTACTGGACTTCATCCCATCACACCTGCTGGAATGGGAGGCTATCCATATTATATGGCGAAACAATAG

Coding sequence (CDS)

ATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAGACCGTCGGCAATGCCGAATTTTCTTCTCTCGAACATTTGCGAACTCTCCTCGAACCACTTCCCAAGCCTCAACTCGTCGATCTCCTTGCCAGACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAACCGAAAGCTTTTTGTTCGTGGCTTGGCTTGGAATACCACTTCAGAAACATTGTGTGCTGCATTTAGCGTGCATGGGGAAATTGAAGAAGGAGCTGTTATCTATGACAAAGCAACAGGGAAGTCCCGTGGATATGGTTTCATTACTTACAAGCACATGGAGTCAACTAAAGCTGCTTTAAAAGCGCCTAGCAAAATAATTGAGGGTCGCATGGCTGTCTGCAATCTGGCATGTGAGGGTCTAAGTGGATCAAGTACAACTCCAGATTTAGCTCAGAGAAAGCTGTACATTGGTGGTTTATCACCAGATATTACAAGTGAAGTATTGCTGAATTTCTTTGGAAGGTATGGTGACATAGAAGAAGGTTCAGTTGCCTATGATAAGGATACAAATGAATCACGAGGGTTTGGATTTGTTACCTATACCACCGCAGAGGCTGCAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGGAAGGAACATCATTGTGAAGCTTGCAGATTCACACAGGAACAAGATGATGCAGGCACAAGTATCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCCGCTGGATATCCTCAACCTGGGAAACCTCATGGCGGTGTTGCCCCTGTTGGCTATGCTTATCCTCAAGCTCTTGGATCATATCCTGCTTCGTATCCCAGTCCTACGACAGCGCATGCTTCATATGCAAGCCAACCCCAAATGCCATATCCCCATCAAGTGATTGGAAAGAAAGATGCTACTGGACTTCATCCCATCACACCTGCTGGAATGGGAGGCTATCCATATTATATGGCGAAACAATAG

Protein sequence

MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQPQMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ*

Homology

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BLAST of CsaV3_3G038940 vs. NCBI nr
Match: XP_004136575.1 (UBP1-associated protein 2C [Cucumis sativus] >KGN59314.1 hypothetical protein Csa_002522 [Cucumis sativus])

HSP 1 Score: 672.5 bits (1734), Expect = 1.8e-189
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 335

[Close]

BLAST of CsaV3_3G038940 vs. NCBI nr
Match: XP_008443071.1 (PREDICTED: UBP1-associated protein 2C-like [Cucumis melo] >KAA0043722.1 UBP1-associated protein 2C-like [Cucumis melo var. makuwa] >TYK25411.1 UBP1-associated protein 2C-like [Cucumis melo var. makuwa])

HSP 1 Score: 665.2 bits (1715), Expect = 2.9e-187
Identity = 329/335 (98.21%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEETVGN EFSS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQ+IGKKDATGLHP+TPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQLIGKKDATGLHPVTPAGMGGYPYYMAKQ 335

[Close]

BLAST of CsaV3_3G038940 vs. NCBI nr
Match: XP_038904904.1 (UBP1-associated protein 2C-like [Benincasa hispida])

HSP 1 Score: 635.2 bits (1637), Expect = 3.2e-178
Identity = 315/336 (93.75%), Postives = 324/336 (96.43%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEET+GN EFSS+EHLR+LLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETIGNGEFSSVEHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHM+STK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMDSTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMA+CNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAICNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGY-PQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQ 300
           AQVS AIPSMPYPVAAGY PQPGKPHGGV P+GYAYPQAL SYPASYPSPT AH SY SQ
Sbjct: 241 AQVSSAIPSMPYPVAAGYHPQPGKPHGGVGPLGYAYPQALASYPASYPSPTAAHTSYGSQ 300

Query: 301 PQMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
            Q+PYPHQVIGKKDA GLHPITPAGMGGYPY MAKQ
Sbjct: 301 LQLPYPHQVIGKKDAAGLHPITPAGMGGYPYCMAKQ 336

[Close]

BLAST of CsaV3_3G038940 vs. NCBI nr
Match: XP_038906210.1 (UBP1-associated protein 2C-like [Benincasa hispida])

HSP 1 Score: 630.9 bits (1626), Expect = 6.1e-177
Identity = 314/335 (93.73%), Postives = 322/335 (96.12%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKR   + V N EFSS++HLR+LLEPLPKPQLVDLLA+LGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRSWRKPVRNGEFSSVQHLRSLLEPLPKPQLVDLLAKLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHM+STK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMDSTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AAL+APSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALRAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEILLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300
           AQVS AIPSMPYPVAAGYPQPGKPHG V PVGYAYPQAL SYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSSAIPSMPYPVAAGYPQPGKPHGSVVPVGYAYPQALASYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDA GLHPITP GMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDAAGLHPITP-GMGGYPYYMAKQ 334

[Close]

BLAST of CsaV3_3G038940 vs. NCBI nr
Match: XP_023526302.1 (UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 629.4 bits (1622), Expect = 1.8e-176
Identity = 317/337 (94.07%), Postives = 322/337 (95.55%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEETVGN EFSS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCA FSVHGEIEEGAVIYDK TGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALGSYPASYPSPTTAHASYAS 300
           AQV PAIPSMPYPV AAGYPQPGKPHGGV PVGYAY PQAL SY ASYPSPT+AHASYAS
Sbjct: 241 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVTPVGYAYPPQALASYHASYPSPTSAHASYAS 300

Query: 301 QPQMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QPQMP+PHQVIGKKD  GLH  TPAGMGGYPYYMAKQ
Sbjct: 301 QPQMPHPHQVIGKKDTPGLHLTTPAGMGGYPYYMAKQ 337

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy Swiss-Prot
Match: Q9LKA4 (UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.9e-46
Identity = 123/343 (35.86%), Postives = 182/343 (53.06%), Query Frame = 0


Query: 1   MEDLKKRKLEE-----------TVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPS 60
           M+ +KKRKL+E           T+G    S  +  R ++E     QL+DLL     ++P 
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSP-QDARKIIERFTTDQLLDLLQEAIVRHPD 60

Query: 61  IAEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYG 120
           + E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYG
Sbjct: 61  VLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYG 120

Query: 121 FITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDIT 180
           F+T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ 
Sbjct: 121 FVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMP 180

Query: 181 SEVLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIV 240
           ++ LLN F  YGD+EEG + +DK T +SRGF    Y TAE A+ A+ DP K   G+++  
Sbjct: 181 ADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNC 240

Query: 241 KLA----DSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPA 300
           KLA       +  M QAQ   +     +    G  +P  P+G    +  AY    G  PA
Sbjct: 241 KLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPA 300

Query: 301 SYPSPTTAHASYASQPQMPYPHQVIGKKDATGLHPITPAGMGG 328
            + + T +     S     + +   G    TG++     G GG
Sbjct: 301 HHMNSTHSSMGVGSAGYGGH-YGGYGGPGGTGVYGGLGGGYGG 340

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy Swiss-Prot
Match: O80678 (UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.8e-42
Identity = 93/237 (39.24%), Postives = 134/237 (56.54%), Query Frame = 0


Query: 14  GNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEVLLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y + E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy Swiss-Prot
Match: Q9LES2 (UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.0e-41
Identity = 101/294 (34.35%), Postives = 148/294 (50.34%), Query Frame = 0


Query: 14  GNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN E    E ++ LLEP  K Q++ LL     ++  +A  I+ VA  DPV+RK+FV GL 
Sbjct: 89  GNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLG 148

Query: 74  WNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGR 133
           W+T +ETL  AF  +GEIE+   ++DK +GKS+GYGFI YK     + ALK P K I  R
Sbjct: 149 WDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSR 208

Query: 134 MAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRY 193
           M  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF ++
Sbjct: 209 MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKF 268

Query: 194 GDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNI-IVKLADSHR-NK 253
           G+IEEG +  DK T   +GF    Y ++E+AK+A+++P KTF G  +   K  D  +  K
Sbjct: 269 GEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPGK 328

Query: 254 MMQAQVSPAIPSMPY-----------PVAAGYPQPGKPHGGVAPVGYAYPQALG 281
             Q   +P   + P            P   G+   G P G   P       A+G
Sbjct: 329 QQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGHLMAGNPAGMGGPTAQVINPAIG 382

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy Swiss-Prot
Match: Q9LJ04 (RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 86/222 (38.74%), Postives = 121/222 (54.50%), Query Frame = 0


Query: 22  EHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETL 81
           + ++ LL   PK QLV+LL+     +  +   +   A ADP  RK+FV GL W+ T+ETL
Sbjct: 113 DSIQALLNSFPKDQLVELLSAAALSHEDVLTAVHRAADADPALRKIFVHGLGWDATAETL 172

Query: 82  CAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLAC 141
             AFS +GEIE+  V+ D+ATGK +GYGFI +      +AAL+ P K I  R   C LA 
Sbjct: 173 TEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSRRSGARAALREPQKKIGNRTTACQLAS 232

Query: 142 EG---LSGSSTTP-----------------DLAQRKLYIGGLSPDITSEVLLNFFGRYGD 201
            G     G +T P                 +  QRK+++  +  DI  + LL FF +YG+
Sbjct: 233 VGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQRKIFVSNVGADIDPQKLLQFFSKYGE 292

Query: 202 IEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGG 224
           IEEG +  DK T + +GF    Y T ++AKKA+ +P K F G
Sbjct: 293 IEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQEPHKQFEG 334

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy Swiss-Prot
Match: Q9SHZ6 (UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-23
Identity = 60/131 (45.80%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 22  EHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETL 81
           E LR LL+P  K QLVDL+        SI   +   A  D  +RK+FV GL W TT ETL
Sbjct: 61  EELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETL 120

Query: 82  CAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLAC 141
              F  +GEIEE  V+ DKATGK++G+GF+ +K  +  K ALK P K I  R A C LA 
Sbjct: 121 VGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLAS 180

Query: 142 EGLSGSSTTPD 153
            G + S    D
Sbjct: 181 MGPAASGKGHD 191

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy TrEMBL
Match: A0A0A0LEH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809410 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 8.9e-190
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 335

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy TrEMBL
Match: A0A5A7TKB5 (UBP1-associated protein 2C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005530 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.4e-187
Identity = 329/335 (98.21%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEETVGN EFSS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQ+IGKKDATGLHP+TPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQLIGKKDATGLHPVTPAGMGGYPYYMAKQ 335

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy TrEMBL
Match: A0A1S3B7X8 (UBP1-associated protein 2C-like OS=Cucumis melo OX=3656 GN=LOC103486777 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.4e-187
Identity = 329/335 (98.21%), Postives = 333/335 (99.40%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEETVGN EFSS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300
           AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP
Sbjct: 241 AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP 300

Query: 301 QMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QMPYPHQ+IGKKDATGLHP+TPAGMGGYPYYMAKQ
Sbjct: 301 QMPYPHQLIGKKDATGLHPVTPAGMGGYPYYMAKQ 335

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy TrEMBL
Match: A0A6J1F6L7 (UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111441349 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 3.3e-176
Identity = 317/337 (94.07%), Postives = 323/337 (95.85%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLEETVGN EFSS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 6   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 65

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCA FSVHGEIEEGAVIYDK TGKSRGYGFITYKHMESTK
Sbjct: 66  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 125

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 126 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 185

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 186 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 245

Query: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALGSYPASYPSPTTAHASYAS 300
           AQV PAIPSMPYPV AAGYPQPGKPHGGVAPVGYAY PQAL SY ASYPS T+AHASYAS
Sbjct: 246 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTSAHASYAS 305

Query: 301 QPQMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
           QPQ+P+PHQVIGKKDA GLH ITP GMGGYPYYMAKQ
Sbjct: 306 QPQIPHPHQVIGKKDAPGLHLITPTGMGGYPYYMAKQ 342

[Close]

BLAST of CsaV3_3G038940 vs. ExPASy TrEMBL
Match: A0A6J1J4I3 (UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111481690 PE=4 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.6e-175
Identity = 316/337 (93.77%), Postives = 321/337 (95.25%), Query Frame = 0


Query: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60
           MEDLKKRKLE TVGN EFSS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEATVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120
           DPVNRKLFVRGLAWNTTSETLCA FSVHGEIEEGAVIYDK TGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 120

Query: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 180

Query: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240
           DIEEGSVAYDKDTNESRGFGFVTYTT EA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALGSYPASYPSPTTAHASYAS 300
           AQV PAIPSMPYPV AAGYPQPGKPHGGVAPVGYAY PQAL SY ASYPSPT+AHASYAS
Sbjct: 241 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSPTSAHASYAS 300

Query: 301 QPQMPYPHQVIGKKDATGLHPITPAGMGGYPYYMAKQ 336
            PQMP+PHQVIGKKDA GLH  TPAGMG YPYYMAKQ
Sbjct: 301 LPQMPHPHQVIGKKDAPGLHLTTPAGMGCYPYYMAKQ 337

[Close]

BLAST of CsaV3_3G038940 vs. TAIR 10
Match: AT3G15010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 185.7 bits (470), Expect = 6.3e-47
Identity = 123/343 (35.86%), Postives = 182/343 (53.06%), Query Frame = 0


Query: 1   MEDLKKRKLEE-----------TVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPS 60
           M+ +KKRKL+E           T+G    S  +  R ++E     QL+DLL     ++P 
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSP-QDARKIIERFTTDQLLDLLQEAIVRHPD 60

Query: 61  IAEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYG 120
           + E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYG
Sbjct: 61  VLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYG 120

Query: 121 FITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDIT 180
           F+T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ 
Sbjct: 121 FVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMP 180

Query: 181 SEVLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIV 240
           ++ LLN F  YGD+EEG + +DK T +SRGF    Y TAE A+ A+ DP K   G+++  
Sbjct: 181 ADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNC 240

Query: 241 KLA----DSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPA 300
           KLA       +  M QAQ   +     +    G  +P  P+G    +  AY    G  PA
Sbjct: 241 KLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPA 300

Query: 301 SYPSPTTAHASYASQPQMPYPHQVIGKKDATGLHPITPAGMGG 328
            + + T +     S     + +   G    TG++     G GG
Sbjct: 301 HHMNSTHSSMGVGSAGYGGH-YGGYGGPGGTGVYGGLGGGYGG 340

[Close]

BLAST of CsaV3_3G038940 vs. TAIR 10
Match: AT3G15010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 185.7 bits (470), Expect = 6.3e-47
Identity = 123/343 (35.86%), Postives = 182/343 (53.06%), Query Frame = 0


Query: 1   MEDLKKRKLEE-----------TVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPS 60
           M+ +KKRKL+E           T+G    S  +  R ++E     QL+DLL     ++P 
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSP-QDARKIIERFTTDQLLDLLQEAIVRHPD 60

Query: 61  IAEEIKSVASADPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYG 120
           + E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYG
Sbjct: 61  VLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYG 120

Query: 121 FITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDIT 180
           F+T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ 
Sbjct: 121 FVTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMP 180

Query: 181 SEVLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIV 240
           ++ LLN F  YGD+EEG + +DK T +SRGF    Y TAE A+ A+ DP K   G+++  
Sbjct: 181 ADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNC 240

Query: 241 KLA----DSHRNKMMQAQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPA 300
           KLA       +  M QAQ   +     +    G  +P  P+G    +  AY    G  PA
Sbjct: 241 KLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGMVRPAGPYGAAGGIS-AYGGYSGGPPA 300

Query: 301 SYPSPTTAHASYASQPQMPYPHQVIGKKDATGLHPITPAGMGG 328
            + + T +     S     + +   G    TG++     G GG
Sbjct: 301 HHMNSTHSSMGVGSAGYGGH-YGGYGGPGGTGVYGGLGGGYGG 340

[Close]

BLAST of CsaV3_3G038940 vs. TAIR 10
Match: AT2G41060.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 172.6 bits (436), Expect = 5.5e-43
Identity = 93/237 (39.24%), Postives = 134/237 (56.54%), Query Frame = 0


Query: 14  GNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEVLLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y + E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of CsaV3_3G038940 vs. TAIR 10
Match: AT2G41060.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 172.6 bits (436), Expect = 5.5e-43
Identity = 93/237 (39.24%), Postives = 134/237 (56.54%), Query Frame = 0


Query: 14  GNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 74  WNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGR 133
           W+T +++L  AF  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 134 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEVLLNFFGRYGDIEEG 193
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 194 SVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 243
            +  DK T   +GF    Y + E+AKKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of CsaV3_3G038940 vs. TAIR 10
Match: AT3G56860.3 (UBP1-associated protein 2A )

HSP 1 Score: 169.9 bits (429), Expect = 3.6e-42
Identity = 101/294 (34.35%), Postives = 148/294 (50.34%), Query Frame = 0


Query: 14  GNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 73
           GN E    E ++ LLEP  K Q++ LL     ++  +A  I+ VA  DPV+RK+FV GL 
Sbjct: 89  GNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLG 148

Query: 74  WNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTKAALKAPSKIIEGR 133
           W+T +ETL  AF  +GEIE+   ++DK +GKS+GYGFI YK     + ALK P K I  R
Sbjct: 149 WDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSR 208

Query: 134 MAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRY 193
           M  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF ++
Sbjct: 209 MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKF 268

Query: 194 GDIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNI-IVKLADSHR-NK 253
           G+IEEG +  DK T   +GF    Y ++E+AK+A+++P KTF G  +   K  D  +  K
Sbjct: 269 GEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKPGK 328

Query: 254 MMQAQVSPAIPSMPY-----------PVAAGYPQPGKPHGGVAPVGYAYPQALG 281
             Q   +P   + P            P   G+   G P G   P       A+G
Sbjct: 329 QQQHHHNPHAYNNPRYQRNDNNGYGPPGGHGHLMAGNPAGMGGPTAQVINPAIG 382

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136575.1	1.8e-189	100.00	UBP1-associated protein 2C [Cucumis sativus] >KGN59314.1 hypothetical protein Cs...	[more]
XP_008443071.1	2.9e-187	98.21	PREDICTED: UBP1-associated protein 2C-like [Cucumis melo] >KAA0043722.1 UBP1-ass...	[more]
XP_038904904.1	3.2e-178	93.75	UBP1-associated protein 2C-like [Benincasa hispida]	[more]
XP_038906210.1	6.1e-177	93.73	UBP1-associated protein 2C-like [Benincasa hispida]	[more]
XP_023526302.1	1.8e-176	94.07	UBP1-associated protein 2C-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G038940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA4	8.9e-46	35.86	UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1	[more]
O80678	7.8e-42	39.24	UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1	[more]
Q9LES2	5.0e-41	34.35	UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1	[more]
Q9LJ04	2.1e-39	38.74	RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=...	[more]
Q9SHZ6	3.6e-23	45.80	UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2	[more]

BLAST of CsaV3_3G038940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEH0	8.9e-190	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809410 PE=4 SV=1	[more]
A0A5A7TKB5	1.4e-187	98.21	UBP1-associated protein 2C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B7X8	1.4e-187	98.21	UBP1-associated protein 2C-like OS=Cucumis melo OX=3656 GN=LOC103486777 PE=4 SV=...	[more]
A0A6J1F6L7	3.3e-176	94.07	UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111441349 PE...	[more]
A0A6J1J4I3	3.6e-175	93.77	UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111481690 PE=4...	[more]

BLAST of CsaV3_3G038940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15010.1	6.3e-47	35.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G15010.2	6.3e-47	35.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.1	5.5e-43	39.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.2	5.5e-43	39.24	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	3.6e-42	34.35	UBP1-associated protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 66..138 e-value: 7.3E-19 score: 78.7 coord: 157..229 e-value: 3.4E-24 score: 96.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 158..226 e-value: 1.2E-16 score: 60.2 coord: 67..133 e-value: 5.1E-13 score: 48.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 156..233 score: 17.318792
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 65..156 score: 13.720102
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 45..147 e-value: 1.9E-20 score: 75.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 148..246 e-value: 2.8E-24 score: 87.7
None	No IPR available	PANTHER	PTHR48027:SF13	UBP1-ASSOCIATED PROTEIN 2C-LIKE	coord: 15..335
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 15..335
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 65..140 e-value: 8.82151E-35 score: 120.027
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 53..142
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 154..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038940.1	CsaV3_3G038940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding