CsaV3_3G038630 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038630
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Calcium load-activated calcium channel
Location	chr3: 31828236 .. 31828777 (-)
RNA-Seq Expression	CsaV3_3G038630
Synteny	CsaV3_3G038630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACAATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCTCCGTCGTCGGAATCTCCGTCTGCACCGCGGTCATCTGCGAAGCCATCTCATGGGTTCTAATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCCAAAATCACTGTCAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGACGATCCTACCGATTGTGCTATGGCGTTCTTGTACTTCCTCTGTTCTATCAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCAAGAGGCGCCGGAGCTGG

mRNA sequence

ATGGCCACAATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCTCCGTCGTCGGAATCTCCGTCTGCACCGCGGTCATCTGCGAAGCCATCTCATGGGTTCTAATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCCAAAATCACTGTCAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGACGATCCTACCGATTGTGCTATGGCGTTCTTGTACTTCCTCTGTTCTATCAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCAAGAGGCGCCGGAGCTGG

Coding sequence (CDS)

ATGGCCACAATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCTCCGTCGTCGGAATCTCCGTCTGCACCGCGGTCATCTGCGAAGCCATCTCATGGGTTCTAATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCCAAAATCACTGTCAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGACGATCCTACCGATTGTGCTATGGCGTTCTTGTACTTCCTCTGTTCTATCAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCAAGAGGCGCCGGAGCTGG

Protein sequence

MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAX

Homology

[Close]

BLAST of CsaV3_3G038630 vs. NCBI nr
Match: KAE8651131.1 (hypothetical protein Csa_001235, partial [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 5.2e-90
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. NCBI nr
Match: XP_004136557.1 (calcium load-activated calcium channel [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 5.2e-90
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. NCBI nr
Match: XP_038903426.1 (calcium load-activated calcium channel-like [Benincasa hispida])

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-89
Identity = 176/180 (97.78%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIP FSSFRYSDSL+VVGISVCTAV+CEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPFFSSFRYSDSLTVVGISVCTAVVCEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. NCBI nr
Match: KAG6596248.1 (Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027791.1 Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.8 bits (865), Expect = 5.7e-89
Identity = 175/180 (97.22%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+VVGISVCTA++CEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAIVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. NCBI nr
Match: XP_008443026.1 (PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis melo] >KAA0043751.1 transmembrane and coiled-coil domain-containing protein 1 [Cucumis melo var. makuwa] >TYK25382.1 transmembrane and coiled-coil domain-containing protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 7.5e-89
Identity = 177/180 (98.33%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy Swiss-Prot
Match: Q3T0N3 (Calcium load-activated calcium channel OS=Bos taurus OX=9913 GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-38
Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA 179
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAA 170

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy Swiss-Prot
Match: Q9UM00 (Calcium load-activated calcium channel OS=Homo sapiens OX=9606 GN=TMCO1 PE=1 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-38
Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 53  STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 112

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 113 GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 172

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA 179
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A
Sbjct: 173 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAA 221

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy Swiss-Prot
Match: Q921L3 (Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-38
Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA 179
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAA 170

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy Swiss-Prot
Match: C5HGF3 (Calcium load-activated calcium channel OS=Sus scrofa OX=9823 GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-38
Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA 179
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAA 170

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy Swiss-Prot
Match: Q5R9B0 (Calcium load-activated calcium channel OS=Pongo abelii OX=9601 GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-38
Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 0


Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA 179
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAA 170

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy TrEMBL
Match: A0A0A0LGX0 (Calcium load-activated calcium channel OS=Cucumis sativus OX=3659 GN=Csa_3G799650 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy TrEMBL
Match: A0A5A7TQC2 (Calcium load-activated calcium channel OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005230 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89
Identity = 177/180 (98.33%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy TrEMBL
Match: A0A1S3B750 (Calcium load-activated calcium channel OS=Cucumis melo OX=3656 GN=LOC103486745 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.6e-89
Identity = 177/180 (98.33%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy TrEMBL
Match: A0A6J1DAX6 (Calcium load-activated calcium channel OS=Momordica charantia OX=3673 GN=LOC111019313 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88
Identity = 174/180 (96.67%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+VVGISVCTAV+CEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAVVCEAISWLLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKI+VKKSKTKKIDR+ETSLKES+RDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKISVKKSKTKKIDRVETSLKESNRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. ExPASy TrEMBL
Match: A0A6J1J172 (Calcium load-activated calcium channel OS=Cucurbita maxima OX=3661 GN=LOC111481756 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.2e-88
Identity = 174/180 (96.67%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+VVGISVCTAVICEAISW+LIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVVGISVCTAVICEAISWILIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTD+SKI VKKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDTSKINVKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGL GDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLLGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

[Close]

BLAST of CsaV3_3G038630 vs. TAIR 10
Match: AT3G12030.1 (Protein of unknown function DUF106, transmembrane )

HSP 1 Score: 292.0 bits (746), Expect = 3.4e-79
Identity = 150/178 (84.27%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 3   TIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKT 62
           TIPLF+SF+Y+DSL+VVGIS CTA++CEAISW+LIYRT+SYK+L+ SIDKA KKLETMKT
Sbjct: 4   TIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKYSIDKATKKLETMKT 63

Query: 63  D--SSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 122
           +  SSK+++KKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 64  ENPSSKLSIKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 123

Query: 123 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA 179
           VVAKLPF P  +V KMSHRGL+GDDPTDC+MAFLY LCSISIRTNLQKFLGFSPPRGA
Sbjct: 124 VVAKLPFHPITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGA 181

[Close]

BLAST of CsaV3_3G038630 vs. TAIR 10
Match: AT5G06660.1 (Protein of unknown function DUF106, transmembrane )

HSP 1 Score: 289.3 bits (739), Expect = 2.2e-78
Identity = 153/181 (84.53%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 1   MAT-IPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLET 60
           MAT IPLF+SF+Y+DSL+VVGIS CTA++CEAISW+LIYRT+SYK+L+SSIDKA+KKLET
Sbjct: 1   MATAIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLET 60

Query: 61  MKTD--SSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120
           MKTD  SSK+T KKSKTKKIDR+E+SLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF
Sbjct: 61  MKTDNPSSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120

Query: 121 EGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 179
           EGKVVAKLPF P  +V KMSHRGL+GDD TDC+MAFLY LCSISIRTNLQKFLGFSPPRG
Sbjct: 121 EGKVVAKLPFHPITIVRKMSHRGLKGDDSTDCSMAFLYLLCSISIRTNLQKFLGFSPPRG 180

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651131.1	5.2e-90	100.00	hypothetical protein Csa_001235, partial [Cucumis sativus]	[more]
XP_004136557.1	5.2e-90	100.00	calcium load-activated calcium channel [Cucumis sativus]	[more]
XP_038903426.1	5.7e-89	97.78	calcium load-activated calcium channel-like [Benincasa hispida]	[more]
KAG6596248.1	5.7e-89	97.22	Calcium load-activated calcium channel, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_008443026.1	7.5e-89	98.33	PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis me...	[more]

BLAST of CsaV3_3G038630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3T0N3	8.2e-38	47.06	Calcium load-activated calcium channel OS=Bos taurus OX=9913 GN=TMCO1 PE=2 SV=1	[more]
Q9UM00	8.2e-38	47.06	Calcium load-activated calcium channel OS=Homo sapiens OX=9606 GN=TMCO1 PE=1 SV=...	[more]
Q921L3	8.2e-38	47.06	Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV...	[more]
C5HGF3	8.2e-38	47.06	Calcium load-activated calcium channel OS=Sus scrofa OX=9823 GN=TMCO1 PE=2 SV=1	[more]
Q5R9B0	8.2e-38	47.06	Calcium load-activated calcium channel OS=Pongo abelii OX=9601 GN=TMCO1 PE=2 SV=...	[more]

BLAST of CsaV3_3G038630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGX0	2.5e-90	100.00	Calcium load-activated calcium channel OS=Cucumis sativus OX=3659 GN=Csa_3G79965...	[more]
A0A5A7TQC2	3.6e-89	98.33	Calcium load-activated calcium channel OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B750	3.6e-89	98.33	Calcium load-activated calcium channel OS=Cucumis melo OX=3656 GN=LOC103486745 P...	[more]
A0A6J1DAX6	1.4e-88	96.67	Calcium load-activated calcium channel OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1J172	5.2e-88	96.67	Calcium load-activated calcium channel OS=Cucurbita maxima OX=3661 GN=LOC1114817...	[more]

BLAST of CsaV3_3G038630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12030.1	3.4e-79	84.27	Protein of unknown function DUF106, transmembrane	[more]
AT5G06660.1	2.2e-78	84.53	Protein of unknown function DUF106, transmembrane	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..63
IPR002809	Integral membrane protein EMC3/TMCO1-like	SMART	SM01415	DUF106_2	coord: 14..174 e-value: 1.2E-36 score: 137.8
IPR002809	Integral membrane protein EMC3/TMCO1-like	PFAM	PF01956	EMC3_TMCO1	coord: 17..173 e-value: 7.4E-31 score: 107.2
IPR008559	Calcium load-activated calcium channel	PIRSF	PIRSF023322	UCP023322_TM_coiled-coil	coord: 5..180 e-value: 3.0E-74 score: 246.7
IPR008559	Calcium load-activated calcium channel	PANTHER	PTHR20917	PNAS-RELATED	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038630.1	CsaV3_3G038630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032469	endoplasmic reticulum calcium ion homeostasis
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005262	calcium channel activity