CsaV3_3G037010 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G037010
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	pleiotropic drug resistance protein 2
Location	chr3: 30649422 .. 30656936 (-)
RNA-Seq Expression	CsaV3_3G037010
Synteny	CsaV3_3G037010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAACGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATCATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTCATTTTCTACTTGGGCTCCGCCTTTCCTCCCAATGTTGATACCAAAACACAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAATGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTAGCTCCTATTTTCTACTTGGCTCCGCCTTTCCTCCAACGTTGATACCAAAACAAGAAAGGTATTTCCCACTAGAAACGCTTGCTGCTTTATGCTTCCAGTTAATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTTGATGTTTGTGGAAGAAGTTATGGAACTAATAGAACTAGATAAATTGAGAGATGCTTTAGTGGGGCTACCAGGAATTGATGGTCTTTCAACAGAACAAAGGAAGAGATTGACAATAGCAGTGGAGTTGGTTGCTAATCCGTCGACTATCTTCATGGACGAACCAACTTCTGGTATTGATGCTAGATCTGCTGCCAATTTGTTATGC

mRNA sequence

ATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTTGATGTTTGTGGAAGAAGTTATGGAACTAATAGAACTAGATAAATTGAGAGATGCTTTAGTGGGGCTACCAGGAATTGATGGTCTTTCAACAGAACAAAGGAAGAGATTGACAATAGCAGTGGAGTTGGTTGCTAATCCGTCGACTATCTTCATGGACGAACCAACTTCTGGTATTGATGCTAGATCTGCTGCCAATTTGTTATGC

Coding sequence (CDS)

ATGCAGAATATGGTTGAAGTTTTATTGAATAGCTATTCTACATTGATGTTGATGTTTGTGGAAGAAGTTATGGAACTAATAGAACTAGATAAATTGAGAGATGCTTTAGTGGGGCTACCAGGAATTGATGGTCTTTCAACAGAACAAAGGAAGAGATTGACAATAGCAGTGGAGTTGGTTGCTAATCCGTCGACTATCTTCATGGACGAACCAACTTCTGGTATTGATGCTAGATCTGCTGCCAATTTGTTATGC

Protein sequence

MQNMVEVLLNSYSTLMLMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDARSAANLLC

Homology

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BLAST of CsaV3_3G037010 vs. NCBI nr
Match: KAE8651080.1 (hypothetical protein Csa_001199, partial [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MQNMVEVLLNSYSTLMLMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELV 60
          MQNMVEVLLNSYSTLMLMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELV
Sbjct: 1  MQNMVEVLLNSYSTLMLMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELV 60

Query: 61 ANPSTIFMDEPTSGIDARSAANLLC 86
          ANPSTIFMDEPTSGIDARSAANLLC
Sbjct: 61 ANPSTIFMDEPTSGIDARSAANLLC 85

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BLAST of CsaV3_3G037010 vs. NCBI nr
Match: XP_031737584.1 (ABC transporter G family member 42-like [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 5.7e-31
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 11  SYSTLMLMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDE 70
           SYSTLMLMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDE
Sbjct: 65  SYSTLMLMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDE 124

Query: 71  PTSGIDARSAANLLC 86
           PTSGIDARSAANLLC
Sbjct: 125 PTSGIDARSAANLLC 139

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BLAST of CsaV3_3G037010 vs. NCBI nr
Match: KAE8646165.1 (hypothetical protein Csa_015945 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 6.8e-24
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18  MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
           MFVEEV ELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA
Sbjct: 282 MFVEEVTELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 341

Query: 78  RSAA 82
           RSAA
Sbjct: 342 RSAA 345

[Close]

BLAST of CsaV3_3G037010 vs. NCBI nr
Match: XP_031737941.1 (pleiotropic drug resistance protein 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MFVEEVMELIELDKLRDALVGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 942  MFVEEVMELIELDKLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1001

Query: 78   RSAA 82
            RSAA
Sbjct: 1002 RSAA 1005

[Close]

BLAST of CsaV3_3G037010 vs. NCBI nr
Match: XP_031737940.1 (pleiotropic drug resistance protein 2 isoform X1 [Cucumis sativus] >KGN59266.2 hypothetical protein Csa_001714 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MFVEEVMELIELDKLRDALVGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 942  MFVEEVMELIELDKLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1001

Query: 78   RSAA 82
            RSAA
Sbjct: 1002 RSAA 1005

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BLAST of CsaV3_3G037010 vs. ExPASy Swiss-Prot
Match: A2WSH0 (ABC transporter G family member 36 OS=Oryza sativa subsp. indica OX=39946 GN=ABCG36 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.0e-24
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MF+EEVMEL+EL  LRDALVGLPG++GLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 985  MFIEEVMELVELKSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1044

Query: 78   RSAA 82
            R+AA
Sbjct: 1045 RAAA 1048

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BLAST of CsaV3_3G037010 vs. ExPASy Swiss-Prot
Match: Q0JLC5 (ABC transporter G family member 36 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG36 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.0e-24
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MF+EEVMEL+EL  LRDALVGLPG++GLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 985  MFIEEVMELVELKSLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1044

Query: 78   RSAA 82
            R+AA
Sbjct: 1045 RAAA 1048

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy Swiss-Prot
Match: Q8GU92 (ABC transporter G family member 35 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG35 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 9.2e-24
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MF+EEVMEL+EL  LRDALVGLPG++GLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 992  MFIEEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1051

Query: 78   RSAA 82
            R+AA
Sbjct: 1052 RAAA 1055

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy Swiss-Prot
Match: Q6YW62 (ABC transporter G family member 44 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG44 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-23
Identity = 54/64 (84.38%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MF+E+VMEL+EL+ LRDALVGLPG++GLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 983  MFIEQVMELVELNPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1042

Query: 78   RSAA 82
            R+AA
Sbjct: 1043 RAAA 1046

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy Swiss-Prot
Match: H6WS93 (Pleiotropic drug resistance protein 1 OS=Petunia axillaris OX=33119 GN=PDR1 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.6e-23
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MF+EEVMELIEL  LRDALVGLPG++GLSTEQRKRLT+AVELVANPS IFMDEPTSG+DA
Sbjct: 980  MFIEEVMELIELIPLRDALVGLPGVNGLSTEQRKRLTVAVELVANPSIIFMDEPTSGLDA 1039

Query: 78   RSAA 82
            R+AA
Sbjct: 1040 RAAA 1043

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy TrEMBL
Match: A0A0A0LDZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G774730 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.3e-24
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18  MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
           MFVEEVMELIELDKLRDALVGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 351 MFVEEVMELIELDKLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 410

Query: 78  RSAA 82
           RSAA
Sbjct: 411 RSAA 414

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy TrEMBL
Match: A0A5D3DNP6 (Pleiotropic drug resistance protein 2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003650 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MFVEEVMELIELD+LRDALVGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 958  MFVEEVMELIELDRLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1017

Query: 78   RSAA 82
            RSAA
Sbjct: 1018 RSAA 1021

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy TrEMBL
Match: A0A5A7TKR1 (Pleiotropic drug resistance protein 2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G002420 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18  MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
           MFVEEVMELIELD+LRDALVGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 755 MFVEEVMELIELDRLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 814

Query: 78  RSAA 82
           RSAA
Sbjct: 815 RSAA 818

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy TrEMBL
Match: A0A1S4DUU7 (ABC transporter G family member 34-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486587 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18  MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
           MFVEEVMELIELD+LRDALVGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 852 MFVEEVMELIELDRLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 911

Query: 78  RSAA 82
           RSAA
Sbjct: 912 RSAA 915

[Close]

BLAST of CsaV3_3G037010 vs. ExPASy TrEMBL
Match: A0A1S3B6M1 (pleiotropic drug resistance protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486587 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MFVEEVMELIELD+LRDALVGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 942  MFVEEVMELIELDRLRDALVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1001

Query: 78   RSAA 82
            RSAA
Sbjct: 1002 RSAA 1005

[Close]

BLAST of CsaV3_3G037010 vs. TAIR 10
Match: AT1G59870.1 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24
Identity = 53/65 (81.54%), Postives = 62/65 (95.38%), Query Frame = 0


Query: 17   LMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGID 76
            +MFV++VMEL+ELD LRD++VGLPG+ GLSTEQRKRLTIAVELVANPS IFMDEPTSG+D
Sbjct: 991  MMFVDQVMELVELDSLRDSIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1050

Query: 77   ARSAA 82
            AR+AA
Sbjct: 1051 ARAAA 1055

[Close]

BLAST of CsaV3_3G037010 vs. TAIR 10
Match: AT2G36380.1 (pleiotropic drug resistance 6 )

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-24
Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            MFVEEVMEL+EL  LR+++VGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 977  MFVEEVMELVELKPLRNSIVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1036

Query: 78   RSAA 82
            R+AA
Sbjct: 1037 RAAA 1040

[Close]

BLAST of CsaV3_3G037010 vs. TAIR 10
Match: AT1G66950.1 (pleiotropic drug resistance 11 )

HSP 1 Score: 107.8 bits (268), Expect = 4.2e-24
Identity = 53/64 (82.81%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 18   MFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGIDA 77
            +FVEEVMEL+EL  LR+++VGLPG+DGLSTEQRKRLTIAVELVANPS IFMDEPTSG+DA
Sbjct: 978  LFVEEVMELVELKPLRNSIVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1037

Query: 78   RSAA 82
            R+AA
Sbjct: 1038 RAAA 1041

[Close]

BLAST of CsaV3_3G037010 vs. TAIR 10
Match: AT1G15210.1 (pleiotropic drug resistance 7 )

HSP 1 Score: 107.5 bits (267), Expect = 5.5e-24
Identity = 54/65 (83.08%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 17   LMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGID 76
            LMFV++VMEL+EL  LRDA+VGLPG+ GLSTEQRKRLTIAVELVANPS IFMDEPTSG+D
Sbjct: 964  LMFVDQVMELVELVDLRDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1023

Query: 77   ARSAA 82
            AR+AA
Sbjct: 1024 ARAAA 1028

[Close]

BLAST of CsaV3_3G037010 vs. TAIR 10
Match: AT3G16340.1 (pleiotropic drug resistance 1 )

HSP 1 Score: 106.7 bits (265), Expect = 9.4e-24
Identity = 53/65 (81.54%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 17   LMFVEEVMELIELDKLRDALVGLPGIDGLSTEQRKRLTIAVELVANPSTIFMDEPTSGID 76
            + FV+EVMEL+EL+ L+DA+VGLPGI GLSTEQRKRLTIAVELVANPS IFMDEPTSG+D
Sbjct: 938  MRFVDEVMELVELESLKDAVVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 997

Query: 77   ARSAA 82
            AR+AA
Sbjct: 998  ARAAA 1002

The following BLAST results are available for this feature:

BLAST of CsaV3_3G037010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651080.1	7.7e-36	100.00	hypothetical protein Csa_001199, partial [Cucumis sativus]	[more]
XP_031737584.1	5.7e-31	100.00	ABC transporter G family member 42-like [Cucumis sativus]	[more]
KAE8646165.1	6.8e-24	98.44	hypothetical protein Csa_015945 [Cucumis sativus]	[more]
XP_031737941.1	1.5e-23	95.31	pleiotropic drug resistance protein 2 isoform X2 [Cucumis sativus]	[more]
XP_031737940.1	1.5e-23	95.31	pleiotropic drug resistance protein 2 isoform X1 [Cucumis sativus] >KGN59266.2 h...	[more]

BLAST of CsaV3_3G037010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2WSH0	7.0e-24	85.94	ABC transporter G family member 36 OS=Oryza sativa subsp. indica OX=39946 GN=ABC...	[more]
Q0JLC5	7.0e-24	85.94	ABC transporter G family member 36 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]
Q8GU92	9.2e-24	85.94	ABC transporter G family member 35 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]
Q6YW62	1.2e-23	84.38	ABC transporter G family member 44 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]
H6WS93	1.6e-23	85.94	Pleiotropic drug resistance protein 1 OS=Petunia axillaris OX=33119 GN=PDR1 PE=2...	[more]

BLAST of CsaV3_3G037010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDZ6	7.3e-24	95.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G774730 PE=4 SV=1	[more]
A0A5D3DNP6	1.6e-23	93.75	Pleiotropic drug resistance protein 2-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A5A7TKR1	1.6e-23	93.75	Pleiotropic drug resistance protein 2-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A1S4DUU7	1.6e-23	93.75	ABC transporter G family member 34-like isoform X2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3B6M1	1.6e-23	93.75	pleiotropic drug resistance protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CsaV3_3G037010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59870.1	1.5e-24	81.54	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT2G36380.1	1.9e-24	84.38	pleiotropic drug resistance 6	[more]
AT1G66950.1	4.2e-24	82.81	pleiotropic drug resistance 11	[more]
AT1G15210.1	5.5e-24	83.08	pleiotropic drug resistance 7	[more]
AT3G16340.1	9.4e-24	81.54	pleiotropic drug resistance 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..84 e-value: 5.4E-13 score: 50.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 22..83
None	No IPR available	PANTHER	PTHR48040	PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1	coord: 18..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G037010.1	CsaV3_3G037010.1	mRNA