CsaV3_3G036760 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G036760
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	histone deacetylase HDT1
Location	chr3: 30449522 .. 30454715 (-)
RNA-Seq Expression	CsaV3_3G036760
Synteny	CsaV3_3G036760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCAACAAAATCATATTTTGAGAAGTGATTCATAGTTAATTACGTATTAAAAGAAAGGGTGTGGAGAAATTGCGGTGTTACGCGCAACACTTGATCGTCTACAAAAACTCCATCTCCGCTTCTTCCCCATTTCATTTCATAAAGACATAAACTCACAATTCTCTTAATCACACAACACACTTTTTGCCATTTGCGAATTCAATCCTTCGTCTTCGTTCACATAACAAAAGAAAAAAGCAAAAACCCTAAACCTTCGACTTCCCACTGATCTCTGCTCTTCACCAATGGAGTTTTGGGGTAACTTTCTCTCTTCCCTTTCCCCTCCCCCCTCTTTCTTCAGTATTTATGCTTCTTCGTCATTGGCGCCTCTTTAGGTATTCATACGGTAGAAAAACAGTAGAACAGTGCATTAGCTTAAGCATCGGGTAGGTTTTTTCATCTTCTTCCTAGAAGTGTCTGGGTCTCGGTTACCTGTTCATGCTGCAGTGTGCTTTTGCTATCATATATTTGTTAATGCCGTCTTTGCATTTCGTTGCTAAGTGAAATATAGGAGCAAATTCGGTTTTAACTGATATTGTGTTTTATTAAGTTCGTCCCAGTTGAATTTTTAATGTATCTGGCGTGAATTTGAATGTTACGATACTGAATGGAAACAGTACTTGAACAATTGTAGAGTCGCTTCTTTTTACAGATACGTGATCTTGAACTTGGGTTGTTTGAATTTTGACGTGCATGGTTAATTTACATGGGTTCTGTGTTTAAGATTGCTTATGTGCAGCCGTTTTGGTAATCTCTCTTATTTTGGCTAATTCACGAGTTTCTACTTGATCTTATCATGTGCGCGCGTGTGTTTTGAACTAATAGTTTGGGAAAAAGGATTATTGCCTGATGATTTCGAACTTTCCAAATTGTTCTTAATTGTTTGTTGTTAATAACTATCTTGCTGGAGATGAGGGATCAAGAAAACAATTTCTGCTGGAAACCAAGAGTTGTTTTATATGTTGGAAGTATGACTTGGTTCTATTACATGTCTACTAACTTAATTGAAGCATGTTAGTATACGGTCAATTATGTTGTGATTCTATGTTTTTCCTAAAATTAGTGTTATTGTTATGTTTTGCAGGTGCTGAGGTTAAAGTTGGAGAACCTCTCTTGGTGAGTCCTGGAGAGGAGAAGATACTGCATCTGTCGCAGGTATCATTTGTGCTAATTTGTTGATCTGTTCTTAAGAAATCTGTAGGGCAGTAGTTGAGTTATGTATTCTCCACAGGCCTGTCTTGGAGAGTCCAAGAGCAAAGGAAGTGAACCGGTTGTCCTATATGTCAAGGTTGGCAATCAAAAGCTTGTTCTGGGGACACTATCCTCGGAGAAATTCCCACAAGTGTCTTTTGATCTTGTGTTTGACAAAGAATTTGAGCTATCTCATAATTGGAAAAACGGAAGTGTGCACTTTACAGGATATACATCTCTCCTTCCAGAAGAATATCCTTTATCTGAATTCTTAAGGCTCTTCTCGATTTTGGTTTTTGGTTTTTTATTTTTGAAAATTAAGCTTATAAATATTACTTCTATACATCAATTTTAATGTATGGTTATCCCTTCAAAGTTTCGACTAGTGTTTTCAAGTACCTAGCCAAGTTTTGTTTTTGTTTTTAGATTTTGAATAGGAAGCAGGAGCTCGAGTTTTTCTTTAAGAAAGGTGAAACCCCTAATTGAGAAATTAGGAAGAAACAAGCATAAATTTAATAAACAAAATTCTAAAGACGAAATTATTGTCAAGCGGGGCCTAAATCATTTTAGTTTTATTTTTTAAACTTATTTTCATACTATTTTGTTTAATTGCTTGATTTGCATTTTCTATGTTGTTTTCTTGACTAGTTTGAGTTTTTTCCATTTCCACGGAGGAATCTACTTGTAAGTTGTTTCTCAACTTGCTGTCATTAGTACTTCCTTTTTATTTCTTTTAAACCAATGATTAAGTGTTCTGGATTGCTATTTTTCAATTTCAGATACTGATTCTGAAGAGGATTTTCCTCTAGCTGTCACGGACAATGGTGATGTTTACTCTCTAGACTTTCTTGTACATGTGTCATTTAACTAAACTTAGTGACATAGGCTATTATACTTTGGTGCAGGAAAGCCAGAGCCAGAGCCAGAGCCTAAGAAAGATGCAAAGCCTGATACTTCTGGAACCAAGAAAAAAGTGCAGATTGTAGAACCAAGCAAAGTTGCCTCTAATTCAAATATTGACAGTAAGAAGAATAAAGACAGTTCTGATGAAGATGATGACGAGGATGAGGAGAGCACAGATAATGAGGTACTCTTAGATGCCATTTTACATTATACTTCCAAGTGTGAAAATTTATTTTTGAAAGAAGATTCATGACAAGGAAGGGAGCAAACTTAATTAATTTAGCTCTCCTCATTTTCTTTGTTCGTGGCAATATAACGGCCTAAAATCAACAGCATTTTGGCAGAATAGGGTAAATTACCGGTCAATAATTCCTTCACATCCAAACCATATTAATAGTGTAAATTATTTAGAAAAACTTGCTGCATGGGTCCTCTTTTTCTACAAAATAATAGTAGTATAGCTAACTTATTAAAAACAACTTGCTACTTGCTACTATCCGGGTCCTCTCTTTTCACAAATTTGGTATATTCCTTTACGTGGAGGCAAACATCATACCTCCAAGCACCGACAGATTTAGTATAGGCCCGACGGGCCGGCCCCCCCTCAACTTTATTGTCTTTATATGATATGTATAAACAAAATTAATTAATGTTCAATATTTGTAGGAAGTTTAGTGGTAACTATGCTTGTCAGCCCCTCTTCCATCCAAAGTTCAAGTCTTCTCTATGTAATTTTTTTTCCAGATTTTTATTTTTTCTCTAAGTTACAACTCGAAGCCCCCCTGTCAATAAATTTTTTGGATCCACCACTGCCTCCAAGACAGGTCACTGGTTCTCGGCACCATACACAGTAGAGCTCCATGCCTTCCATGGCGAGAAATTTTTAAATCTTGATTGAATTTGGCTGTTCTTAAAACAATTTTATTTTATGCTTCTAATTTTTGGGGTTGCATTAATTTGAAACCCAAATAATAGTATTTTCAATTTTAGAAACCCAATAATAATATTATCAATTTTAGAAACCCAAATAATAATATTATCAATTTACTTTCATAAGTTAATCAATTTAAACCTTCCCATTTATAACTTTTCACCTCATGTCAAGTGTGATAATTTGACGTCTTTCAATATTTACCATGTACAATGGTCATAAATATAATCACTGGAGCATTGTTCGTTCTGAGCTACTTGATATTAGCAATGATCTGAAGCATATGAGGAAATTTTGTACCATAATATTTACTCTACCAATATGGCCAATTAATTTCAACTTTCTTCATCTTCATTTGTTTCCTTTAGAATGAAAATGGAGGTGAAGAAGATGATAGCGATGATGATGAAAATGAGTCTTCTGGAGTCGATAGTGAAGACTCTGATGAGGACTCGGATGACAGTTTGGAAGAGGATGAGCAGACACCAAAAAAGGTATGAGGCTGCCATCTTTCCCTCATTGTTATTATTACTTTTGGGTAAGAAACCAAATTTTAATGGTGAGAAATGAAGTCAATTGATTGGGTTAAGTTAGATATTCTTTTCCTTTATTTGCTATTTCTTAATCAAATAATTATTGAAACCATTGAAGGCTGAAGCAAGCAAGAAGAGACCTTTAGATTCTGCTAATAAAACGCCTGCTCCCGATAAGAAGGCAAAACTCGTCACTCCTCAGAAAACTGGTTTGTTTCTTCTCTATTGCCCCTTTATATTGCTACTGTAGATGTGAAGTTGACCTGTGTTTCTTATCATATTAGTACTTTTTGCTTGGAATTCATGTTGTTTCATTCTTGTACGGTTGGGGATGGACTTCAAATTCTTGAACTCTTAAACAAATTGCTAAGATGGGGTTTTGTATTTTAAATTTTGAATTTGATTTTTCTTTGTGTATATATATATATTATATATATATAATTTTGCAGATGGCAAGAAAGGGGTTGCTCATGTAGCTACTCCTCATCCTTCAAAGAAGGCCGGGAAAATGGCCGCTGCTAATGACAAAAATAAACAGCAGACTCCCAAATCAGCAAATGCCGCATTCTCTTGCAAAACTTGCAACAGGTAACTCATGCTGCCTATTTTCCTAACTCCATGGAGAGAATTAAGATTGTTAACAACTTCAATTTAATAGTGAAAATAAACTTTAATTGAAGGACATTCGGCTCAGAAACTGCGTTACAATCCCACACAAAAGCCAAGCACACAGCCGATAAGTGATCAGGTTATTGTTTTAGGAGGAATATGGTGCATGGATCAGCTCAACCTGACCAGTATATCAAATCAGAATCACGATACTGGATGGTTGTGAATTTTCTACCCCCATCCTTTTGAGGTTCATTTTCTAAATATTCAGGTGTGATTTCAAATCTTATTACTATCGTAAGCTCTAGTTACTTGTGAATGGCTCGTTTTGGACGTTGTGTGTGCTGTAGAATTTTTTTAGATCCAGTAGAATATTGTTTAATATTACTTAGCTGGAGCCTGGAGTTATCTTTATTATTATTGCCTTCTCTCCTGTCTTTTTTTCCTTTTATTTTTGGGTTGACATTGGACATGAAAGATGAAGAAGATGAAATAACCATTAGCTCTTGGTCTTGGTTAACTTGTTGACAACTTTGTTGATAGAAAGCTGGGTAGTTTTATCTGGTTAATTTTCTTAGGTGTTGTTTGGAAGATAGGGGGGCTTTTGAAGACCGGTAACATTACCGGAATGGTTAGTAACATGGTATCGAAGGATGTCATGTTCAAACCGGTTTTTAGTGTCATTTCTTCTTCGATTAACAATGATTCACCTGTTGGATATTCTACAAATTTTTAATTGGTTCAAGTGTTTGGGTCAACTAGTGATTTAACTAGAATCAAGTAAAAGTCATTCTCAATTTTGACTAACCGAATACATTTGTATATTTTGTTTTTAAAATTTAAAGAACGTTGAGAACTCTTGAACTTTGTCTAACCACGCTCTCTCAACTTTGTCTTCATCTTCTTGGGCCTACGAGGTTCTGGGAAATTTGTAGTCTTTCTGTTGTTTGCATGTTTTCTTTCAAAAATAAATTAAAAGGAATGATC

mRNA sequence

ATGGAGTTTTGGGGTGCTGAGGTTAAAGTTGGAGAACCTCTCTTGGTGAGTCCTGGAGAGGAGAAGATACTGCATCTGTCGCAGGCCTGTCTTGGAGAGTCCAAGAGCAAAGGAAGTGAACCGGTTGTCCTATATGTCAAGGTTGGCAATCAAAAGCTTGTTCTGGGGACACTATCCTCGGAGAAATTCCCACAAGTGTCTTTTGATCTTGTGTTTGACAAAGAATTTGAGCTATCTCATAATTGGAAAAACGGAAGTGTGCACTTTACAGGATATACATCTCTCCTTCCAGAAGAGGAGGAATCTACTTATACTGATTCTGAAGAGGATTTTCCTCTAGCTGTCACGGACAATGGAAAGCCAGAGCCAGAGCCAGAGCCTAAGAAAGATGCAAAGCCTGATACTTCTGGAACCAAGAAAAAAGTGCAGATTGTAGAACCAAGCAAAGTTGCCTCTAATTCAAATATTGACAGTAAGAAGAATAAAGACAGTTCTGATGAAGATGATGACGAGGATGAGGAGAGCACAGATAATGAGAATGAAAATGGAGGTGAAGAAGATGATAGCGATGATGATGAAAATGAGTCTTCTGGAGTCGATAGTGAAGACTCTGATGAGGACTCGGATGACAGTTTGGAAGAGGATGAGCAGACACCAAAAAAGGCTGAAGCAAGCAAGAAGAGACCTTTAGATTCTGCTAATAAAACGCCTGCTCCCGATAAGAAGGCAAAACTCGTCACTCCTCAGAAAACTGATGGCAAGAAAGGGGTTGCTCATGTAGCTACTCCTCATCCTTCAAAGAAGGCCGGGAAAATGGCCGCTGCTAATGACAAAAATAAACAGCAGACTCCCAAATCAGCAAATGCCGCATTCTCTTGCAAAACTTGCAACAGGACATTCGGCTCAGAAACTGCGTTACAATCCCACACAAAAGCCAAGCACACAGCCGATAAGTGA

Coding sequence (CDS)

ATGGAGTTTTGGGGTGCTGAGGTTAAAGTTGGAGAACCTCTCTTGGTGAGTCCTGGAGAGGAGAAGATACTGCATCTGTCGCAGGCCTGTCTTGGAGAGTCCAAGAGCAAAGGAAGTGAACCGGTTGTCCTATATGTCAAGGTTGGCAATCAAAAGCTTGTTCTGGGGACACTATCCTCGGAGAAATTCCCACAAGTGTCTTTTGATCTTGTGTTTGACAAAGAATTTGAGCTATCTCATAATTGGAAAAACGGAAGTGTGCACTTTACAGGATATACATCTCTCCTTCCAGAAGAGGAGGAATCTACTTATACTGATTCTGAAGAGGATTTTCCTCTAGCTGTCACGGACAATGGAAAGCCAGAGCCAGAGCCAGAGCCTAAGAAAGATGCAAAGCCTGATACTTCTGGAACCAAGAAAAAAGTGCAGATTGTAGAACCAAGCAAAGTTGCCTCTAATTCAAATATTGACAGTAAGAAGAATAAAGACAGTTCTGATGAAGATGATGACGAGGATGAGGAGAGCACAGATAATGAGAATGAAAATGGAGGTGAAGAAGATGATAGCGATGATGATGAAAATGAGTCTTCTGGAGTCGATAGTGAAGACTCTGATGAGGACTCGGATGACAGTTTGGAAGAGGATGAGCAGACACCAAAAAAGGCTGAAGCAAGCAAGAAGAGACCTTTAGATTCTGCTAATAAAACGCCTGCTCCCGATAAGAAGGCAAAACTCGTCACTCCTCAGAAAACTGATGGCAAGAAAGGGGTTGCTCATGTAGCTACTCCTCATCCTTCAAAGAAGGCCGGGAAAATGGCCGCTGCTAATGACAAAAATAAACAGCAGACTCCCAAATCAGCAAATGCCGCATTCTCTTGCAAAACTTGCAACAGGACATTCGGCTCAGAAACTGCGTTACAATCCCACACAAAAGCCAAGCACACAGCCGATAAGTGA

Protein sequence

MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSSEKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGKPEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNENENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTFGSETALQSHTKAKHTADK*

Homology

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BLAST of CsaV3_3G036760 vs. NCBI nr
Match: XP_004137868.1 (histone deacetylase HDT1 isoform X1 [Cucumis sativus] >KGN59052.1 hypothetical protein Csa_001679 [Cucumis sativus])

HSP 1 Score: 580.1 bits (1494), Expect = 1.2e-161
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
           PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN
Sbjct: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
           ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD
Sbjct: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240

Query: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF 300
           KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF
Sbjct: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF 300

Query: 301 GSETALQSHTKAKHTADK 319
           GSETALQSHTKAKHTADK
Sbjct: 301 GSETALQSHTKAKHTADK 318

[Close]

BLAST of CsaV3_3G036760 vs. NCBI nr
Match: XP_008442794.1 (PREDICTED: histone deacetylase HDT1 [Cucumis melo])

HSP 1 Score: 552.0 bits (1421), Expect = 3.4e-153
Identity = 306/318 (96.23%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSE V LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
             PEPEPKKDAKPDTSGTKKKVQIVEP+KVASNSNIDSKKN+DSSDEDDDEDEESTD+EN
Sbjct: 121 --PEPEPKKDAKPDTSGTKKKVQIVEPNKVASNSNIDSKKNEDSSDEDDDEDEESTDDEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
           ENGGEEDD+DDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD
Sbjct: 181 ENGGEEDDTDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240

Query: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF 300
           KKAKLVTPQKTDGKKGVAHV TPHPSKKAGKM AANDK KQQTPKSANAAF CKTCNRTF
Sbjct: 241 KKAKLVTPQKTDGKKGVAHVDTPHPSKKAGKMPAANDKTKQQTPKSANAAFPCKTCNRTF 300

Query: 301 GSETALQSHTKAKHTADK 319
           GSETALQSHTKAKHTADK
Sbjct: 301 GSETALQSHTKAKHTADK 316

[Close]

BLAST of CsaV3_3G036760 vs. NCBI nr
Match: XP_031738351.1 (histone deacetylase HDT1 isoform X2 [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 1.8e-149
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
           PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN
Sbjct: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
           ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD
Sbjct: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240

Query: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCN 298
           KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCN
Sbjct: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCN 297

[Close]

BLAST of CsaV3_3G036760 vs. NCBI nr
Match: XP_038905525.1 (histone deacetylase HDT1 [Benincasa hispida])

HSP 1 Score: 505.4 bits (1300), Expect = 3.7e-139
Identity = 285/318 (89.62%), Postives = 293/318 (92.14%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEEK+LHLSQACLGESK+KGSE V LYVKVGNQKLVLG LSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEEKLLHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGILSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTS LPEEEES+YTDSEE FPLA  DNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSFLPEEEESSYTDSEEGFPLAAIDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
              E E KKDAKPDTSGTKKKVQIVEP+K  SNS IDSKKNKDSSDEDDDEDEESTD+EN
Sbjct: 121 --QELETKKDAKPDTSGTKKKVQIVEPNKGGSNSIIDSKKNKDSSDEDDDEDEESTDDEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
            N GEEDD+DDDENE SGVDSEDSDE+SDDSLEEDEQTPKKAEASKKRPLDSANKT APD
Sbjct: 181 ANEGEEDDTDDDENEFSGVDSEDSDEESDDSLEEDEQTPKKAEASKKRPLDSANKTAAPD 240

Query: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF 300
           KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKM AANDKNKQQTPKSA  AF CKTCNRTF
Sbjct: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMPAANDKNKQQTPKSAGGAFPCKTCNRTF 300

Query: 301 GSETALQSHTKAKHTADK 319
           GSETAL SHTKAKHTA+K
Sbjct: 301 GSETALHSHTKAKHTAEK 316

[Close]

BLAST of CsaV3_3G036760 vs. NCBI nr
Match: XP_022144751.1 (histone deacetylase HDT1 [Momordica charantia])

HSP 1 Score: 473.4 bits (1217), Expect = 1.5e-129
Identity = 267/319 (83.70%), Postives = 288/319 (90.28%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGES+ KGSEPV LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSV+FTGYTSLLPEEEES+YTDSEED P+A  DNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVYFTGYTSLLPEEEESSYTDSEEDIPVAAVDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
             PE +PKKDAKPD SG+K+KVQIVEP+K  SNS IDSKKN D+SDEDDDEDE+S D+EN
Sbjct: 121 --PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSD-EDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAP 240
            NGGEEDD+DDDENE SG DS+ +D E+SDDSL EDEQTPKKAEASKKRPL+SANKTPA 
Sbjct: 181 ANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAA 240

Query: 241 DKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRT 300
           DKKAKLVTPQKTDGKK V HVATPHPSK+AGK  AAND+NKQQTPKSA  AF CK+C R 
Sbjct: 241 DKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRA 300

Query: 301 FGSETALQSHTKAKHTADK 319
           FGSE ALQSHTKAKH+A+K
Sbjct: 301 FGSEGALQSHTKAKHSAEK 317

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy Swiss-Prot
Match: Q6V9I6 (Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-68
Identity = 168/322 (52.17%), Postives = 205/322 (63.66%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPL V PG+  +LHLSQA LGE K   SE V L V +  +KLVLGTL+S
Sbjct: 1   MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLP----EEEESTYTDSEEDFPLAVT 120
           EK PQ  FDLVFD++FELSHN K+GSV+F GY +  P    E++E  Y +S+ED PL + 
Sbjct: 61  EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTLA 120

Query: 121 DNGKPEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEEST 180
           ++GKPEP+   K +A  D++  K+KV+IVEP+K                   DDEDE S 
Sbjct: 121 NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTK-------------------DDEDESSD 180

Query: 181 DNENENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKT 240
           D++++ G +EDDSDD E                      E+TPKKAE +K+R  DSA KT
Sbjct: 181 DDDSDMGEDEDDSDDSE----------------------EETPKKAEPAKRRKADSATKT 240

Query: 241 PAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTC 300
           P  DKKAKL TPQKTDGKKG  HVATPHPSK+A K           TPKSA  +  CK C
Sbjct: 241 PVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASK-----------TPKSA-GSHHCKPC 269

Query: 301 NRTFGSETALQSHTKAKHTADK 319
           NR+FGSE AL SH+KAKH+A K
Sbjct: 301 NRSFGSEGALDSHSKAKHSAGK 269

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy Swiss-Prot
Match: Q9LZR5 (Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 1.9e-50
Identity = 148/325 (45.54%), Postives = 197/325 (60.62%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+PL + PG ++++H+SQ  LGESK+  +EP+ LYV VG+ KL++GTLS 
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQ+S ++V ++ F LSH WKNGSV F+GY             D+             
Sbjct: 61  EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYK-----------VDAS------------ 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNI----DSKKNKDSSDEDDDEDEEST 180
            +PEPE   D + + +G K       P   A   N     +  K K   D D  E++ S 
Sbjct: 121 -DPEPEDLIDDQLEAAGFK-----AAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSD 180

Query: 181 DNENENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLD-SANK 240
           D+++EN G+E++ +    ES   + + SD++ DDS E  E+TPKK E  KKR  + +++K
Sbjct: 181 DDDSENSGDEEE-EKVTAESDSEEDDSSDDEEDDSSE--EETPKKPEEPKKRSAEPNSSK 240

Query: 241 TPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAAND----KNKQQTPKSANAAF 300
            PA +KKAK VTPQKTD KK   HVATPHPSK+AGK +          +QQTPKSA  AF
Sbjct: 241 NPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSA-GAF 292

Query: 301 SCKTCNRTFGSETALQSHTKAKHTA 317
            CK+C RTF SE  LQSHTKAKH+A
Sbjct: 301 GCKSCTRTFTSEMGLQSHTKAKHSA 292

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy Swiss-Prot
Match: Q9M4U5 (Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.8e-48
Identity = 148/323 (45.82%), Postives = 199/323 (61.61%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   ILH+SQA LGESK   S+  ++YVKV ++KL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK--SDSALMYVKVDDKKLAIGTLSI 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEED-----FPLAV 120
           +K+PQ+ FDLVF+KEFELSH  K  SV F+GY    P E +    DSE++      P+ +
Sbjct: 61  DKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDLDSEDEEEELNIPV-I 120

Query: 121 TDNGKPEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEES 180
            +NGK + + E K   K   +   K           S+  ++ K   DS D D+DE ++S
Sbjct: 121 KENGKADGKEEQKNQEKAVAATASK-----------SSLGLEKKSKDDSDDSDEDESDDS 180

Query: 181 TDNENENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANK 240
            ++++++  E +    DE +    DS D D+ SDD  EE+  TPKK EA KKR  ++A K
Sbjct: 181 DEDDSDDSDEGEGLSPDEGDD---DSSDEDDTSDDD-EEETPTPKKPEAGKKRGAENALK 240

Query: 241 TPAPDKKAKLVTP--QKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSC 300
           TP  DKKAK+ TP  QKT GKKG  HVATPHP+K  GK  A NDK  +++PKS  +   C
Sbjct: 241 TPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKSGGSV-PC 300

Query: 301 KTCNRTFGSETALQSHTKAKHTA 317
           K+C++TF SE ALQ+H+KAKH A
Sbjct: 301 KSCSKTFNSEMALQAHSKAKHGA 302

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy Swiss-Prot
Match: Q9M4U4 (Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.3e-48
Identity = 152/319 (47.65%), Postives = 193/319 (60.50%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   +LHLSQA LGESK   S+  ++YVK+ +QKL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK--SDNALMYVKIDDQKLAIGTLSV 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSE-EDFPLAVTDNG 120
           +K P + FDL+FDKEFELSH  K  SV FTGY    P EE+    DSE ED  L V    
Sbjct: 61  DKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNV---- 120

Query: 121 KPEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNE 180
                P  K++ K D    K + + V      S S+ DSKK+KD    DDD DE+ TD+ 
Sbjct: 121 -----PAVKENGKADEKKQKSQEKAV---AAPSKSSPDSKKSKD----DDDSDEDETDDS 180

Query: 181 NENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSA-NKTPA 240
           +E+  E DDSD+  +   G D    ++D+ D  EED  TPKK E  KKR  +S+  KTP 
Sbjct: 181 DED--ETDDSDEGLSPEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPL 240

Query: 241 PDKKAKLVTP--QKTDGKKGVA-HVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKT 300
            DKKAK+ TP  QKT GKKG A HVATPHP+K  GK    NDK+ +    +  +   CK+
Sbjct: 241 SDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSGVPCKS 297

Query: 301 CNRTFGSETALQSHTKAKH 315
           C+++F SETA Q+H+KAKH
Sbjct: 301 CSKSFISETAPQAHSKAKH 297

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy Swiss-Prot
Match: O24591 (Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.9e-48
Identity = 157/326 (48.16%), Postives = 199/326 (61.04%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G  +   PG   +LHLSQA LGESK   S+  ++YVK+ +QKL +GTLS 
Sbjct: 1   MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKK--SDNALMYVKIDDQKLAIGTLSV 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSE-EDFPLAVTDNG 120
           +K P + FDL+FDKEFELSH  K  SV FTGY    P EE+    DSE ED  L V    
Sbjct: 61  DKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNV---- 120

Query: 121 KPEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNE 180
                P  K++ K D    K + + V      S S+ DSKK+KD    DDD DE+ TD+ 
Sbjct: 121 -----PVVKENGKADEKKQKSQEKAV---AAPSKSSPDSKKSKD----DDDSDEDETDDS 180

Query: 181 NENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSA-NKTPA 240
           +E+  E DDSD+  +   G D    ++D+ D  EED  TPKK E  KKRP +S+  KTP 
Sbjct: 181 DED--ETDDSDEGLSSEEGDDDSSDEDDTSDDEEEDTPTPKKPEVGKKRPAESSVLKTPL 240

Query: 241 PDKKAKLVTP--QKTDGKKGVA-HVATPHPSKKAGKMAAANDKNKQQTPKSA---NAAFS 300
            DKKAK+ TP  QKT GKKG A HVATPHP+K  GK    NDK+  ++PKSA     +  
Sbjct: 241 SDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKS-VKSPKSAPKSGGSVP 300

Query: 301 CKTCNRTFGSETALQSHTKAKHTADK 319
           CK C+++F SETALQ+H++AK  A +
Sbjct: 301 CKPCSKSFISETALQAHSRAKMGASE 303

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy TrEMBL
Match: A0A0A0LEE5 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 5.7e-162
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
           PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN
Sbjct: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
           ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD
Sbjct: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240

Query: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF 300
           KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF
Sbjct: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF 300

Query: 301 GSETALQSHTKAKHTADK 319
           GSETALQSHTKAKHTADK
Sbjct: 301 GSETALQSHTKAKHTADK 318

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy TrEMBL
Match: A0A1S3B626 (histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.7e-153
Identity = 306/318 (96.23%), Postives = 310/318 (97.48%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSE V LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
             PEPEPKKDAKPDTSGTKKKVQIVEP+KVASNSNIDSKKN+DSSDEDDDEDEESTD+EN
Sbjct: 121 --PEPEPKKDAKPDTSGTKKKVQIVEPNKVASNSNIDSKKNEDSSDEDDDEDEESTDDEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
           ENGGEEDD+DDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD
Sbjct: 181 ENGGEEDDTDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240

Query: 241 KKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRTF 300
           KKAKLVTPQKTDGKKGVAHV TPHPSKKAGKM AANDK KQQTPKSANAAF CKTCNRTF
Sbjct: 241 KKAKLVTPQKTDGKKGVAHVDTPHPSKKAGKMPAANDKTKQQTPKSANAAFPCKTCNRTF 300

Query: 301 GSETALQSHTKAKHTADK 319
           GSETALQSHTKAKHTADK
Sbjct: 301 GSETALQSHTKAKHTADK 316

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy TrEMBL
Match: A0A6J1CUC4 (histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 7.5e-130
Identity = 267/319 (83.70%), Postives = 288/319 (90.28%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGES+ KGSEPV LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESRGKGSEPVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDKEFELSHNWKNGSV+FTGYTSLLPEEEES+YTDSEED P+A  DNGK
Sbjct: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVYFTGYTSLLPEEEESSYTDSEEDIPVAAVDNGK 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
             PE +PKKDAKPD SG+K+KVQIVEP+K  SNS IDSKKN D+SDEDDDEDE+S D+EN
Sbjct: 121 --PEAQPKKDAKPDASGSKRKVQIVEPNKSGSNSIIDSKKNDDTSDEDDDEDEDSLDDEN 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSD-EDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAP 240
            NGGEEDD+DDDENE SG DS+ +D E+SDDSL EDEQTPKKAEASKKRPL+SANKTPA 
Sbjct: 181 ANGGEEDDTDDDENEFSGDDSDKTDNEESDDSLAEDEQTPKKAEASKKRPLESANKTPAA 240

Query: 241 DKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRT 300
           DKKAKLVTPQKTDGKK V HVATPHPSK+AGK  AAND+NKQQTPKSA  AF CK+C R 
Sbjct: 241 DKKAKLVTPQKTDGKKVVGHVATPHPSKQAGKTPAANDQNKQQTPKSAGGAFPCKSCKRA 300

Query: 301 FGSETALQSHTKAKHTADK 319
           FGSE ALQSHTKAKH+A+K
Sbjct: 301 FGSEGALQSHTKAKHSAEK 317

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy TrEMBL
Match: A0A6J1G3S8 (histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 5.9e-127
Identity = 266/322 (82.61%), Postives = 288/322 (89.44%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGESKSKGSE V LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKSKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDK+FELSHNWKNGSVHFTGY SLLPEEEES YTDSEED P AV DNGK
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEEES-YTDSEEDLPQAVIDNGK 120

Query: 121 PE--PEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDN 180
           PE  P+P+PKKD KP TSGTKKKVQIVEP+K     +ID+KKN DSSDEDDD++E+S+D+
Sbjct: 121 PEPQPQPQPKKDEKPGTSGTKKKVQIVEPNK---GGSIDTKKNADSSDEDDDDNEDSSDD 180

Query: 181 ENENGGEEDDSDDDENESSGVDSEDSD--EDSDDSLEEDEQTPKKAEASKKRPLDSANKT 240
           EN NGGEEDDS DDENE SG DS+D D  ED DDS+EEDEQTPKKAEASKKRPL++ANKT
Sbjct: 181 ENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKT 240

Query: 241 PAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTC 300
           PAPDKK KLVTPQKTDGKKGV HVATPHPSK+AGKM AA+D+NKQQTPKSA+ AF CK+C
Sbjct: 241 PAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPAASDQNKQQTPKSASGAFPCKSC 300

Query: 301 NRTFGSETALQSHTKAKHTADK 319
            R FGSETALQSHTKAKH+A+K
Sbjct: 301 KRAFGSETALQSHTKAKHSAEK 317

[Close]

BLAST of CsaV3_3G036760 vs. ExPASy TrEMBL
Match: A0A6J1KU46 (histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.5e-125
Identity = 263/322 (81.68%), Postives = 285/322 (88.51%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWGAEVK GEPLLVSPGEE ILHLSQACLGESK+KGSE V LYVKVGNQKLVLGTLSS
Sbjct: 1   MEFWGAEVKAGEPLLVSPGEENILHLSQACLGESKNKGSEQVFLYVKVGNQKLVLGTLSS 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQVSFDLVFDK+FELSHNWKNGSVHFTGY SLLPEEEES YTDSEED P AV DNGK
Sbjct: 61  EKFPQVSFDLVFDKDFELSHNWKNGSVHFTGYLSLLPEEEES-YTDSEEDLPQAVIDNGK 120

Query: 121 PE--PEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDN 180
           PE  P+P+PKKD KP TSGTKKKVQIVEP+K     +ID+KKN+D SDEDDDEDE+S+D+
Sbjct: 121 PEPQPQPQPKKDEKPGTSGTKKKVQIVEPNK---GGSIDTKKNEDISDEDDDEDEDSSDD 180

Query: 181 ENENGGEEDDSDDDENESSGVDSEDSD--EDSDDSLEEDEQTPKKAEASKKRPLDSANKT 240
           EN NGGEEDDS DDENE SG DS+D D  ED DDS+EEDEQTPKKAEASKKRPL++ANKT
Sbjct: 181 ENANGGEEDDS-DDENEFSGDDSDDDDENEDLDDSMEEDEQTPKKAEASKKRPLEAANKT 240

Query: 241 PAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTC 300
           PAPDKK KLVTPQKTDGKKGV HVATPHPSK+AGKM  A+D+NKQQ PKSA+ AF CK+C
Sbjct: 241 PAPDKKTKLVTPQKTDGKKGVPHVATPHPSKQAGKMPPASDQNKQQIPKSASGAFPCKSC 300

Query: 301 NRTFGSETALQSHTKAKHTADK 319
            R FGSETALQSHTKAKH+ +K
Sbjct: 301 KRAFGSETALQSHTKAKHSTEK 317

[Close]

BLAST of CsaV3_3G036760 vs. TAIR 10
Match: AT5G03740.1 (histone deacetylase 2C )

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-51
Identity = 148/325 (45.54%), Postives = 197/325 (60.62%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+PL + PG ++++H+SQ  LGESK+  +EP+ LYV VG+ KL++GTLS 
Sbjct: 1   MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           EKFPQ+S ++V ++ F LSH WKNGSV F+GY             D+             
Sbjct: 61  EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYK-----------VDAS------------ 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNI----DSKKNKDSSDEDDDEDEEST 180
            +PEPE   D + + +G K       P   A   N     +  K K   D D  E++ S 
Sbjct: 121 -DPEPEDLIDDQLEAAGFK-----AAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSD 180

Query: 181 DNENENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLD-SANK 240
           D+++EN G+E++ +    ES   + + SD++ DDS E  E+TPKK E  KKR  + +++K
Sbjct: 181 DDDSENSGDEEE-EKVTAESDSEEDDSSDDEEDDSSE--EETPKKPEEPKKRSAEPNSSK 240

Query: 241 TPAPDKKAKLVTPQKTDGKKGVAHVATPHPSKKAGKMAAAND----KNKQQTPKSANAAF 300
            PA +KKAK VTPQKTD KK   HVATPHPSK+AGK +          +QQTPKSA  AF
Sbjct: 241 NPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSA-GAF 292

Query: 301 SCKTCNRTFGSETALQSHTKAKHTA 317
            CK+C RTF SE  LQSHTKAKH+A
Sbjct: 301 GCKSCTRTFTSEMGLQSHTKAKHSA 292

[Close]

BLAST of CsaV3_3G036760 vs. TAIR 10
Match: AT3G44750.1 (histone deacetylase 3 )

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-40
Identity = 139/319 (43.57%), Postives = 171/319 (53.61%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+P+ V+P E  ++H+SQA LGE K+K  E V L+VKVGNQ LVLGTLS+
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           E  PQ+  DLVFDKEFELSH W  GSV+F GY +  P  E   Y++ EE+          
Sbjct: 61  ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKT--PNIEPQGYSEEEEE---------- 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
            E E  P  +A    +  K K   V+P+                   DD+EDE  +D   
Sbjct: 121 -EEEEVPAGNAAKAVAKPKAKPAEVKPA------------------VDDEEDESDSD--- 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
             G +EDDS          D EDS        EE+E TPKK  +SKKR  ++  K P   
Sbjct: 181 --GMDEDDS----------DGEDS--------EEEEPTPKKPASSKKRANETTPKAPVSA 240

Query: 241 KKAKL-VTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRT 300
           KKAK+ VTPQKTD K            KK GK A        Q+PKSA+   SC +C +T
Sbjct: 241 KKAKVAVTPQKTDEK------------KKGGKAA-------NQSPKSASQV-SCGSCKKT 245

Query: 301 FGSETALQSHTKAKHTADK 319
           F S  AL+SH KAKH A K
Sbjct: 301 FNSGNALESHNKAKHAAAK 245

[Close]

BLAST of CsaV3_3G036760 vs. TAIR 10
Match: AT3G44750.2 (histone deacetylase 3 )

HSP 1 Score: 161.8 bits (408), Expect = 9.3e-40
Identity = 138/319 (43.26%), Postives = 169/319 (52.98%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG EVK G+P+ V+P E  ++H+SQA LGE K+K  E V L+VKVGNQ LVLGTLS+
Sbjct: 1   MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           E  PQ+  DLVFDKEFELSH W  GSV+F GY +  P  E   Y++ EE           
Sbjct: 61  ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKT--PNIEPQGYSEEEE----------- 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
              E  P  +A    +  K K   V+P+                   DD+EDE  +D   
Sbjct: 121 ---EEVPAGNAAKAVAKPKAKPAEVKPA------------------VDDEEDESDSD--- 180

Query: 181 ENGGEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAEASKKRPLDSANKTPAPD 240
             G +EDDS          D EDS        EE+E TPKK  +SKKR  ++  K P   
Sbjct: 181 --GMDEDDS----------DGEDS--------EEEEPTPKKPASSKKRANETTPKAPVSA 240

Query: 241 KKAKL-VTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFSCKTCNRT 300
           KKAK+ VTPQKTD K            KK GK A        Q+PKSA+   SC +C +T
Sbjct: 241 KKAKVAVTPQKTDEK------------KKGGKAA-------NQSPKSASQV-SCGSCKKT 242

Query: 301 FGSETALQSHTKAKHTADK 319
           F S  AL+SH KAKH A K
Sbjct: 301 FNSGNALESHNKAKHAAAK 242

[Close]

BLAST of CsaV3_3G036760 vs. TAIR 10
Match: AT5G22650.1 (histone deacetylase 2B )

HSP 1 Score: 156.8 bits (395), Expect = 3.0e-38
Identity = 137/310 (44.19%), Postives = 171/310 (55.16%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG  V       V+P E+ ++H+SQA L +   K  E VVL V VG  KLV+GTLS 
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQ 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           +KFPQ+SFDLVFDKEFELSH+    +VHF GY S   E+++ T +D +ED P AV     
Sbjct: 61  DKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSD-DEDVPEAV----- 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
           P P P     A  +      K      +K A     + K   D  DE DDEDE   D+++
Sbjct: 121 PAPAP-TAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDS 180

Query: 181 ENG--GEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAE-ASKKRPLDSANKTP 240
           E G   +EDDSDDDE E    DSED         EE+E+TPKK E  +KKRP +S +KTP
Sbjct: 181 EKGMDVDEDDSDDDEEE----DSED---------EEEEETPKKPEPINKKRPNESVSKTP 240

Query: 241 APDKKAK-----LVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFS 300
              KKAK       TPQKT+ KK   H ATPHP+KK GK    +  N  Q+PKS   +  
Sbjct: 241 VSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGK----SPVNANQSPKSGGQSSG 285

Query: 301 CKTCNRTFGS 303
                + F S
Sbjct: 301 GNNNKKPFNS 285

[Close]

BLAST of CsaV3_3G036760 vs. TAIR 10
Match: AT5G22650.2 (histone deacetylase 2B )

HSP 1 Score: 156.0 bits (393), Expect = 5.1e-38
Identity = 138/310 (44.52%), Postives = 172/310 (55.48%), Query Frame = 0


Query: 1   MEFWGAEVKVGEPLLVSPGEEKILHLSQACLGESKSKGSEPVVLYVKVGNQKLVLGTLSS 60
           MEFWG  V       V+P E+ ++H+SQA L +   K  E VVL V VG  KLV+GTLS 
Sbjct: 1   MEFWGVAVTPKNATKVTPEEDSLVHISQASL-DCTVKSGESVVLSVTVGGAKLVIGTLSQ 60

Query: 61  EKFPQVSFDLVFDKEFELSHNWKNGSVHFTGYTSLLPEEEESTYTDSEEDFPLAVTDNGK 120
           +KFPQ+SFDLVFDKEFELSH+    +VHF GY S   E+++ T +D +ED P AV     
Sbjct: 61  DKFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSD-DEDVPEAV----- 120

Query: 121 PEPEPEPKKDAKPDTSGTKKKVQIVEPSKVASNSNIDSKKNKDSSDEDDDEDEESTDNEN 180
           P P P     A  +      K      +K A     + K   D  DE DDEDE   D+++
Sbjct: 121 PAPAP-TAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDS 180

Query: 181 ENG--GEEDDSDDDENESSGVDSEDSDEDSDDSLEEDEQTPKKAE-ASKKRPLDSANKTP 240
           E G   +EDDSDDDE E    DSED         EE+E+TPKK E  +KKRP +S +KTP
Sbjct: 181 EKGMDVDEDDSDDDEEE----DSED---------EEEEETPKKPEPINKKRPNESVSKTP 240

Query: 241 APDKKAK-----LVTPQKTDGKKGVAHVATPHPSKKAGKMAAANDKNKQQTPKSANAAFS 300
              KKAK       TPQKT+ KKG  H ATPHP+KK GK    +  N  Q+PKS   +  
Sbjct: 241 VSGKKAKPAAAPASTPQKTEKKKG-GHTATPHPAKKGGK----SPVNANQSPKSGGQSSG 284

Query: 301 CKTCNRTFGS 303
                + F S
Sbjct: 301 GNNNKKPFNS 284

The following BLAST results are available for this feature:

BLAST of CsaV3_3G036760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137868.1	1.2e-161	100.00	histone deacetylase HDT1 isoform X1 [Cucumis sativus] >KGN59052.1 hypothetical p...	[more]
XP_008442794.1	3.4e-153	96.23	PREDICTED: histone deacetylase HDT1 [Cucumis melo]	[more]
XP_031738351.1	1.8e-149	100.00	histone deacetylase HDT1 isoform X2 [Cucumis sativus]	[more]
XP_038905525.1	3.7e-139	89.62	histone deacetylase HDT1 [Benincasa hispida]	[more]
XP_022144751.1	1.5e-129	83.70	histone deacetylase HDT1 [Momordica charantia]	[more]

BLAST of CsaV3_3G036760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6V9I6	2.1e-68	52.17	Histone deacetylase HDT1 OS=Solanum chacoense OX=4108 GN=HDT1 PE=2 SV=1	[more]
Q9LZR5	1.9e-50	45.54	Histone deacetylase HDT3 OS=Arabidopsis thaliana OX=3702 GN=HDT3 PE=1 SV=2	[more]
Q9M4U5	1.8e-48	45.82	Histone deacetylase HDT2 OS=Zea mays OX=4577 GN=HDT2 PE=1 SV=1	[more]
Q9M4U4	5.3e-48	47.65	Histone deacetylase HDT3 OS=Zea mays OX=4577 GN=HDT3 PE=2 SV=1	[more]
O24591	6.9e-48	48.16	Histone deacetylase HDT1 OS=Zea mays OX=4577 GN=HDT1 PE=1 SV=1	[more]

BLAST of CsaV3_3G036760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEE5	5.7e-162	100.00	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G748810 P...	[more]
A0A1S3B626	1.7e-153	96.23	histone deacetylase HDT1 OS=Cucumis melo OX=3656 GN=LOC103486568 PE=3 SV=1	[more]
A0A6J1CUC4	7.5e-130	83.70	histone deacetylase HDT1 OS=Momordica charantia OX=3673 GN=LOC111014365 PE=3 SV=...	[more]
A0A6J1G3S8	5.9e-127	82.61	histone deacetylase HDT1 OS=Cucurbita moschata OX=3662 GN=LOC111450473 PE=3 SV=1	[more]
A0A6J1KU46	2.5e-125	81.68	histone deacetylase HDT1-like OS=Cucurbita maxima OX=3661 GN=LOC111498681 PE=3 S...	[more]

BLAST of CsaV3_3G036760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03740.1	1.4e-51	45.54	histone deacetylase 2C	[more]
AT3G44750.1	1.9e-40	43.57	histone deacetylase 3	[more]
AT3G44750.2	9.3e-40	43.26	histone deacetylase 3	[more]
AT5G22650.1	3.0e-38	44.19	histone deacetylase 2B	[more]
AT5G22650.2	5.1e-38	44.52	histone deacetylase 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 291..314 e-value: 0.0019 score: 27.4
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 293..314
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 291..318 score: 12.840115
None	No IPR available	GENE3D	2.60.120.340	Nucleoplasmin core domain	coord: 1..96 e-value: 1.4E-18 score: 68.9
None	No IPR available	PFAM	PF12874	zf-met	coord: 291..312 e-value: 5.8E-5 score: 23.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..213
None	No IPR available	PANTHER	PTHR31802	32 KDA HEAT SHOCK PROTEIN-RELATED	coord: 1..313
None	No IPR available	PANTHER	PTHR31802:SF12	HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1	coord: 1..313
IPR041232	Nucleoplasmin-like domain	PFAM	PF17800	NPL	coord: 3..92 e-value: 8.5E-14 score: 52.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G036760.1	CsaV3_3G036760.1	mRNA