CsaV3_3G038120 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038120
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CSL zinc finger domain-containing protein
Location	chr3: 31392304 .. 31395141 (-)
RNA-Seq Expression	CsaV3_3G038120
Synteny	CsaV3_3G038120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGCTTTTGTGATTGGGCTGGGCCCATTTCAAAACGAGCCCATTTAAAGTTTTGAATTCGGAATCTCTTTCTGCTTCTCCATGAAGTTTGACTCTTTACCATCACCGTTGACAACTTCGGTGCCGGTTTTTCTTCTTCGGCAGAAGTTTCCATTTCGACCATGGCGATTTCCTATCTCTCACCGGCGTCCGGCGTGCTGATTCTCTTGGTTACGGCGGTGGTTATCGAAGCTAGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAAATTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGGAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTTGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCATCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGGTTAGTTCTTCAAACTCTGCGTTCTTTGTTGATGTTGAATTTTTGGGTTTTCTGTTTGCTATTCGTTTGAAGATGAAACTAGTTTTACTTAGGATTTGTGCGAGTATTTGTCTAATGCAACGATCAATTTGTTTTGTGGGATAAGAGTGATAGGCTTTGTTAACTCTCCAACTAGGGCTTAGGAGGCAAAAAGAGCAGATCCTTATGAAATCACTTCGCCTACTTTGATTGCCTGATGCTAGTTCGATTTGATTTGGGATTTTTCGGTGTGTTATTTGATCATTGAGGGAAATTAGTAATCAATCTCCGTTTTTTGATAGTCTGCACGATTCAGTTTTATTGAGAAACTCAAATCTCAAACTTTAATAGGGAAAAAAGAAGGAACTTAGTTGGTGTTTGAGAGAGTAGAACCATATTAGAAGGAAGAAATTTATATCTCTGCTAGTTTGATTTCTATTGCTCACATAATTATGAATTTCTTTCTACTAGTTTATCTACGTTACCATCCTAGTTTTGGGTTCTTGTTACAAGTAAAGGAAACTGGGAAATTGAAGTTGGAACCTCTTGGTTCTTGGGACATACAAGTGTCAATCGAGCTAAGCTCTTGATGACATTTTGAGTTCTTATTACCAATCATGGACTCATGATTTCTTTTTCTCTTCTTTCATTATCAGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTTGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTAAGTTTATCTATTTATGGCATAGAAAGTATGCAATGATGATTTGATCCAGCTGTAAACAGGAAGCATGATCTTATAAAACTTAGGAGATCATGAGTTTGATCCATGGTGGTTAAGATTTAATATTCTGTGAGTTTTCCCGTCCAAATGTTGTAGGGTTAGACTAGTAATCTCGTGAGATTAGTCCAAATTCGTGTAAGCTGTTCAGACACTTACAAATATAATATATATATATATATAAATAAATAAAGACATAGAACGTATGGTATGGAATAGAATAACGTAACCTAAAGACCAGAGACACAATACTACACTAACTTGGTGGTATGTTTATTCAGAATTCAATGGATATATGGCAGAGGGTCGCATTGTAACAAATTTACTTTTATGTGAATGTGGTTGCCATAATATGGCAGTTTCCATTATTTTCGTTGTTAATCTCATTTATCCAACTGTGTAAAACTAATCGTGACATTATGACAGCATCCTTGGGTGAGAAGGGTAGGAGTTAGTGTTAGAGATGTGAGTGGGTAGGCTTGATAAAACATGATATGTTCAACATTTTCAAAACAGGATTTTAATTGTTTAGTTTCCCTCCGGAAACAAAAGATTAGATGAAAATAAGGTTGTATATATGTTTTTAGATGTGTGTTAGTGTTTGATAGCATATTTAGAAATTAGATTTTAAGTTAAGTAATTGTTCAAAATGTGTTTGATAAGCTATTTATAAACCATAAAACTACTTTACAATATTTGGTCAAGTATAAACTGTTAATTATTAAAATTTGTGACATGTTTTATTTTAAAATTTTCTATAATTATTATTTTGTAATATCCTGTAATTTATAATAGGTTTGTTCTTTTAATTTTAAAAAATAGAAACTAGATCGCCTACCAAACACTTCTTCAACAAATCTAAAATTGTAAAACATAATCTAGACTGACTTCCAAACAGCTCCTCCGAGATTAAATAAATAATCCATTGTTTTTTCTTGTGGATAGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGATGGTTGTGCTCGATGTTCAAACAATAGCACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAATAATGGTGGTTCCGTCGATTGTAGTCTCGCGATTCAGTTAGCATTCTCCGGCACGGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAGGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAATAGACCATATTTCTGTTGATGTATATTGTCATGATTTCCATCATTGTATGTTATAATTCAGTTTGTGCAACAAATTCGTTTGAAATCTTCTACATTTCTCATTAACTAAATGTGTTACAATAGGTTTGGGACGGCTAGTGTTTTGTATGTATTTTGTATACAATATCATAGTGTTCAATTTCTTCTCTTTCCCCCTTTGTTTGTTGCCTTTCCCTTCGTTCCAATAGTCCAATGCCTATTTTTGGGCTCTCTGTTTCTGTCG

mRNA sequence

ATGGCGATTTCCTATCTCTCACCGGCGTCCGGCGTGCTGATTCTCTTGGTTACGGCGGTGGTTATCGAAGCTAGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAAATTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGGAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTTGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCATCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTTGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGATGGTTGTGCTCGATGTTCAAACAATAGCACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAATAATGGTGGTTCCGTCGATTGTAGTCTCGCGATTCAGTTAGCATTCTCCGGCACGGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAGGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAA

Coding sequence (CDS)

ATGGCGATTTCCTATCTCTCACCGGCGTCCGGCGTGCTGATTCTCTTGGTTACGGCGGTGGTTATCGAAGCTAGCGACAACAACCGAGTTTTCTCACCTTGCACTGACACAACTGTTGAAAATTCCGACGGCTTCACCTTAGGGTTTGCTTTTGCGACGGAGCAGAAGTTTTTCTTCAACAAAACATTGCAGTTGTCTCCTTGCGATAGCAGGCTTGGTCTTACGAATGGAAATTCTCTGATCTCTGTGTTTAGACCTAAGGTTGATGAGATCTCCCTCCTCACCATCAACACTTCTCGCTCTGTGTCCTCCTTCGATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCTCCAATTTTTGTTGCAGATCAACAGCATATCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAAAAAGGAAGGCTGCAAAACTTGTTCTGGAAAAGGGATGGTTGTGCTCGATGTTCAAACAATAGCACCTTTGTTTGCATCCACAATCAGGATTGCGCAATCAGAACAAACAGCTGCAAAAATAATGGTGGTTCCGTCGATTGTAGTCTCGCGATTCAGTTAGCATTCTCCGGCACGGATAAGCACCTTTCTGTCTTCAACTCTTGGTATGAAGTGTCGAGACTTCGTCAGTACTCACTCTTCAATCTGTATTCGAACCTCAAGGATTCTCTCACAAGTCAGTATAACAAGATTTTCTAA

Protein sequence

MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF*

Homology

[Close]

BLAST of CsaV3_3G038120 vs. NCBI nr
Match: XP_004136522.1 (uncharacterized protein LOC101209667 [Cucumis sativus] >KGN59226.1 hypothetical protein Csa_001956 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 3.6e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of CsaV3_3G038120 vs. NCBI nr
Match: XP_008442938.1 (PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo] >KAA0043800.1 uncharacterized protein E6C27_scaffold236G001320 [Cucumis melo var. makuwa] >TYK25333.1 uncharacterized protein E5676_scaffold352G004720 [Cucumis melo var. makuwa])

HSP 1 Score: 473.8 bits (1218), Expect = 9.1e-130
Identity = 235/245 (95.92%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISY SPAS VLILLVTAV++EA DNNRVFSPCTDTTVE SDGFTLGFAFAT+QKFFFN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLT+NTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of CsaV3_3G038120 vs. NCBI nr
Match: XP_038903347.1 (uncharacterized protein LOC120089965 [Benincasa hispida])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 227/245 (92.65%), Postives = 234/245 (95.51%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAIS L PAS VL+L VTAVV+EA DNNRVFS CTDTTVE SDGFTLGFAFATEQKF FN
Sbjct: 1   MAISDLLPASVVLLLFVTAVVVEAGDNNRVFSTCTDTTVEKSDGFTLGFAFATEQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQH VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHTVTSFTLVLEFEKGRLQNLFWKRDGCAKCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTN+CKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLFNLYSNLK SLTSQ
Sbjct: 181 RTNNCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLFNLYSNLKGSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of CsaV3_3G038120 vs. NCBI nr
Match: XP_022935582.1 (uncharacterized protein LOC111442414 [Cucurbita moschata] >KAG6580758.1 hypothetical protein SDJN03_20760, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017511.1 hypothetical protein SDJN02_19376 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428.3 bits (1100), Expect = 4.4e-116
Identity = 217/245 (88.57%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAIS LSP S VL+LLVTAVV+EA DNNRVFSPC DTTVE SDGFTLG AFATEQKF FN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGN+LISVFRPKVDEISLLT+NT+ SVSSF+PSS+GYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFV+D QHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNN TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTN+CKN+ G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTNNCKNS-GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 244

[Close]

BLAST of CsaV3_3G038120 vs. NCBI nr
Match: XP_022983083.1 (uncharacterized protein LOC111481736 [Cucurbita maxima])

HSP 1 Score: 427.9 bits (1099), Expect = 5.7e-116
Identity = 216/245 (88.16%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAIS LSP S VL+LLVTAVV+EA DNNRVFSPC DTTVE SDGFTLG AFATEQKF FN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGN+LISVFRPKVDEISLLT+NT+ SVS+F+PSSNGYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSTFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFV+D QHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNN TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTN+CKN+ G VDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTNNCKNS-GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLVDLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 244

[Close]

BLAST of CsaV3_3G038120 vs. ExPASy TrEMBL
Match: A0A0A0LGU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of CsaV3_3G038120 vs. ExPASy TrEMBL
Match: A0A5A7TKL4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004720 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.4e-130
Identity = 235/245 (95.92%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISY SPAS VLILLVTAV++EA DNNRVFSPCTDTTVE SDGFTLGFAFAT+QKFFFN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLT+NTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of CsaV3_3G038120 vs. ExPASy TrEMBL
Match: A0A1S3B6Y8 (uncharacterized protein LOC103486692 OS=Cucumis melo OX=3656 GN=LOC103486692 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.4e-130
Identity = 235/245 (95.92%), Postives = 241/245 (98.37%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAISY SPAS VLILLVTAV++EA DNNRVFSPCTDTTVE SDGFTLGFAFAT+QKFFFN
Sbjct: 1   MAISYPSPASAVLILLVTAVLVEAGDNNRVFSPCTDTTVETSDGFTLGFAFATQQKFFFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLT+NTSRSVSSFDPSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTVNTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCIHNQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCIHNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 245

[Close]

BLAST of CsaV3_3G038120 vs. ExPASy TrEMBL
Match: A0A6J1F5Z3 (uncharacterized protein LOC111442414 OS=Cucurbita moschata OX=3662 GN=LOC111442414 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116
Identity = 217/245 (88.57%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAIS LSP S VL+LLVTAVV+EA DNNRVFSPC DTTVE SDGFTLG AFATEQKF FN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGN+LISVFRPKVDEISLLT+NT+ SVSSF+PSS+GYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFV+D QHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNN TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTN+CKN+ G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTNNCKNS-GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 244

[Close]

BLAST of CsaV3_3G038120 vs. ExPASy TrEMBL
Match: A0A6J1J6R6 (uncharacterized protein LOC111481736 OS=Cucurbita maxima OX=3661 GN=LOC111481736 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.8e-116
Identity = 216/245 (88.16%), Postives = 230/245 (93.88%), Query Frame = 0


Query: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60
           MAIS LSP S VL+LLVTAVV+EA DNNRVFSPC DTTVE SDGFTLG AFATEQKF FN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL LTNGN+LISVFRPKVDEISLLT+NT+ SVS+F+PSSNGYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSTFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180
           YAARSPPIFV+D QHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNN TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240
           RTN+CKN+ G VDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSL +LYSNLKDSLTSQ
Sbjct: 181 RTNNCKNS-GPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLVDLYSNLKDSLTSQ 240

Query: 241 YNKIF 246
           YNKIF
Sbjct: 241 YNKIF 244

[Close]

BLAST of CsaV3_3G038120 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-83
Identity = 148/233 (63.52%), Postives = 183/233 (78.54%), Query Frame = 0


Query: 16  LVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFF---NKTLQLSPCDSRL 75
           ++T+ + EA DNN+V+SPC+D+TV   DGFT G AFA +  FF    +K++Q SPCD R 
Sbjct: 14  VLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRH 73

Query: 76  GLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRKYAARSPPIFVAD 135
              NGNS ++VFRPKVDEI+LLTINTS S S    +S GYMVAFAG KYAARS PI VAD
Sbjct: 74  LSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVAD 133

Query: 136 QQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAIRTNSCKNNGGSV 195
             HIVTSFTLVLEF+KGRL+N+FWK+DGC++CS +S FVC++ ++CAI+  +CKN GG V
Sbjct: 134 SNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQV 193

Query: 196 DCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQYNKIF 246
           DCSL IQLAFSGTDKH +  NSWYEV+ L+QYSL+ LYSNLKDSLT+ +  IF
Sbjct: 194 DCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNIF 246

[Close]

BLAST of CsaV3_3G038120 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 302.8 bits (774), Expect = 2.6e-82
Identity = 152/247 (61.54%), Postives = 182/247 (73.68%), Query Frame = 0


Query: 9   ASGVLILLVTAVVI----------EASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFF 68
           +S  L LLV + VI           + + N ++SPC+DT ++ SDGFT G AF++   FF
Sbjct: 3   SSKTLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFF 62

Query: 69  FNKTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAG 128
            N+T+ LSPCD RL L   NS  SVFRPK+DEISLL+INTS   + F  +  GYMVAFAG
Sbjct: 63  INQTVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTS---AFFPDNYGGYMVAFAG 122

Query: 129 RKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDC 188
           RKYAARS P F+A+   IVTSFTLV+EF+KGRLQNL+WKRDGCA C  N  FVC++ QDC
Sbjct: 123 RKYAARSIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDC 182

Query: 189 AIRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLT 246
           AIRT SCK  GG+VDCSL IQLAFSGTDKHL+V NSWYEV  L+QYSL+ LYSNLK SLT
Sbjct: 183 AIRTPSCKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLT 242

[Close]

BLAST of CsaV3_3G038120 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 235.3 bits (599), Expect = 5.1e-62
Identity = 122/242 (50.41%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 12  VLILLVTAVV---IEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFNKTLQLSPC 71
           ++I+++  +V   + A+DNN V+SPC+DT +   DGFT+G A ++++ FF ++ +QLSPC
Sbjct: 127 MMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ-VQLSPC 186

Query: 72  DSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPS-SNGYMVAFAGRKYAARSPP 131
           D+RLGL    + +++FRPKVDEISLL+I+TS+    F+PS + G+MV FAG KYAARS P
Sbjct: 187 DTRLGLAAKMAQLALFRPKVDEISLLSIDTSK----FNPSEAGGFMVGFAGSKYAARSYP 246

Query: 132 IFVADQQHIVTSFT---------LVLEFEKGRLQNLFWKRDGCARC--SNNSTFVCIHNQ 191
           + VAD  + +T+FT         LVLEF+KG LQNLFWK  GC  C  + +S+ VC++  
Sbjct: 247 VKVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGT 306

Query: 192 DCAIRTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDS 239
           DCA+ T+ CK NGG  +C++ IQ+AFSGTD++L   N+WYEV+ LRQYSL +LY+N  DS
Sbjct: 307 DCAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDS 363

[Close]

BLAST of CsaV3_3G038120 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-10
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 112 YMVAFAGRKYAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCAR 164
           Y V   G +  +   P F+A+   IVTSFT V+EF+KGRLQNL+WKRD CA+
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136522.1	3.6e-134	100.00	uncharacterized protein LOC101209667 [Cucumis sativus] >KGN59226.1 hypothetical ...	[more]
XP_008442938.1	9.1e-130	95.92	PREDICTED: uncharacterized protein LOC103486692 [Cucumis melo] >KAA0043800.1 unc...	[more]
XP_038903347.1	1.3e-123	92.65	uncharacterized protein LOC120089965 [Benincasa hispida]	[more]
XP_022935582.1	4.4e-116	88.57	uncharacterized protein LOC111442414 [Cucurbita moschata] >KAG6580758.1 hypothet...	[more]
XP_022983083.1	5.7e-116	88.16	uncharacterized protein LOC111481736 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G038120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G038120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGU1	1.7e-134	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1	[more]
A0A5A7TKL4	4.4e-130	95.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6Y8	4.4e-130	95.92	uncharacterized protein LOC103486692 OS=Cucumis melo OX=3656 GN=LOC103486692 PE=...	[more]
A0A6J1F5Z3	2.1e-116	88.57	uncharacterized protein LOC111442414 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]
A0A6J1J6R6	2.8e-116	88.16	uncharacterized protein LOC111481736 OS=Cucurbita maxima OX=3661 GN=LOC111481736...	[more]

BLAST of CsaV3_3G038120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11800.1	3.1e-83	63.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G44150.1	2.6e-82	61.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	5.1e-62	50.41	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	3.5e-10	53.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 1..245
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 1..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038120.1	CsaV3_3G038120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
molecular_function	GO:0046872	metal ion binding