CsaV3_3G038880 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038880
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	11 kDa late embryogenesis abundant protein-like
Location	chr3: 31971992 .. 31973465 (+)
RNA-Seq Expression	CsaV3_3G038880
Synteny	CsaV3_3G038880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACATTGCTCGTTAATAAAAAAATTATCCATACAAACTATAATTAGAAATTTGAATCTATACTTCTAACTACTTTTCAAAATAATTATATCAAACAAAGTATAAACATAATAATAAATTAAACGCAAATGAACTTAGAATTTAGAAACAGTAACAGAAGCAATGTATAAAAACGTAGTGATTCCATATAACAATATTCGATGTAGACGAGGCTTGGAAATAGTACGTGTAGGAGGCCATGGAGCTTTTCCTGCTTCGGATTGCCACACATCTCTCAAAGTCGCCACGTCATATCAAAATAAGATGACAAAGCTGGATTCTCCATCTCTCGCCACGCTCCCTCCACGTGGCGTCTTCATTAAGACACGTGTCCCAAGATAACGTCGTCTTCATGTCTATTTAATGGTCGTCACCGTTAATCCCGTTTCTACAAGAGGCGCTTTGGAAATACTTTAGAGAAAAAGAAATTCGAAATTATTGAAAGAAAAGAAGAACAAAAAAAAAAAAAGTAAAAATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACCGCTCAAGAAAAGGTTTTGAGTTTTTTTTCTTGAAGAAAAAACTTTTTTCTTTTATTTATTAACTTGCAAGTTGCACACGTGTTTGGTCGATTTGGTCGGTTTCTTTATTTATTAATTTTTTTATTGACATTTCTTTTTATTTATTTAAACTTCTAATATTTTTGGGAACTCTAGTATTTAGGGAGAACTAGAGAGGTGAAGTTATCAAAGTTGAGATTAAAAAAAATCAATGAATTAATTAATTGAATAAGGAAGTAATAATTGTAATCTTTTTGAGGACATTGACGAGAAAGGAAGGGTGGCCGGTGTTGTACAAAGGCTTTTTTTTAATAAAAACACGTGGCACGTGGTAAAATAAATATAATAATATAGAATGAATAATCACGTAAATAAATTTAAATAGAAAAGAATTGTAATGTGAATTACATTTCCACGCGTGCAAATGCCAGGTGGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACGCAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACCGTGGGGGGCCGCTAAGGGGCGTGGCCAGTTATATCTGGTGTGGTCAACCGGTTTATATGAATATGGCTTGCTTGCTTTGCTATGCTTTGTTTTTTCTTTCTAAAAAAAAGAATTTTAATAATCGATATAGTTGTTGATTATGAACACTGTGTATGTATTTTATGAAATAAAATTATAGTTAAAATATAGTTGCTTGTTTTTGGTATCACTTAATGGTCGGAAAAAT

mRNA sequence

ATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACCGCTCAAGAAAAGGTGGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACGCAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACCGTGGGGGGCCGCTAA

Coding sequence (CDS)

ATGCAATCGGGAAGAAACGCGGCGGAGGCGATGAAGGAATCGGCTGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACCGCTCAAGAAAAGGTGGACAAAATGCGGGCCCACGATCCATTTGAGAAAGACATGGCGAGAGAAAGGAAAGACGAGAGGATTCAGGAGGCTGAGCTGGACAAGCAGCAGGCACGTGTAGAACACGCAGCAGAGAGACAGACCGGTACAGGACCCGGGACCCGTACCGGTTTGGGAACCGGTACCCACACCTACGACCCGACCGTGGGGGGCCGCTAA

Protein sequence

MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR*

Homology

[Close]

BLAST of CsaV3_3G038880 vs. NCBI nr
Match: XP_031737964.1 (11 kDa late embryogenesis abundant protein-like [Cucumis sativus] >KGN59308.1 hypothetical protein Csa_001802 [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 1.9e-44
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ
Sbjct: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR 104
           EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR
Sbjct: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR 103

[Close]

BLAST of CsaV3_3G038880 vs. NCBI nr
Match: XP_038905932.1 (11 kDa late embryogenesis abundant protein-like [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 5.0e-37
Identity = 93/107 (86.92%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSGRNAAEA KESAANVGASAKAGMEK KA+AQEKVDKMRAHDP EKDMARERK+ERIQ
Sbjct: 1   MQSGRNAAEAAKESAANVGASAKAGMEKAKASAQEKVDKMRAHDPIEKDMARERKEERIQ 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTR------TGLGTGTHTYDPTVG 102
           EAELDKQQAR EHAA+RQTGTGPGTR      TG GTGTHTYDPTVG
Sbjct: 61  EAELDKQQARAEHAADRQTGTGPGTRVGLGTGTGTGTGTHTYDPTVG 107

[Close]

BLAST of CsaV3_3G038880 vs. NCBI nr
Match: TYK25405.1 (18 kDa seed maturation protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 4.0e-34
Identity = 85/93 (91.40%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
          MQSGRNAAEA+KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP+EK+M RE+KDERIQ
Sbjct: 1  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQ 60

Query: 61 EAELDKQQARVEHAAERQTGTGPGTRTGLGTGT 94
          EA+LDKQQAR EHAAERQ GTGPGTRTGLGTGT
Sbjct: 61 EADLDKQQARFEHAAERQAGTGPGTRTGLGTGT 93

[Close]

BLAST of CsaV3_3G038880 vs. NCBI nr
Match: XP_022971427.1 (11 kDa late embryogenesis abundant protein-like [Cucurbita maxima])

HSP 1 Score: 143.3 bits (360), Expect = 1.2e-30
Identity = 82/104 (78.85%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+ 
Sbjct: 1   MQSGKNAAESVKESAANVGASARAGMEKTKATAQEKVDKMRAHDPLEKDMASERKEERLH 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGL--GTGTHTYDPTVGG 103
            AELDKQQAR EHAAERQ  +  G  TGL  GTGT  YDPTVGG
Sbjct: 61  GAELDKQQARAEHAAERQAASKTGAHTGLTTGTGTRAYDPTVGG 104

[Close]

BLAST of CsaV3_3G038880 vs. NCBI nr
Match: XP_022940345.1 (11 kDa late embryogenesis abundant protein-like [Cucurbita moschata] >XP_023539729.1 11 kDa late embryogenesis abundant protein-like [Cucurbita pepo subsp. pepo] >XP_023539730.1 11 kDa late embryogenesis abundant protein-like [Cucurbita pepo subsp. pepo] >KAG6596235.1 18 kDa seed maturation protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027777.1 18 kDa seed maturation protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 84/108 (77.78%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+ 
Sbjct: 1   MQSGKNAAESVKESAANVGASARAGMEKTKATAQEKVDKMRAHDPLEKDMASERKEERLH 60

Query: 61  EAELDKQQARVEHAAERQ----TG--TGPGTRTGLGTGTHTYDPTVGG 103
            AELDKQQAR EHA ERQ    TG  TG  T TG GTGT  YDPTVGG
Sbjct: 61  GAELDKQQARAEHATERQAASKTGAHTGLTTGTGTGTGTRAYDPTVGG 108

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy Swiss-Prot
Match: P46515 (11 kDa late embryogenesis abundant protein OS=Helianthus annuus OX=4232 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21
Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NAA + KE+AANV ASAKAGMEKTKA+ QEK +KM AHDP +K+MARE+K+ER  
Sbjct: 1   MQSGKNAAASAKETAANVAASAKAGMEKTKASLQEKGEKMTAHDPMQKEMAREKKEERKH 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPT 100
           EAE +KQ A+  +AA++QT       TG+GTGTH+Y  T
Sbjct: 61  EAEYEKQAAKEHNAAQKQT-------TGIGTGTHSYTTT 92

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy Swiss-Prot
Match: Q01417 (18 kDa seed maturation protein OS=Glycine max OX=3847 GN=GMPM1 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 9.2e-18
Identity = 54/105 (51.43%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQ G+ A E++KE+A N+GASAKAGMEKTKAT QEK ++M A DP +K++A ++K+ ++ 
Sbjct: 1   MQGGKKAGESIKETATNIGASAKAGMEKTKATVQEKAERMTARDPVQKELATQKKEAKMN 60

Query: 61  EAELDKQQARVEHAAERQTGTGPG------TRTGLGTGTHTYDPT 100
           +AELDKQ AR  + A +Q+ T  G        TG GTGT TY  T
Sbjct: 61  QAELDKQAARQHNTAAKQSATTAGHMGHGHHTTGTGTGTATYSTT 105

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy Swiss-Prot
Match: Q9FG31 (Late embryogenesis abundant protein 46 OS=Arabidopsis thaliana OX=3702 GN=LEA46 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-13
Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 9   EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQ 68
           ++MKE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP +K MA + K+++I +AE+ K++
Sbjct: 2   QSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMQKRE 61

Query: 69  ARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG 102
            R +H A  +   G GT  GLGT TH+    VG
Sbjct: 62  TR-QHNAAMKEAAGAGTGLGLGTATHSTTGQVG 93

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy Swiss-Prot
Match: Q00747 (Protein LE25 OS=Solanum lycopersicum OX=4081 GN=LE25 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.9e-11
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 1  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
          MQ+G++AA A           AKAGMEKTKA  QEK ++M   DP +K+MA E+K++R+ 
Sbjct: 1  MQTGKDAASA-----------AKAGMEKTKANVQEKAERMTTRDPLKKEMATEKKEDRVA 60

Query: 61 EAELDKQQARVEHAAERQ--TGTGPGTRTGLG-TGTHT 96
           AE+ K+ A+ +HAAE+Q    TG GT TG G TG HT
Sbjct: 61 AAEMGKRDAKAQHAAEKQGAATTGTGT-TGYGATGNHT 86

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy Swiss-Prot
Match: P09441 (Late embryogenesis abundant protein D-113 OS=Gossypium hirsutum OX=3635 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-10
Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 13  ESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQARVE 72
           +S  +  ASAKAGMEK KA+ QEKVD+M+  DP EK+MARERK+ER ++AEL KQ+AR  
Sbjct: 2   QSMKDAAASAKAGMEKAKASMQEKVDQMKTRDPNEKEMARERKEERQEDAELRKQEARHH 61

Query: 73  HAAERQTGTGPGTRTGLGTGTHTYDPTVG 102
           +A     G G    TG  T  +    T G
Sbjct: 62  NATAGHVGGGGIGGTGYTTAGYNIGDTGG 90

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy TrEMBL
Match: A0A0A0LBV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808370 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.2e-45
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ
Sbjct: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR 104
           EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR
Sbjct: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVGGR 103

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy TrEMBL
Match: A0A5D3DPJ3 (18 kDa seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005470 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34
Identity = 85/93 (91.40%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
          MQSGRNAAEA+KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP+EK+M RE+KDERIQ
Sbjct: 1  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQ 60

Query: 61 EAELDKQQARVEHAAERQTGTGPGTRTGLGTGT 94
          EA+LDKQQAR EHAAERQ GTGPGTRTGLGTGT
Sbjct: 61 EADLDKQQARFEHAAERQAGTGPGTRTGLGTGT 93

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy TrEMBL
Match: A0A6J1I1X4 (11 kDa late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC111470154 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.8e-31
Identity = 82/104 (78.85%), Postives = 89/104 (85.58%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+ 
Sbjct: 1   MQSGKNAAESVKESAANVGASARAGMEKTKATAQEKVDKMRAHDPLEKDMASERKEERLH 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGL--GTGTHTYDPTVGG 103
            AELDKQQAR EHAAERQ  +  G  TGL  GTGT  YDPTVGG
Sbjct: 61  GAELDKQQARAEHAAERQAASKTGAHTGLTTGTGTRAYDPTVGG 104

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy TrEMBL
Match: A0A6J1FQA5 (11 kDa late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111445987 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.9e-30
Identity = 84/108 (77.78%), Postives = 90/108 (83.33%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSG+NAAE++KESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EKDMA ERK+ER+ 
Sbjct: 1   MQSGKNAAESVKESAANVGASARAGMEKTKATAQEKVDKMRAHDPLEKDMASERKEERLH 60

Query: 61  EAELDKQQARVEHAAERQ----TG--TGPGTRTGLGTGTHTYDPTVGG 103
            AELDKQQAR EHA ERQ    TG  TG  T TG GTGT  YDPTVGG
Sbjct: 61  GAELDKQQARAEHATERQAASKTGAHTGLTTGTGTGTGTRAYDPTVGG 108

[Close]

BLAST of CsaV3_3G038880 vs. ExPASy TrEMBL
Match: A0A6J1DVT9 (11 kDa late embryogenesis abundant protein-like OS=Momordica charantia OX=3673 GN=LOC111024847 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.6e-26
Identity = 77/102 (75.49%), Postives = 84/102 (82.35%), Query Frame = 0


Query: 1   MQSGRNAAEAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQ 60
           MQSGRNAAE+ KESAANVGA+A+AGM+KTKATAQEKVDKMRAHDP EKDMA  RK+ERI 
Sbjct: 1   MQSGRNAAESAKESAANVGAAARAGMDKTKATAQEKVDKMRAHDPVEKDMAEARKEERIT 60

Query: 61  EAELDKQQARVEHAAERQTGTGPGTRTGLGTGTHT-YDPTVG 102
           EAE++KQQAR  HAAERQ GT  GT  GL TGT T   PT G
Sbjct: 61  EAEINKQQARAAHAAERQAGT--GTLAGLATGTGTGVGPTTG 100

[Close]

BLAST of CsaV3_3G038880 vs. TAIR 10
Match: AT5G06760.1 (Late Embryogenesis Abundant 4-5 )

HSP 1 Score: 77.0 bits (188), Expect = 9.8e-15
Identity = 44/93 (47.31%), Postives = 66/93 (70.97%), Query Frame = 0


Query: 9   EAMKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPFEKDMARERKDERIQEAELDKQQ 68
           ++MKE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP +K MA + K+++I +AE+ K++
Sbjct: 2   QSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMQKRE 61

Query: 69  ARVEHAAERQTGTGPGTRTGLGTGTHTYDPTVG 102
            R +H A  +   G GT  GLGT TH+    VG
Sbjct: 62  TR-QHNAAMKEAAGAGTGLGLGTATHSTTGQVG 93

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737964.1	1.9e-44	100.00	11 kDa late embryogenesis abundant protein-like [Cucumis sativus] >KGN59308.1 hy...	[more]
XP_038905932.1	5.0e-37	86.92	11 kDa late embryogenesis abundant protein-like [Benincasa hispida]	[more]
TYK25405.1	4.0e-34	91.40	18 kDa seed maturation protein [Cucumis melo var. makuwa]	[more]
XP_022971427.1	1.2e-30	78.85	11 kDa late embryogenesis abundant protein-like [Cucurbita maxima]	[more]
XP_022940345.1	1.0e-29	77.78	11 kDa late embryogenesis abundant protein-like [Cucurbita moschata] >XP_0235397...	[more]

BLAST of CsaV3_3G038880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46515	1.4e-21	61.62	11 kDa late embryogenesis abundant protein OS=Helianthus annuus OX=4232 PE=2 SV=...	[more]
Q01417	9.2e-18	51.43	18 kDa seed maturation protein OS=Glycine max OX=3847 GN=GMPM1 PE=2 SV=1	[more]
Q9FG31	1.4e-13	47.31	Late embryogenesis abundant protein 46 OS=Arabidopsis thaliana OX=3702 GN=LEA46 ...	[more]
Q00747	4.9e-11	48.98	Protein LE25 OS=Solanum lycopersicum OX=4081 GN=LE25 PE=2 SV=1	[more]
P09441	1.4e-10	50.56	Late embryogenesis abundant protein D-113 OS=Gossypium hirsutum OX=3635 PE=2 SV=...	[more]

BLAST of CsaV3_3G038880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBV1	9.2e-45	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808370 PE=3 SV=1	[more]
A0A5D3DPJ3	1.9e-34	91.40	18 kDa seed maturation protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1I1X4	5.8e-31	78.85	11 kDa late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FQA5	4.9e-30	77.78	11 kDa late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DVT9	5.6e-26	75.49	11 kDa late embryogenesis abundant protein-like OS=Momordica charantia OX=3673 G...	[more]

BLAST of CsaV3_3G038880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06760.1	9.8e-15	47.31	Late Embryogenesis Abundant 4-5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 52..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..94
None	No IPR available	PANTHER	PTHR33493:SF2	LATE EMBRYOGENESIS ABUNDANT PROTEIN 46	coord: 1..97
IPR005513	Late embryogenesis abundant protein, LEA_1 subgroup	PFAM	PF03760	LEA_1	coord: 9..78 e-value: 4.7E-23 score: 81.6
IPR005513	Late embryogenesis abundant protein, LEA_1 subgroup	PANTHER	PTHR33493	LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038880.1	CsaV3_3G038880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy