CsaV3_3G038890 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038890
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger CCCH domain-containing protein 14-like
Location	chr3: 31974938 .. 31978308 (-)
RNA-Seq Expression	CsaV3_3G038890
Synteny	CsaV3_3G038890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTAAACCAATATATTTACCTTTTAATCATTTACGTAATCACTGATTTCCTTAAATAAAAAAGTAAAACGATAAATTTCAATATCAACTTTGCTGTCTATTTTTTCCCACCGAAAGAGTTCTCATCCTTTCACTCACTTTCATATTTGCAAAACCCTTCCCTCTCTTTTAGGGTTGGAGTTAGGGTTTTCGATTCATTCTTTTTTTTTTTTTTTTTTTTTTTTTGTAGCATTTAGAATTTTTAATCTTATCGTTTTAGACGTATTCTTTTCGAGTTCTTTAGTTTGTTGTGGATCTCGATCTGGGTTTATTACCAATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGGTTTCTTCCTCCTTCCCTTCCTTCTTTTACTTCTCAATTTCACTACTTTTTTAAACTTCTTGAGCTCTACTGTATGTATTACTTTGTCCTGTTTCTGTCCAGATTTTTGTATCAACTATAGGTTCGTAGTTCAATGTTAAGCAATCGATGGCGGTCATTCTATTTCGTTTACTTTTGTTATTTTTGGTGGTGGGGTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGTGCGGTTTCTGAATTCGGATTTAGAATTACAGATTTGTGGGTTTGAGTTTGCTGAAACTTTGCTTGTGAACTTCCTACGTGGGAAAGATTTAAGAAGCTATAAAGGGTTTAAACTATTTTGTGATGCCAGCTAAAGAATAAAAAACTTTGTGAAAGGTCAAAGATACTGTTCTAACAAATAGGATAATTTGTTAAAGAAACTAATGAGTATTGATTGATAATTGATCATAATATGACTTTTTGAACAATTTCAAACATTTAGGTGCATAAATTGTTGGTTTTCCCATAAATTTGTTAACTGCAGGAGGTACTATAACTGTGAAAGCCACCCCACCTAATTGAGACCACCTGAATATACATACAGAGACATTAAAATCTTATACGGGCATATTAAATCTTAAGTTATTTGTTGGTTAGCAGTTCATAAACTCTCAGGCATTTTAGAGTAATTACATTAAACTCTAGGAAAATTGACTAAGAAAACAATAATAAATTTTTTGTAACAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGGTTCAAATCTTCACTCATCTAAATAAATACATAGAAACTTATCCTTTTCTGAATCTTTATAAATTATTGTAAGAATCTAATTTTCTGAATCTCTATAATTTTGCTCATGAAAGAGACAAATTGCATACGTGTAAAATCTATTTATTGTCTAACTATATAAATATCTCTTTAAGTATAAAAGACTTAACCACTATTTAGAGTGTAACTTCTATGGAGATCAACAGTGATACTTATTCCTGTGAAAAGGAAAATTGAACTGGGAAGTGGTGATATTTTCTCCAGCTTATACTGATCATTACGATTTTTCTCTAAAATCTTTCTGGCAAGTCTATGTCTTGTTAATAGATGTCACAAATACTTGGTTCGCAGGGTTTCTTTTTACGTGATTTTTTTTGTGTCAAGTGTTATTTATGGGTAGTGCTCGTTAATTACTCAAACACTGTCCTTATTGGCACTTTACAGAGGATGCCTTTGAACTGTACATTCTGAAAGTGCTTTAATGTACTTGTTTGTGTATGAATCTTCTCAAATTTATTGGAACCATTTTTTACAGACTCTGTGAGATATATAATGAATATTCTTCTCTCTTATCTAAATTATTCTTGGTGAACCCTACTTTTGATATTTCAGAATCTCTGTTTGCAAATTCTTTTCTGCTGCTCATAAGGTTGTGAATTAGCACCTCCATTACAGCCTTACCTGAATAGGATTTACTCGACATGTTTTATAACTGTCTTTTGAGTTATTTTTCACTGAATCAAGCTGCTGCAATTTCAGGATCTCCATTATATGTTTTATTTTTCTCCCTATTTATGCTATCTTTCACCAATGAGTGGAGGAATAATAAAATATCAACATTTATTTTCCGTTGCTTATGATTTTGAATATCATTTTTGTTTCTTTTGCAAAATACCGAGCATAATTATTTTAAATCTGAATCTAAACAATGGAAGTGTGTCTGATATTCATCTTTTTGTGCAATTGATGTCAAAAGCTTTCAATTTGTCATGCATATGAAATGAGTTCGTCTTACATATGTGGAGAATATCGGTAGACTGATTGTTTCTATTTTGTTTTCAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCGGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCCATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATTGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCCGCCGAATTGCGCAAATCTGGCGTGTGAAGAAATCCGTTTTTCTTATTTTCTCTTTTTACCCCCAAATTTAGTGTTGTAGCGTAAGCCTTTGGTTCAGTTATTTGTATTAGATAAAGGTATCTATCTTGAATTATGGATGAACAGGGCAATGCAACTCAGTGGAAATTGACAGTTTTTATTATGGTTAAGAGAAAGTCAAAATTACAGTTTTGAAGACCCCATTCCTATCCAATATTCGTTTCATTCTCATTCTCCCTATACCCTATTTTACTTGCATGCTTCCATTTAGACATTTTGGACCTATTTTCATTTTTTAATATAAGCCATTTGGTAAAAGGGGAGTTCAATATTGGCAACTCAAAATATGCCTTCCCATCAA

mRNA sequence

ATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCGGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCCATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATTGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCCGCCGAATTGCGCAAATCTGGCGTGTGA

Coding sequence (CDS)

ATGGATACGCGCAAGAGAGGAAGGGCCGAGGTTGGATTAAAGGCTAATGGCGGCTTGAAGAAAAATAAGCAAGACATGGAGTACTTATCAACTGGTGTAGCAAGCAAATCGAAGCCATGCACCAAATTTTACAGCACTACTGGCTGCCCATTTGGTGAAGCATGTCATTTCCTGCATTATGTCCCGGGCGGTTATAACGCGGTTGCGCAAATGATGAACCTACCACCTGCTCCTCCAGCACCTAGAAATATGGGGGCACCCCCTCCTCCAATGTCCAATGGCTCAGCCACCCAGGCTGTTAAAAGTCGTATGTGCAACAAGTATAACTCTGCTGAAGGCTGCAAATTTGGCGACAAGTGCCATTTTGCTCACGCAGAATGGGAACTTGGAAAGCCTTCAGCTCCATCTCACGACGATCCTCGGTCCATGGGACATATTCCAAACCGTTTAGCCAGTAGGATGGATGCAGGTCCACCAGGCCTTGCAGCCAGCTTTGGTGCCTCTTCCACGGCAAAAATTAGTGTAGATGCTTCCCTGGCTGGAGCCATTATAGGGAAGGGTGGCATTAATTCCAAGCAGATTTGTCGTCGAACAGGAGCCAAACTTTCCATTAGGGACCATGAATCAGATCCCAACCTCAGGAATATTGAACTCGAGGGATCGTTCGACCAGATTAAGGAAGCAAGCGCAATGGTGCAGGAGCTTATCGTGACAGTTTCGATGGCAGGACCTCCAAAATCGGCTACTGGAGCAACAGGCGGTACGGCTGGTCCCGCAGGTAACAATTTTAAAACAAAACTTTGTGATAATTTTGCAAAAGGATCTTGCACGTTTGGAGAGAGATGTCATTTTGCACACGGTGCCGCCGAATTGCGCAAATCTGGCGTGTGA

Protein sequence

MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV*

Homology

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BLAST of CsaV3_3G038890 vs. NCBI nr
Match: XP_004136573.1 (zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN59309.1 hypothetical protein Csa_000911 [Cucumis sativus])

HSP 1 Score: 597.0 bits (1538), Expect = 8.6e-167
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296

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BLAST of CsaV3_3G038890 vs. NCBI nr
Match: XP_008443064.1 (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 569.7 bits (1467), Expect = 1.5e-158
Identity = 283/296 (95.61%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGGLKK+KQ+MEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGA PPPMSNGSATQ VKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGA-PPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRS+GHIPNRLA+RMDA PP LAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELI+TVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSA GATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG+
Sbjct: 241 MAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGM 295

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BLAST of CsaV3_3G038890 vs. NCBI nr
Match: XP_038906130.1 (zinc finger CCCH domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 549.7 bits (1415), Expect = 1.6e-152
Identity = 271/295 (91.86%), Postives = 284/295 (96.27%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR+E+GL ANGGLKK+KQ+ME LSTGV SKSKPCTKFYSTTGCPFGE CHFLHY
Sbjct: 1   MDTRKRGRSEIGLNANGGLKKSKQEMENLSTGVPSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPR+MGA PPPMSNGSATQ VKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRSMGA-PPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH +WELGKP+APSHDDPR+MGHIPNRL+SRMDA PPG AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGDWELGKPTAPSHDDPRAMGHIPNRLSSRMDATPPGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMV+ELIVTVS
Sbjct: 181 GAIIGKGGVNSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVRELIVTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPKSATGATGGTA PAG+NFKTKLCDNFAKGSCTFGERCHFAHGAAELRK G
Sbjct: 241 MAGPPKSATGATGGTAAPAGSNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKCG 294

[Close]

BLAST of CsaV3_3G038890 vs. NCBI nr
Match: XP_023526424.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 505.8 bits (1301), Expect = 2.6e-139
Identity = 250/295 (84.75%), Postives = 270/295 (91.53%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MD RKRG+ EVGL ANGG KK+KQ+MEYLSTGVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDYRKRGKPEVGLNANGGFKKSKQEMEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAPPAPR++ A P PMSNGS TQ VK+RMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAA-PHPMSNGSTTQDVKTRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELG+PSAPSH+DPR+ G+ P+RL SRM A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMSAAPAGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELI TVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPK+AT ATGG A PAG+N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 MAGPPKAATRATGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 294

[Close]

BLAST of CsaV3_3G038890 vs. NCBI nr
Match: XP_022158356.1 (zinc finger CCCH domain-containing protein 14-like [Momordica charantia])

HSP 1 Score: 505.4 bits (1300), Expect = 3.4e-139
Identity = 255/295 (86.44%), Postives = 266/295 (90.17%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGG K +KQ+ME LSTGV SKSKPCTKFYSTTGCPFGE CHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGFKMSKQEMESLSTGVGSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYN VAQMMNL P PPA RNM A PPPMSNGSA   VK+RMCNKYNSAEGCKFG+KC
Sbjct: 61  VPGGYNTVAQMMNLTPIPPAARNMAA-PPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELGKP APSHDD R+MGHIPNRL SRM+A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIVTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCHFAHGAAELRKSG
Sbjct: 241 MAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 290

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.9e-88
Identity = 186/305 (60.98%), Postives = 214/305 (70.16%), Query Frame = 0


Query: 4   RKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPG 63
           RKRG+ +    ANG   K  ++ E   TGV SKSKPCTKF+ST+GCPFGE CHFLH+ PG
Sbjct: 6   RKRGKPD---GANGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNAVAQMMNL--PPAPPAPRNMGAPPPPMSN----GSATQAVKSRMCNKYNSAEGCKFG 123
           GY AVA+M NL  P   P P  M     PM N    G  T  VK+R+CNKYN+AEGCK+G
Sbjct: 66  GYQAVAKMTNLGGPAIAPPPGRM-----PMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWG 125

Query: 124 DKCHFAHAEWELGKP-----SAPSHDDPRSMGHI-PNRLASRMDAGPPGLAASFGASSTA 183
           DKCHFAH E ELGKP     S P    PR  GH  P  + S   + P    ASFGAS+TA
Sbjct: 126 DKCHFAHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSPAMSTP----ASFGASATA 185

Query: 184 KISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAM 243
           KISVDASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+NIELEG+FDQIK ASAM
Sbjct: 186 KISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAM 245

Query: 244 VQELIVTVSMAGPP--KSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAA 295
           V+ELIV++    PP  K   G +    GP G+NFKTKLC+NF KGSCTFG+RCHFAHG  
Sbjct: 246 VRELIVSIGGGAPPQGKKPVGGSHRGGGP-GSNFKTKLCENFTKGSCTFGDRCHFAHGEN 297

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-85
Identity = 178/305 (58.36%), Postives = 209/305 (68.52%), Query Frame = 0


Query: 4   RKRGRAEVGLKANGGLK--KNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYV 63
           RKR R +    ANGG    K  ++ E   TG++SK KPCTKF+ST GCPFGE CHF H+V
Sbjct: 8   RKRSRPDT---ANGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFV 67

Query: 64  PGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 123
           PGGY AVA+ +NL  PA PAP           N     + K+RMC KYN+AEGCKFGDKC
Sbjct: 68  PGGYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKC 127

Query: 124 HFAHAEWELGKPSAPSHDDPRS--MGHIPNRLASRMDAGPPGL----AASFGASSTAKIS 183
           HFAH E ELGKP+  SH+   +  MG    R   R +  PP      A +FGAS+TAKIS
Sbjct: 128 HFAHGERELGKPAYMSHESAMAPPMG---GRYGGRPEPPPPAAMGPPAGNFGASATAKIS 187

Query: 184 VDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQE 243
           VDASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+NIELEG+FDQIK+AS MV E
Sbjct: 188 VDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGE 247

Query: 244 LIVTVSMAGPPKSATGATGGTA-----GPAG-NNFKTKLCDNFAKGSCTFGERCHFAHGA 294
           LI T+S + P K   G+  G A     GP G +N+KTKLC+NF KG+CTFG+RCHFAHG 
Sbjct: 248 LIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGE 306

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.9e-82
Identity = 168/286 (58.74%), Postives = 196/286 (68.53%), Query Frame = 0


Query: 14  KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMN 73
           +   G  K  +  E    GV SK KPCTKF+ST+GCPFG +CHFLH  PGGY A A+M +
Sbjct: 12  EGTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTS 71

Query: 74  ----LPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWEL 133
                  APP    +G   P   NG  T +VK+RMCNKYN+AEGCK+G KCHFAH E EL
Sbjct: 72  HGGTAVAAPPGRMPLG---PGAPNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGEREL 131

Query: 134 GKPSAPSHDDPRSMGHIPNRLASR--MDAGPPGLAASFGASSTAKISVDASLAGAIIGKG 193
           GKP    +  P  MG +P         D  PP   ++FGAS+TAKISVDASLAG IIGKG
Sbjct: 132 GKPMLLDNSMPHPMGSMPFEAPPMPGPDIVPP---STFGASATAKISVDASLAGGIIGKG 191

Query: 194 GINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKS 253
           G N+K I R TGAKL+IRD+ES+PNL+NIELEG+FDQIK ASAMV ELIV +S   PP  
Sbjct: 192 GTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAK 251

Query: 254 ATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRK 294
             G  G  AG  G+NFKTKLC+NF KGSCTFG+RCHFAHG +ELRK
Sbjct: 252 NPG-RGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.6e-70
Identity = 156/305 (51.15%), Postives = 188/305 (61.64%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MDTRKRGR E G      GG KK+KQ+ME  STG+ SKSKPCTKF+ST+GCPFGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNAV+QM N+ PP P   RNM                         S  G    
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM-----------------------QGSGNG---- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                          R + R ++G PG  ++FG S+TA+ SVDA
Sbjct: 121 ------------------------------GRFSGRGESG-PGHVSNFGDSATARFSVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGG++SKQICR+TG KLSI+DHE DPNL+NI LEG+ +QI EASAMV++LI 
Sbjct: 181 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 240

Query: 241 TVSMAG--PPKSATGATGGTAGPA----GNNFKTKLCDNFAKGSCTFGERCHFAHGAAEL 297
            ++ A   PP    G  GG         G+NFKTK+C+ F+KG+CTFG+RCHFAHG AEL
Sbjct: 241 RLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAEL 247

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-66
Identity = 149/299 (49.83%), Postives = 181/299 (60.54%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MD RKRGR E      +NGG K++KQ+ME +STG+ SKSKPCTKF+ST+GCPFG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNA AQM NL PP     RNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                  +  G    R + R D G  G  + FGA ST+KISVDA
Sbjct: 121 -----------------------QGSGGPGGRFSGRGDPG-SGPVSIFGA-STSKISVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGGI+SKQICR TGAKLSI+DHE DPNL+ IELEG+F+QI  AS MV+ELI 
Sbjct: 181 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 241 TVSMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
            +     P+   G  G      G+N+KTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 RLGSVKKPQGIGGPEG--KPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy TrEMBL
Match: A0A0A0LEG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.2e-167
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 296

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy TrEMBL
Match: A0A1S3B785 (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103486772 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.1e-159
Identity = 283/296 (95.61%), Postives = 289/296 (97.64%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGGLKK+KQ+MEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGLKKSKQEMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNLPPAPPAPRNMGA PPPMSNGSATQ VKSRMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLPPAPPAPRNMGA-PPPMSNGSATQVVKSRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAHAEWELGKPSAPSHDDPRS+GHIPNRLA+RMDA PP LAASFGASSTAKISVDASLA
Sbjct: 121 HFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFGASSTAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELI+TVS
Sbjct: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELILTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
           MAGPPKSA GATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG+
Sbjct: 241 MAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGM 295

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy TrEMBL
Match: A0A6J1E0P5 (zinc finger CCCH domain-containing protein 14-like OS=Momordica charantia OX=3673 GN=LOC111024859 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.7e-139
Identity = 255/295 (86.44%), Postives = 266/295 (90.17%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MDTRKRGR EVGL ANGG K +KQ+ME LSTGV SKSKPCTKFYSTTGCPFGE CHFLHY
Sbjct: 1   MDTRKRGRPEVGLNANGGFKMSKQEMESLSTGVGSKSKPCTKFYSTTGCPFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYN VAQMMNL P PPA RNM A PPPMSNGSA   VK+RMCNKYNSAEGCKFG+KC
Sbjct: 61  VPGGYNTVAQMMNLTPIPPAARNMAA-PPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELGKP APSHDD R+MGHIPNRL SRM+A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELIVTVS
Sbjct: 181 GAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIVTVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCHFAHGAAELRKSG
Sbjct: 241 MAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 290

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy TrEMBL
Match: A0A6J1J4L4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111481711 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.0e-136
Identity = 244/295 (82.71%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MD RKRG++EVGL AN G KK+KQ++EYLSTGVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDYRKRGKSEVGLNANAGFKKSKQELEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAPPAPR++ A P P+SNGS TQ  K+RMCNKYNSAEGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLEPAPPAPRSIAA-PHPLSNGSTTQDAKTRMCNKYNSAEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELG+PSAPSH+DPR  G+ P+RL SRM+A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGRPSAPSHEDPRDTGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV++LI TVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRDLIATVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGPPK+AT ATGG A  AG+N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 MAGPPKAATRATGGPAATAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 294

[Close]

BLAST of CsaV3_3G038890 vs. ExPASy TrEMBL
Match: A0A6J1F0S5 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111441341 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.3e-136
Identity = 246/295 (83.39%), Postives = 265/295 (89.83%), Query Frame = 0


Query: 1   MDTRKRGRAEVGLKANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFLHY 60
           MD RKR + EVGL ANGG KK+KQ+MEYLSTGVASKSKPCTKFYSTTGC FGE CHFLHY
Sbjct: 1   MDYRKREKPEVGLNANGGFKKSKQEMEYLSTGVASKSKPCTKFYSTTGCQFGEGCHFLHY 60

Query: 61  VPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKC 120
           VPGGYNAVAQMMNL PAP APRNM A P PMSNGS TQ  K+RMCNKYNS EGCKFGDKC
Sbjct: 61  VPGGYNAVAQMMNLEPAPSAPRNMAA-PHPMSNGSTTQDAKTRMCNKYNSTEGCKFGDKC 120

Query: 121 HFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDASLA 180
           HFAH EWELG+PSAPSH+DPR+ G+ P+RL SRM+A P G AASFGAS+TAKISVDASLA
Sbjct: 121 HFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAASFGASATAKISVDASLA 180

Query: 181 GAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVS 240
           GAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIKEASAMV+ELI TVS
Sbjct: 181 GAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIATVS 240

Query: 241 MAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 296
           MAGP K+AT  TGG A PAG+N+KTKLCDNF KGSCTFGERCHFAHG+AELRKSG
Sbjct: 241 MAGPSKAATRTTGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHFAHGSAELRKSG 294

[Close]

BLAST of CsaV3_3G038890 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-71
Identity = 156/305 (51.15%), Postives = 188/305 (61.64%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MDTRKRGR E G      GG KK+KQ+ME  STG+ SKSKPCTKF+ST+GCPFGE CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNAV+QM N+ PP P   RNM                         S  G    
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM-----------------------QGSGNG---- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                          R + R ++G PG  ++FG S+TA+ SVDA
Sbjct: 121 ------------------------------GRFSGRGESG-PGHVSNFGDSATARFSVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGG++SKQICR+TG KLSI+DHE DPNL+NI LEG+ +QI EASAMV++LI 
Sbjct: 181 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 240

Query: 241 TVSMAG--PPKSATGATGGTAGPA----GNNFKTKLCDNFAKGSCTFGERCHFAHGAAEL 297
            ++ A   PP    G  GG         G+NFKTK+C+ F+KG+CTFG+RCHFAHG AEL
Sbjct: 241 RLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAEL 247

[Close]

BLAST of CsaV3_3G038890 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 254.2 bits (648), Expect = 1.3e-67
Identity = 149/299 (49.83%), Postives = 181/299 (60.54%), Query Frame = 0


Query: 1   MDTRKRGRAEVGL--KANGGLKKNKQDMEYLSTGVASKSKPCTKFYSTTGCPFGEACHFL 60
           MD RKRGR E      +NGG K++KQ+ME +STG+ SKSKPCTKF+ST+GCPFG+ CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNL-PPAPPAPRNMGAPPPPMSNGSATQAVKSRMCNKYNSAEGCKFG 120
           HYVPGGYNA AQM NL PP     RNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 DKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISVDA 180
                                  +  G    R + R D G  G  + FGA ST+KISVDA
Sbjct: 121 -----------------------QGSGGPGGRFSGRGDPG-SGPVSIFGA-STSKISVDA 180

Query: 181 SLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIKEASAMVQELIV 240
           SLAGAIIGKGGI+SKQICR TGAKLSI+DHE DPNL+ IELEG+F+QI  AS MV+ELI 
Sbjct: 181 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 241 TVSMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297
            +     P+   G  G      G+N+KTK+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 241 RLGSVKKPQGIGGPEG--KPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

[Close]

BLAST of CsaV3_3G038890 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06
Identity = 52/198 (26.26%), Postives = 78/198 (39.39%), Query Frame = 0


Query: 31  TGVASKSKPCTKFYSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPP 90
           +G + K + C KFY+  GCP+GE+C FLH      N  +  ++L P        G     
Sbjct: 169 SGRSFKGRHCKKFYTEEGCPYGESCTFLH-DEASRNRESVAISLGPGGYGSGGGGGSGGG 228

Query: 91  M--SNGSATQAV----------------------KSRMCNKYNSAEGCKFGDKCHFAHAE 150
                GS++  V                      K+R+CNK+     C FG KCHFAH  
Sbjct: 229 SVGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGA 288

Query: 151 WEL-----------GKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAASFGASSTAKISV 194
            EL           GK     + D +     P  L+       PG+  +  AS    +++
Sbjct: 289 AELHRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVAL 348

[Close]

BLAST of CsaV3_3G038890 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 50.1 bits (118), Expect = 3.7e-06
Identity = 39/110 (35.45%), Postives = 52/110 (47.27%), Query Frame = 0


Query: 36  KSKPCTKFYSTTGCPF-GEACHFLHYVPGGYNAVAQMMNLPPAPP---------APRNMG 95
           K+K C KF + T CP+   +CHF H         A+ + LPP PP         A RN  
Sbjct: 73  KTKLCFKFRAGT-CPYSASSCHFAH--------SAEELRLPPPPPPNWQETVTEASRNRE 132

Query: 96  APPPPMS-NGSATQAVKS-----RMCNKYNSAEGCKFGDKCHFAHAEWEL 130
           +    +   G+  Q +KS     R+CNK+ +   C FG  CHFAH   EL
Sbjct: 133 SFAVSLGPRGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSEL 173

[Close]

BLAST of CsaV3_3G038890 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 49.3 bits (116), Expect = 6.2e-06
Identity = 59/213 (27.70%), Postives = 82/213 (38.50%), Query Frame = 0


Query: 88  PPPMSNGSATQAVKSRMCNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHD--DPRSMGH 147
           PPP++ G+A    K+RMC K+  A  C+ G+ C+FAH   +L +P +   +   P   G 
Sbjct: 93  PPPVNKGTANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQ 152

Query: 148 IPNRLASR-MDAGPPGLA--ASFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKL 207
              R   R  +   P LA   +       KI +   L               C      L
Sbjct: 153 DRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDL 212

Query: 208 SIRDHESDPNLRNIELEGSFDQIKEASAMVQELIVTVSMAGPPKSATGATGGTAGPAGNN 267
           S    +S     +  +        + S     LI        P  A    GG        
Sbjct: 213 SKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTV--Y 272

Query: 268 FKTKLCDNF-AKGSCTFGERCHFAHGAAELRKS 295
           +KT+LC  F   G C FG++CHFAHG AEL  S
Sbjct: 273 WKTRLCMKFDITGQCPFGDKCHFAHGQAELHNS 302

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136573.1	8.6e-167	100.00	zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN59309.1 hypo...	[more]
XP_008443064.1	1.5e-158	95.61	PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo]	[more]
XP_038906130.1	1.6e-152	91.86	zinc finger CCCH domain-containing protein 14-like [Benincasa hispida]	[more]
XP_023526424.1	2.6e-139	84.75	zinc finger CCCH domain-containing protein 14-like [Cucurbita pepo subsp. pepo]	[more]
XP_022158356.1	3.4e-139	86.44	zinc finger CCCH domain-containing protein 14-like [Momordica charantia]	[more]

BLAST of CsaV3_3G038890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7F8R0	4.9e-88	60.98	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XPK1	2.3e-85	58.36	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	8.9e-82	58.74	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9C7C3	1.6e-70	51.15	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FG30	1.8e-66	49.83	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CsaV3_3G038890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG5	4.2e-167	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1	[more]
A0A1S3B785	7.1e-159	95.61	zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1E0P5	1.7e-139	86.44	zinc finger CCCH domain-containing protein 14-like OS=Momordica charantia OX=367...	[more]
A0A6J1J4L4	1.0e-136	82.71	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1F0S5	1.3e-136	83.39	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of CsaV3_3G038890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12130.1	1.1e-71	51.15	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT5G06770.1	1.3e-67	49.83	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G32360.1	1.6e-06	26.26	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	3.7e-06	35.45	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT3G19360.1	6.2e-06	27.70	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 167..237 e-value: 1.9E-12 score: 57.3
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 101..126 e-value: 0.64 score: 17.8 coord: 262..288 e-value: 1.7E-7 score: 40.9 coord: 34..61 e-value: 0.5 score: 18.7
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 263..287 e-value: 3.1E-9 score: 36.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 34..62 score: 12.389482
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 262..289 score: 16.1639
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 99..127 score: 12.436428
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 164..261 e-value: 1.0E-15 score: 59.4
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 158..238
None	No IPR available	GENE3D	4.10.1000.10		coord: 94..131 e-value: 5.5E-9 score: 37.2 coord: 262..294 e-value: 4.2E-13 score: 50.4
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 114..125 e-value: 0.032 score: 14.8 coord: 39..59 e-value: 0.2 score: 12.3
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 10..295
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 10..295
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 168..232 score: 14.738799
None	No IPR available	CDD	cd00105	KH-I	coord: 170..233 e-value: 1.46054E-15 score: 67.9703
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 170..234 e-value: 4.5E-12 score: 45.6
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 34..61
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 262..292
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 99..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038890.1	CsaV3_3G038890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding