CsaV3_3G036960 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G036960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RAB6-interacting golgin
Location	chr3: 30581561 .. 30584250 (-)
RNA-Seq Expression	CsaV3_3G036960
Synteny	CsaV3_3G036960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGGCTAGTTTTATTTATTTATTTATTTATTTTTATTAAAGAAAGGAAAAGGATGAAATGTATTAAAAAAAGAATTTCAAACTTTTTTTAGGGAAGAAAATGGTATTTAATAAAAGGAGGAGGCTGGGGGGTGGGCACTTTCAAAAGGCATTTCTATTCTATTCTTAGTTTTTATAAGCACTTAGCAATACCCATAACCCACAAGCTGAAAAGAAAAATTGAAAATACAGCACAAACCCCATCATTCCAAAAGCAAAAGCGAAAGAAGAGAGAGAAAAAGCAACAAACCCAGAAAACACAAAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAATCAGAAGAACAGAGGAATTTTTTTAAGGAAATTCAAAGAAATACGAAACAAGGGTTTTGTGGGTTAACAGGATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGTAAGGAGGGATTTCTTTTCTTTTTTTTTCACAGCATTTTAAGGGTTTTTACCTTTAAATCTTTCATGGGTTTTTCTTAGATTTTGGTTTTTGAGACACGCTTTTAACTTTTCTGCTGTGTTTTACATGAATTTGGTGGGTTTGGGGGAAAAGTTGGGTATAAAATTGTGGAAGATCTCTTCAATATGACTGTAATTTTGAGGGAAATATTTGCTAAAAAGGTCTGAGGACAAGGGGTTCTTAACCCCTTTTGCATGATTTAGTTCTATTATCTATGGGATTTGGGATTAAATTAATGTTTTATCAAGGAATTAGGAGCAGCTTTATGTCAGATTTGTAAGTTTCTTTGTATTATTTTGACTTGCATTCTTAACATATAACCTTTTCTAGACTAATGTCCCATTTTGTATGTGTATTTTCGTTACTTTAGTTACCTGAAAATGAGGCTCTGATCTGAATTTTAGCCTTTTATTTTTGTGTTGTTTTCAAACCTTTTCATGTCAAGGAACAAGAGCAGTTGAAAGAGCTTAAAAAACACCTCATTCCCTTGAGAGAGAAGAGAGATTCTCATTTGCATAGTCTATTTACTCATGAATTCAAGGAGTAGATGATTATGGTGCTAAAACATTATCTACAATGCTTTGATGTTCGTCTGTGGTTGGTTAGTTCAAAGAATCTTTTAGTTCTATGATTAGATTAGGTGGACAAGCAATTAGTAGAAGAAGAGTTTATATGGCAATGTCCAACGATTTATATCAGAAGTAGAAATATGAAGAAATAGTTACAGCAGATACTTTATTCTATGGATAAAGGATGTATTTGATAGAAGAATCGCCGTAAAGATCAACTAGTCAGATTTTTGGTTGTTTTCGAATTGGATTCTGTTTGTTGTTCTTGTTGTTTCGGATAATCAGATGAATTTTACATACACCAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGTGAGATTTGGGGCAAGGAATACCTGTGTGGACAAGCATTGCCTAGCATATAAGATGATGTTGCATTCTGTGAATCTCAATTATTGTACCTTACAATATCAGATAGGACCACTGAGCTGGTTTTCGTATTGTCTGTAATAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGGTAAGTTCCCTTGAGTTCCTTTCGTTCTCCATCATCTGCACGTCAAACGTCATAAATAACCGGGTGATAGGAACCAAATTTTGCACAACTGGAGGCTATTCAATAAATTTTGAACCTTGTTGATTTGGACTCATCAGTTCAGCGATTGAAAAATCTTATCGATTTGGCCTCCATTAGTTGTAAAACTCTTGTTCTCGTCGTGTATTATCATTCGGGTTTCAATTGATGGATTGACTTGTTTTGTTTTTTTGGTGGGCAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAACTGAATTGATTGATTGATTGATTGGAGTGACGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGTGTGATGTATTTAATATAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTTGTGTTTTGGGTGTATTTTTATAATTTGTCCTTGTTTGTTTATTTTTCCTTTAGAGAAGTTACTCAAAAACATTTTAACTGATTTTAGGAAGGGAATTGCCCTATAAACAGGTTTGTAACTCATCTCCCCCTTTCTTTTTCCTTTTCTTCTCTCTTTTTCTCATCAACTTCTCAATCTCTCTCTCAAATTAGAGGAAAAATCCAATTAGTCAAAGCTTAAATATTTGTATGTAGAAACTACTAAATCACCAAAGTTTGTTGATGAATGCTTAATAATAAATCTTCATCTTAACCATTATGATT

mRNA sequence

ATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA

Coding sequence (CDS)

ATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA

Protein sequence

MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR*

Homology

[Close]

BLAST of CsaV3_3G036960 vs. NCBI nr
Match: XP_004137876.1 (GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_000951 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa] >TYK25229.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. NCBI nr
Match: XP_038903091.1 (GRB10-interacting GYF protein 2-like [Benincasa hispida])

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-75
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. NCBI nr
Match: XP_022945279.1 (uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 uncharacterized protein LOC111498737 [Cucurbita maxima] >XP_023539891.1 uncharacterized protein LOC111800435 [Cucurbita pepo subsp. pepo] >KAG6596553.1 hypothetical protein SDJN03_09733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028089.1 hypothetical protein SDJN02_09269 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. NCBI nr
Match: XP_022144720.1 (uncharacterized protein LOC111014340 [Momordica charantia])

HSP 1 Score: 275.4 bits (703), Expect = 3.3e-70
Identity = 158/167 (94.61%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ E  Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQTE--QPQQQLMVQNNQGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           K+AL+AFN+KNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KDALDAFNEKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 165

[Close]

BLAST of CsaV3_3G036960 vs. ExPASy TrEMBL
Match: A0A0A0LGI7 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.6e-77
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. ExPASy TrEMBL
Match: A0A5D3DPH8 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003590 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. ExPASy TrEMBL
Match: A0A1S3B6L6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. ExPASy TrEMBL
Match: A0A6J1KYK3 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. ExPASy TrEMBL
Match: A0A6J1G0J9 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74
Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of CsaV3_3G036960 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 125/149 (83.89%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 18  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 77
           +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA I
Sbjct: 29  SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALI 88

Query: 78  REELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQL 137
           REELE LADPMRKEVA VRKKID+VNKELKPLGHT QKKE+EYKEALEAFN+KN+EKVQL
Sbjct: 89  REELEGLADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQL 148

Query: 138 ITKLMELVSESERLRLKKLEELSKNIDTI 167
           IT+LMELV ESE++R+KKLEELSKNID+I
Sbjct: 149 ITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of CsaV3_3G036960 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 219.2 bits (557), Expect = 2.6e-57
Identity = 121/165 (73.33%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNKELKPLG T QKKE+EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYK 147

Query: 122 EALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
           EAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Sbjct: 148 EALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of CsaV3_3G036960 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 215.3 bits (547), Expect = 3.7e-56
Identity = 120/165 (72.73%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNKELKPLG T QKK  EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYK 147

Query: 122 EALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
           EAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Sbjct: 148 EALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of CsaV3_3G036960 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55
Identity = 121/168 (72.02%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRKKID+VNKELKPLG T QKKE+EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYK 147

Query: 122 EALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI 167
           EAL+ FN+KN+EKVQLITKLME   LV ESE+LR+ KLEELSK+I+T+
Sbjct: 148 EALDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSIETV 195

[Close]

BLAST of CsaV3_3G036960 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-54
Identity = 121/159 (76.10%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 7   QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGR 66
           Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGR
Sbjct: 10  QPPQQMM------SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGR 69

Query: 67  VEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEA 126
           VEEET+RLA IREELE +ADPMRKEV  VRKKID+VNKELKPLG T QKKE+EYKEAL+ 
Sbjct: 70  VEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDT 129

Query: 127 FNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT 166
           FN+KN+EKVQLITKLMELV ESE+LRLKKL+ELS++IDT
Sbjct: 130 FNEKNREKVQLITKLMELVGESEKLRLKKLDELSRSIDT 162

The following BLAST results are available for this feature:

BLAST of CsaV3_3G036960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137876.1	1.4e-76	100.00	GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical prote...	[more]
XP_008442808.1	3.0e-76	99.40	PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 put...	[more]
XP_038903091.1	1.2e-75	99.40	GRB10-interacting GYF protein 2-like [Benincasa hispida]	[more]
XP_022945279.1	2.8e-74	97.01	uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 unchar...	[more]
XP_022144720.1	3.3e-70	94.61	uncharacterized protein LOC111014340 [Momordica charantia]	[more]

BLAST of CsaV3_3G036960 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G036960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGI7	6.6e-77	100.00	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1	[more]
A0A5D3DPH8	1.5e-76	99.40	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6L6	1.5e-76	99.40	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1	[more]
A0A6J1KYK3	1.4e-74	97.01	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1	[more]
A0A6J1G0J9	1.4e-74	97.01	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1	[more]

BLAST of CsaV3_3G036960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	1.1e-60	83.89	Family of unknown function (DUF662)	[more]
AT2G36410.2	2.6e-57	73.33	Family of unknown function (DUF662)	[more]
AT2G36410.3	3.7e-56	72.73	Family of unknown function (DUF662)	[more]
AT2G36410.1	1.1e-55	72.02	Family of unknown function (DUF662)	[more]
AT3G52920.2	1.2e-54	76.10	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..51
None	No IPR available	PANTHER	PTHR21470:SF8	EXPRESSED PROTEIN	coord: 12..166
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 18..165 e-value: 1.5E-75 score: 252.3
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 12..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G036960.1	CsaV3_3G036960.1	mRNA