CsaV3_3G037830 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G037830
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionNDR1/HIN1-Like protein 3-like
Locationchr3: 31185737 .. 31186380 (-)
RNA-Seq ExpressionCsaV3_3G037830
SyntenyCsaV3_3G037830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAATCGATGGATATGAATTCCAATACATTAACCCCTCTCAATAACCATGTCCAGAACTAAGAAGTGCATCATATTCACCATTGTCATTATCGTTTTAATTCTCATTTCCTTGTTCATCTTATGGCTCATGACCATGACCCGCAAACTCAAGTTCCAAGTGAACAACGCCAACTTGACCCAATTCAACTTAACCGACGACAGCCAACTCCTCTTCCAACTTAGCCTTAACATGACGGTCAAAAACCCTAATCGTGGCTTTGGAGTGTTCTTTGACAGCATCGAAGTGGCTGTGTTGTATCAAGGCATTAAGTTTAGCAACGTGTCTTTGTCGCCATTTTACCAAGGTCAAGAGGGAAAGAGTTCGCTGAATTTTAGGTTTGATGGTCAACAATTGATGAATCTTGACGCTAAGCAACTGGCTGTGTTCACTTTGGAGCAACTTGTTGATATCTTCTCCATTAAAGTGGAGCTTCGTCTTCATATGAGAGTTAAGATTGGTTTCATTAGAATCAAACTCAATCCCAAGGTTCGTTGTGGCCTTAATCTTCCCTTGATTTCTCATGAAAGATCGTTATTTCGGTTTCGGATTATCGGTTGCTTCGTCACTTATTGATTTCTTTTGTTTTATGTTTTTATTTTAAG

mRNA sequence

ATGTCCAGAACTAAGAAGTGCATCATATTCACCATTGTCATTATCGTTTTAATTCTCATTTCCTTGTTCATCTTATGGCTCATGACCATGACCCGCAAACTCAAGTTCCAAGTGAACAACGCCAACTTGACCCAATTCAACTTAACCGACGACAGCCAACTCCTCTTCCAACTTAGCCTTAACATGACGGTCAAAAACCCTAATCGTGGCTTTGGAGTGTTCTTTGACAGCATCGAAGTGGCTGTGTTGTATCAAGGCATTAAGTTTAGCAACGTGTCTTTGTCGCCATTTTACCAAGGTCAAGAGGGAAAGAGTTCGCTGAATTTTAGGTTTGATGGTCAACAATTGATGAATCTTGACGCTAAGCAACTGGCTGTGTTCACTTTGGAGCAACTTGTTGATATCTTCTCCATTAAAGTGGAGCTTCGTCTTCATATGAGAGTTAAGATTGGTTTCATTAGAATCAAACTCAATCCCAAGGTTCGTTGTGGCCTTAATCTTCCCTTGATTTCTCATGAAAGATCGTTATTTCGGTTTCGGATTATCGGTTGCTTCGTCACTTATTGA

Coding sequence (CDS)

ATGTCCAGAACTAAGAAGTGCATCATATTCACCATTGTCATTATCGTTTTAATTCTCATTTCCTTGTTCATCTTATGGCTCATGACCATGACCCGCAAACTCAAGTTCCAAGTGAACAACGCCAACTTGACCCAATTCAACTTAACCGACGACAGCCAACTCCTCTTCCAACTTAGCCTTAACATGACGGTCAAAAACCCTAATCGTGGCTTTGGAGTGTTCTTTGACAGCATCGAAGTGGCTGTGTTGTATCAAGGCATTAAGTTTAGCAACGTGTCTTTGTCGCCATTTTACCAAGGTCAAGAGGGAAAGAGTTCGCTGAATTTTAGGTTTGATGGTCAACAATTGATGAATCTTGACGCTAAGCAACTGGCTGTGTTCACTTTGGAGCAACTTGTTGATATCTTCTCCATTAAAGTGGAGCTTCGTCTTCATATGAGAGTTAAGATTGGTTTCATTAGAATCAAACTCAATCCCAAGGTTCGTTGTGGCCTTAATCTTCCCTTGATTTCTCATGAAAGATCGTTATTTCGGTTTCGGATTATCGGTTGCTTCGTCACTTATTGA

Protein sequence

MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFVTY*
Homology
BLAST of CsaV3_3G037830 vs. NCBI nr
Match: KAE8651106.1 (hypothetical protein Csa_001623 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 5.6e-95
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0

Query: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60
           MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL
Sbjct: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60

Query: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120
           NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD
Sbjct: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120

Query: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR 180
           AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR
Sbjct: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR 180

Query: 181 IIGCFVTY 189
           IIGCFVTY
Sbjct: 181 IIGCFVTY 188

BLAST of CsaV3_3G037830 vs. NCBI nr
Match: XP_004136710.2 (uncharacterized protein LOC101218041 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 5.2e-93
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0

Query: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60
           MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL
Sbjct: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60

Query: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120
           NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD
Sbjct: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120

Query: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR 180
           AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR
Sbjct: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR 180

Query: 181 IIGCF 186
           IIGCF
Sbjct: 181 IIGCF 185

BLAST of CsaV3_3G037830 vs. NCBI nr
Match: TYK25308.1 (NDR1/HIN1-Like protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 1.7e-83
Identity = 167/188 (88.83%), Postives = 178/188 (94.68%), Query Frame = 0

Query: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60
           MSRTKK IIF+I++IVLILISLFILWLMTMTRKLKFQVNNA LT+FNLT+ SQLLFQLSL
Sbjct: 1   MSRTKKFIIFSIIVIVLILISLFILWLMTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSL 60

Query: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120
           NM V+NPNRGFGVFFDSIEVAVLYQ IKFSN+SLSPFYQG+EGKS LNFRFDGQQLMNLD
Sbjct: 61  NMMVQNPNRGFGVFFDSIEVAVLYQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLD 120

Query: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR 180
           A+QLAVFTLE+LVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPL+SH RS  RFR
Sbjct: 121 AEQLAVFTLEKLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFR 180

Query: 181 IIGCFVTY 189
           IIGCFV Y
Sbjct: 181 IIGCFVAY 188

BLAST of CsaV3_3G037830 vs. NCBI nr
Match: XP_038904446.1 (NDR1/HIN1-like protein 10 [Benincasa hispida])

HSP 1 Score: 311.2 bits (796), Expect = 6.0e-81
Identity = 164/188 (87.23%), Postives = 172/188 (91.49%), Query Frame = 0

Query: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60
           MSRTKK IIFTI+IIVL+LISLFILWL+T T KLKFQV NANLTQFN TDDSQLLFQLSL
Sbjct: 1   MSRTKKFIIFTIIIIVLVLISLFILWLITKTHKLKFQVTNANLTQFNFTDDSQLLFQLSL 60

Query: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120
           NMTVKNPNRGFGVFFDSIEV VLYQ IKFSNVSLSPFYQGQEGKS LN  FDGQQLMNLD
Sbjct: 61  NMTVKNPNRGFGVFFDSIEVVVLYQDIKFSNVSLSPFYQGQEGKSLLNLSFDGQQLMNLD 120

Query: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR 180
           A+QLAVFTLE+L+DIFSIK+ELRL MRVKIGFIRIKLNPKVRCGLNLPLISH RS  RFR
Sbjct: 121 AQQLAVFTLEKLLDIFSIKLELRLRMRVKIGFIRIKLNPKVRCGLNLPLISHGRSFIRFR 180

Query: 181 IIGCFVTY 189
           II C+V Y
Sbjct: 181 IIDCYVAY 188

BLAST of CsaV3_3G037830 vs. NCBI nr
Match: KAA0043824.1 (NDR1/HIN1-Like protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 285.0 bits (728), Expect = 4.6e-73
Identity = 144/161 (89.44%), Postives = 152/161 (94.41%), Query Frame = 0

Query: 28  MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI 87
           MTMTRKLKFQVNNA LT+FNLT+ SQLLFQLSLNM V+NPNRGFGVFFDSIEVAVLYQ I
Sbjct: 1   MTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDI 60

Query: 88  KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR 147
           KFSN+SLSPFYQG+EGKS LNFRFDGQQLMNLDA+QLAVFTLE+LVDIFSIKVELRLHMR
Sbjct: 61  KFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMR 120

Query: 148 VKIGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFVTY 189
           VKIGFIRIKLNPKVRCGLNLPL+SH RS  RFRIIGCFV Y
Sbjct: 121 VKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 161

BLAST of CsaV3_3G037830 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 59/161 (36.65%), Postives = 102/161 (63.35%), Query Frame = 0

Query: 12  IVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTD-DSQLLFQLSLNMTVKNPNRG 71
           I +IV++ ++  I WL+   R +KF V +A+LT+F+ T  D+ L + L+L + V+NPN+ 
Sbjct: 46  ISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKR 105

Query: 72  FGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLE 131
            G+++D IE    Y+G +FS ++L+PFYQG +  + L   F GQ L+  +A Q      E
Sbjct: 106 IGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAE 165

Query: 132 QLVDIFSIKVELRLHMRVKIGFIRI-KLNPKVRC-GLNLPL 170
           ++  +++I+++ RL +R K+G ++  ++ PKV C  L LPL
Sbjct: 166 RISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPL 206

BLAST of CsaV3_3G037830 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.3e-21
Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 0

Query: 8   IIFTIVIIVLIL--ISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVK 67
           +IF I+I + +L  I+  I+WL+     +KF V +A LT+F L   + L + L LN T++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 68  NPNRGFGVFFDSIEVAVLYQGIKFS-NVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQL 127
           NPNR  GV++D IEV   Y   +F  + ++S FYQG +  + +  +  GQQL+ LD  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 128 AVFTLEQLVDIFSIKVELRLHMRVKIGFIRI-KLNPKVRCGLNLPLISHERSLFRFRIIG 187
                +    I+ I  +LRL +R K G I+  +  PK++C L +PL S+  S F F+   
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTK 226

Query: 188 CFVTY 189
           C V +
Sbjct: 227 CDVDF 231

BLAST of CsaV3_3G037830 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-17
Identity = 57/176 (32.39%), Postives = 99/176 (56.25%), Query Frame = 0

Query: 12  IVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGF 71
           I + V++ ++  ILWL+     +KF V +ANL +F+   ++ L + L LN T++NPN+  
Sbjct: 60  IAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRV 119

Query: 72  GVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQ 131
           GV++D   V+  Y   +F + ++S FYQG +  + +  + +GQ L+ L          ++
Sbjct: 120 GVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDE 179

Query: 132 LVDIFSIKVELRLHMRVKIGFIRI-KLNPKVRC-GLNLPL-ISHERSLFRFRIIGC 185
              I+ I  +LRL +R K  FI+  KL PK++C  L +PL  S+    F+F+ + C
Sbjct: 180 KSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQC 235

BLAST of CsaV3_3G037830 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.0e-14
Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 0

Query: 28  MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI 87
           M  +  +KFQV +A LT F+L  ++ L + LSLN++++N     G+ +D  E  V Y   
Sbjct: 1   MVRSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQ 60

Query: 88  KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR 147
           +   V +  FY G +    L   F+GQ L+ L   +   F  +Q   ++ I V+L ++ R
Sbjct: 61  RLGAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFR 120

Query: 148 VKI-GFIRIKLNPKVRCGLNLPL 170
           V +   +   + P VRC L +PL
Sbjct: 121 VMVLHLVTWPMKPVVRCHLKIPL 143

BLAST of CsaV3_3G037830 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.4e-08
Identity = 48/168 (28.57%), Postives = 85/168 (50.60%), Query Frame = 0

Query: 6   KCIIFTIVIIVLILI----SLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLN 65
           +C  +T   ++L+++    S+ IL+L+   +   + ++   LT+F L  DS L    ++ 
Sbjct: 64  RCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTTAFNVT 123

Query: 66  MTVKNPNRGFGVFF-DSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 125
           +T KNPN   G+++ D  ++ V Y   + SN SL  FYQG E  + +     GQ     +
Sbjct: 124 ITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQ---TQN 183

Query: 126 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKL---NPKVRCGL 166
           A  L     EQ     +I + +R++  V++ F ++KL      VRCG+
Sbjct: 184 ASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGV 228

BLAST of CsaV3_3G037830 vs. ExPASy TrEMBL
Match: A0A5D3DNY5 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004460 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.2e-84
Identity = 167/188 (88.83%), Postives = 178/188 (94.68%), Query Frame = 0

Query: 1   MSRTKKCIIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSL 60
           MSRTKK IIF+I++IVLILISLFILWLMTMTRKLKFQVNNA LT+FNLT+ SQLLFQLSL
Sbjct: 1   MSRTKKFIIFSIIVIVLILISLFILWLMTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSL 60

Query: 61  NMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLD 120
           NM V+NPNRGFGVFFDSIEVAVLYQ IKFSN+SLSPFYQG+EGKS LNFRFDGQQLMNLD
Sbjct: 61  NMMVQNPNRGFGVFFDSIEVAVLYQDIKFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLD 120

Query: 121 AKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRFR 180
           A+QLAVFTLE+LVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPL+SH RS  RFR
Sbjct: 121 AEQLAVFTLEKLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFR 180

Query: 181 IIGCFVTY 189
           IIGCFV Y
Sbjct: 181 IIGCFVAY 188

BLAST of CsaV3_3G037830 vs. ExPASy TrEMBL
Match: A0A0A0LBJ3 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778980 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.9e-83
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0

Query: 28  MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI 87
           MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI
Sbjct: 1   MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI 60

Query: 88  KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR 147
           KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR
Sbjct: 61  KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR 120

Query: 148 VKIGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFVTY 189
           VKIGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFVTY
Sbjct: 121 VKIGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFVTY 161

BLAST of CsaV3_3G037830 vs. ExPASy TrEMBL
Match: A0A5A7TKH6 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001570 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.2e-73
Identity = 144/161 (89.44%), Postives = 152/161 (94.41%), Query Frame = 0

Query: 28  MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI 87
           MTMTRKLKFQVNNA LT+FNLT+ SQLLFQLSLNM V+NPNRGFGVFFDSIEVAVLYQ I
Sbjct: 1   MTMTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDI 60

Query: 88  KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR 147
           KFSN+SLSPFYQG+EGKS LNFRFDGQQLMNLDA+QLAVFTLE+LVDIFSIKVELRLHMR
Sbjct: 61  KFSNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMR 120

Query: 148 VKIGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFVTY 189
           VKIGFIRIKLNPKVRCGLNLPL+SH RS  RFRIIGCFV Y
Sbjct: 121 VKIGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 161

BLAST of CsaV3_3G037830 vs. ExPASy TrEMBL
Match: A0A1S3B7X9 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.5e-72
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0

Query: 30  MTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGIKF 89
           MTRKLKFQVNNA LT+FNLT+ SQLLFQLSLNM V+NPNRGFGVFFDSIEVAVLYQ IKF
Sbjct: 1   MTRKLKFQVNNAKLTKFNLTNGSQLLFQLSLNMMVQNPNRGFGVFFDSIEVAVLYQDIKF 60

Query: 90  SNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMRVK 149
           SN+SLSPFYQG+EGKS LNFRFDGQQLMNLDA+QLAVFTLE+LVDIFSIKVELRLHMRVK
Sbjct: 61  SNMSLSPFYQGEEGKSLLNFRFDGQQLMNLDAEQLAVFTLEKLVDIFSIKVELRLHMRVK 120

Query: 150 IGFIRIKLNPKVRCGLNLPLISHERSLFRFRIIGCFVTY 189
           IGFIRIKLNPKVRCGLNLPL+SH RS  RFRIIGCFV Y
Sbjct: 121 IGFIRIKLNPKVRCGLNLPLVSHGRSFLRFRIIGCFVAY 159

BLAST of CsaV3_3G037830 vs. ExPASy TrEMBL
Match: A0A6J1KYH7 (NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62
Identity = 129/189 (68.25%), Postives = 155/189 (82.01%), Query Frame = 0

Query: 1   MSRTKKC-IIFTIVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLS 60
           MSRTKKC IIF I+I+VL+L+SL I+WL+TM  K+KF V  A+LTQFN TDD+QLLF L+
Sbjct: 1   MSRTKKCMIIFLIIILVLVLLSLLIVWLITMANKIKFHVIGADLTQFNFTDDNQLLFDLT 60

Query: 61  LNMTVKNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNL 120
           +NM VKNPNR FGVFFD IEV +LYQ IKFSN S+SPFYQGQ+G   L  +FDGQQLMNL
Sbjct: 61  VNMKVKNPNRAFGVFFDRIEVTLLYQDIKFSNASMSPFYQGQDGSKLLKLKFDGQQLMNL 120

Query: 121 DAKQLAVFTLEQLVDIFSIKVELRLHMRVKIGFIRIKLNPKVRCGLNLPLISHERSLFRF 180
           +A+QLAVF LE+LV+IF++K+ELRL +RV I  I+IKL PKV CGLNLPLIS  R+  RF
Sbjct: 121 NAEQLAVFGLEKLVEIFTLKLELRLQIRVNIDLIKIKLKPKVHCGLNLPLISRGRTFLRF 180

Query: 181 RIIGCFVTY 189
           +IIGC V Y
Sbjct: 181 QIIGCHVAY 189

BLAST of CsaV3_3G037830 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-22
Identity = 59/161 (36.65%), Postives = 102/161 (63.35%), Query Frame = 0

Query: 12  IVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTD-DSQLLFQLSLNMTVKNPNRG 71
           I +IV++ ++  I WL+   R +KF V +A+LT+F+ T  D+ L + L+L + V+NPN+ 
Sbjct: 46  ISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKR 105

Query: 72  FGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLE 131
            G+++D IE    Y+G +FS ++L+PFYQG +  + L   F GQ L+  +A Q      E
Sbjct: 106 IGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAE 165

Query: 132 QLVDIFSIKVELRLHMRVKIGFIRI-KLNPKVRC-GLNLPL 170
           ++  +++I+++ RL +R K+G ++  ++ PKV C  L LPL
Sbjct: 166 RISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPL 206

BLAST of CsaV3_3G037830 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-22
Identity = 66/185 (35.68%), Postives = 104/185 (56.22%), Query Frame = 0

Query: 8   IIFTIVIIVLIL--ISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVK 67
           +IF I+I + +L  I+  I+WL+     +KF V +A LT+F L   + L + L LN T++
Sbjct: 47  VIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR 106

Query: 68  NPNRGFGVFFDSIEVAVLYQGIKFS-NVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQL 127
           NPNR  GV++D IEV   Y   +F  + ++S FYQG +  + +  +  GQQL+ LD  + 
Sbjct: 107 NPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGER 166

Query: 128 AVFTLEQLVDIFSIKVELRLHMRVKIGFIRI-KLNPKVRCGLNLPLISHERSLFRFRIIG 187
                +    I+ I  +LRL +R K G I+  +  PK++C L +PL S+  S F F+   
Sbjct: 167 KDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTK 226

Query: 188 CFVTY 189
           C V +
Sbjct: 227 CDVDF 231

BLAST of CsaV3_3G037830 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 57/176 (32.39%), Postives = 99/176 (56.25%), Query Frame = 0

Query: 12  IVIIVLILISLFILWLMTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGF 71
           I + V++ ++  ILWL+     +KF V +ANL +F+   ++ L + L LN T++NPN+  
Sbjct: 60  IAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRNPNQRV 119

Query: 72  GVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQ 131
           GV++D   V+  Y   +F + ++S FYQG +  + +  + +GQ L+ L          ++
Sbjct: 120 GVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDE 179

Query: 132 LVDIFSIKVELRLHMRVKIGFIRI-KLNPKVRC-GLNLPL-ISHERSLFRFRIIGC 185
              I+ I  +LRL +R K  FI+  KL PK++C  L +PL  S+    F+F+ + C
Sbjct: 180 KSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQC 235

BLAST of CsaV3_3G037830 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 61/184 (33.15%), Postives = 100/184 (54.35%), Query Frame = 0

Query: 8   IIFTIVIIVLILISL--FILWLMTMTRKLKFQVNNANLTQFNLTDDS-QLLFQLSLNMTV 67
           II  I+I VL+ + +   ILW +     +KFQV  A+LT+F     S  L + +SLN ++
Sbjct: 53  IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI 112

Query: 68  KNPNRGFGVFFDSIEVAVLYQGIKFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQL 127
           +NPN+  G+ +D +EV   Y   +FS  +++ FYQG +  + +    +GQ+L+ L A   
Sbjct: 113 RNPNQRLGIHYDQLEVRGYYGDQRFSAANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGR 172

Query: 128 AVFTLEQLVDIFSIKVELRLHMRVKIGFIRI-KLNPKVRCGLNLPL-ISHERSLFRFRII 187
             F  ++   ++ I V+LR  +R K GF+    + PK++C L +PL  S     F+F   
Sbjct: 173 RDFREDRRSGVYRIDVKLRFKLRFKFGFLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPT 232

BLAST of CsaV3_3G037830 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15
Identity = 45/143 (31.47%), Postives = 74/143 (51.75%), Query Frame = 0

Query: 28  MTMTRKLKFQVNNANLTQFNLTDDSQLLFQLSLNMTVKNPNRGFGVFFDSIEVAVLYQGI 87
           M  +  +KFQV +A LT F+L  ++ L + LSLN++++N     G+ +D  E  V Y   
Sbjct: 1   MVRSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQ 60

Query: 88  KFSNVSLSPFYQGQEGKSSLNFRFDGQQLMNLDAKQLAVFTLEQLVDIFSIKVELRLHMR 147
           +   V +  FY G +    L   F+GQ L+ L   +   F  +Q   ++ I V+L ++ R
Sbjct: 61  RLGAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFR 120

Query: 148 VKI-GFIRIKLNPKVRCGLNLPL 170
           V +   +   + P VRC L +PL
Sbjct: 121 VMVLHLVTWPMKPVVRCHLKIPL 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8651106.15.6e-95100.00hypothetical protein Csa_001623 [Cucumis sativus][more]
XP_004136710.25.2e-93100.00uncharacterized protein LOC101218041 [Cucumis sativus][more]
TYK25308.11.7e-8388.83NDR1/HIN1-Like protein 3-like [Cucumis melo var. makuwa][more]
XP_038904446.16.0e-8187.23NDR1/HIN1-like protein 10 [Benincasa hispida][more]
KAA0043824.14.6e-7389.44NDR1/HIN1-Like protein 3-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9SJ521.5e-2136.65NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
Q9FNH64.3e-2135.68NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1[more]
Q9SRN11.7e-1732.39NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1[more]
Q9C6153.0e-1431.47Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1[more]
Q8LD985.4e-0828.57NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3DNY58.2e-8488.83NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A0A0LBJ36.9e-83100.00LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778980 PE=4 ... [more]
A0A5A7TKH62.2e-7389.44NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A1S3B7X92.5e-7289.31NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103487149 PE=4 SV=1[more]
A0A6J1KYH71.4e-6268.25NDR1/HIN1-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111498716 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G35980.11.0e-2236.65Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT5G06320.13.0e-2235.68NDR1/HIN1-like 3 [more]
AT3G11650.11.2e-1832.39NDR1/HIN1-like 2 [more]
AT2G35460.11.3e-1733.15Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G32270.12.1e-1531.47syntaxin, putative [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 62..163
e-value: 5.9E-11
score: 42.8
IPR044839Protein NDR1-likePANTHERPTHR31415OS05G0367900 PROTEINcoord: 8..180
NoneNo IPR availablePANTHERPTHR31415:SF105LATE EMBRYOGENESIS ABUNDANT PROTEINcoord: 8..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G037830.1CsaV3_3G037830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098542 defense response to other organism