
CsaV3_3G035820 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAAGGGAAGGGAGAGAACAGAGGAAAGGGCTGCTCCCACACACAAAACTTCCGACCTTACATAAAAGTGAAAAGAGAAAGACAGAGTTCCTCACTTTTCTTCTCTCTGTTCTTCTTTTTCTTTTTCTTTTTACCCTTTTTCTTCCTCCTTTGCTTCCACTCTCACTTCATTTCTGTTCTGTTCAGGGAGCATTCACACAAATACCCACTTCCAAAATCAACCTATTACATGCTCTGTTTCTGTTTCCACTCCTAAAACTTTCTTTAACTCAATTCATATCAAGAAAACAAATGGAGGGTTTGATTATGAATCATGAAATGAAGCCGCTATCTAAGTTCAGGAGGATTTGTGTGTTCTGTGGTAGTAGTCAAGGCAAGAAGAGAAGCTACCAGGATTCCGCCATTGAACTTGGCAAGGAATTGGTAAAAAAAAAGAAAGATAAACTTCTTCTGTTCTTTTTTTACACTATTTTCGATCCATTTCCTTTTTCTCTGTTCAAATGATTATTGGGGGTGTTTTGTTTTTCATGTTGCTAGAGATTGTTCTGCATTTCTTTTTAAATGTTTTGGTGAACTTTATGTGTATATTGTTTGTTTGGAATTAATAAGTCCTTTGTTTTCTTTGTTTTCCATTGACGTTCAATTGGGATGTGTTGTGATTGTGTCCACAACGTGTTTGTGATTATGCTTGATCATGACCCTTTACTTATCTTCTTCAACTTTGATATTTCCTCTCCCATTTCCCATCAGAAACTTAAATTGCAAAGAAAATGCATGAATATCTCAGTTGGGTGACAGTTTGTTTCTTTTGAAATTTTATCCACATAGGCTTCTCATACATACATTCAAAGTAAAAGGAAAGAATCCCATTTCATAAATGAAACTCTCGAGTCATTTGAGATGATGAGTTTGGTTTTTGATGTTGTTTTTAAGGTTTCAAGGAACATTGATCTGGTCTACGGTGGGGGCAGCATTGGCCTGATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGGTATGCCCACATTTTTTTTTAATTACTTCCATTGGTCCCTTTAAGGTTGTTTTTATGATTCTATTTTTGGGTTTCTTCACCATTACAAGTTTTCTACTGTACTGACTTTTGTCGTGGTACTGTTCTGGTCCAGAGTTATACCCAAGACACTCATGCCTCGAGAGGTATGTCCGTTAACCTATCAGTCTCGTAAAGTTTTCAACCTTTTTTCTCTACTTATTTAGTTATATTAAAATGAAGGACTCTTCTTCTTTCTTGTTCATTAATCCGATTTTGCATTTATTTATTCCTACCCTTTCTTCTTTATGATACTTTTCCCACTGACTTCTGCTTTTTAGTTTTTTATTAGCTTTTTTGTTATCTTCTTTTTTTTCCCATCTTTACTTCTCTCTCTCTCTCTCTCTCTCTCTCATTTATTACTTCTTTTACCAGTACGTTCTTCTGTGTGGCTCAAGATCTGTGTTTTTCTTATGCTTGGGGGCATTTTCCATGATACTGCCATCACTATAGTTAGAACTTGTAGCTCTCTGATCCTTTCTAAACCATCTCAAACCTTACACTGATTCATAAAGATTTTAATTTTTTTTCTTACTTTACAGAGCTTCATTTTGCATTCAGCCCATGTCATGATAACAGTCAAATTAACTATAGAAATTGGAGATTTTATCTCTGGATCAAAACTATTTAGATTTGATCTCCTTTTTCCTACGAAACCCATCATTTTTTCTCTCTTCTAAACTCCTCTCTCTCGTTCCTTTTCTCTCTAACCTATTCTATTACACGGTTTCCTTTTGCAGTTGACTGGTGAAACTGTAGGGGAGGTGAAGGCAGTGGCAGATATGCATCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCCTTGCCAGGTGAGTATATAAAGCCTGCACTTTAACATTTTCCACTTGCACTATTAACTTCTTAAGTTTACTCTCTCAATCAAACCAAAAGTGCTCATCACCTTCTTTTGCTTTTACTCATTTTGGCATTCAACATTGACCAAAAACCCATCATTAACTTATCTTTCAAAACTTCCCCTCTCTTCCCCCACCCCCACCCTTCTCTCTCTCTCTCTCTCTCTTTTCCTTTCTTTTTACTTGACTGTTAAGTTACTATCATAGCATCTCAGAAACAAACAAAACAATTAGGCTATGTTGTCTGACAGTCAGTCAAAAGCTCTTAAAAGCCTTCTTCCTCTTTATCCTCCTTTTGTTCCCTCCTCTAAACCAAAACACGCAATCGTCATCTTATTATCTTTTTTCCATAATTTGACCCTTGTGCTTCTGCTTTCGGTGCCTGTCTTTCTATACCCTTCTTAGTTTCACTGATCAAGCAAAATTCAATTCCAAATATCTCAGACCTTTAACTTTTTTTTTTCCATTTCTTCCAAACAAATTATGTCACTATCTGTATTGATGGCATTGTGCATTTATAGCACCTGTGGCAGCCATGTTTTTAAGAAACCATCATTGACCTATCAATATCAGACACTGAAAAAGATAGTTTCTTAAATAGTTTGAGCTGTGGGCAGCTATGTTTTTCTTCTAAAATCCGATCCATAGCTTCACTAGTTCTGTATCTTCCATGTACGGTTTTTAAAAAAAGGCTACTTTGACTCACTTTGCTCGATGGTCCTTACTAACTATAGGGAATTATTACGTACCCTTTTTTAAAACTCTCTGTCCTTAATTGCTTCTTTTTAGAATTTCAAAATATTTTGATGTCCTGTCATCTAAACGTTCACTGATGTGTTATCAAAATATTCCCCCTTCTCTACTTCAACTGCAAATCTAAATCTCTGAGGCTTTGAATCATATTCTAATCAATTATGTTGATGTTTAAGTTAAATATTACATGGAACCACATCTCAGAATTTAAGAAGTCACATGTCATCACAGCTGAAGGGTAGTAGTCCATTAAATATAATTACAGGAAATGGATCATCTGAATCATTTTGTACCTGCAACATAGGTAGCTATAGAAGCATAGAAAGGAGATGGATATTAATCAGCTGAAATTCTTCTTCCAACCATATGAATGCTTGCAGGTGGCTATGGGACTCTAGAAGAACTACTTGAAGTCATAACCTGGGCTCAACTGGGAATTCATGACAAGCCAGTCTGTGTTCCTTCTTTTTGTTATTCAAAAAAAAAAATTCGCCTTACTTTGTATGTGCTGTGATTCGGTTAGCTTTGATAGTTACTGAATATGATCAAAATGAACACTGAAATCTGTAGGTGGGACTGTTGAATGTTGATGGATATTACAATTCACTACTGTCATTTATTGATAAAGCTGTCGAGGAAGGATTTGTCAGTCCAAGTGCACGCCAAATTATCGTATCAGCGCCAACGGCGAAGGAGTTAATGAAGAAGTTAGAGGTATTATGATATACCAAAACTATAAAATATAGCATATATACATACATCTTGTTCTTGAAGTTTACTGGTCAATTAGAGAATTTAAACCAATCCTATGTGTCTTTGTTCACTTTTGTGTGGGGACTGTTTGTGTTGTAGGAGTATGTGCCTTGCCATGAAAGAGTTGCTTCACAGCTGAGTTGGGAGATAGAGCAGCTTGGTTACCCTCAAAATTGTGATATCTCCAGGTGATTATTATTTCTGGAGATAATGGGTGAAGGAATTTTTGCAAATGGAGGAGGCTACTACGAAATTCTATAGCTATTATTTCCTATTTTGTGGAGGAATTTTTTTCCTCTTTGTTTTTTTTTTTTTTTTTTTTTTT ATGGAGGGTTTGATTATGAATCATGAAATGAAGCCGCTATCTAAGTTCAGGAGGATTTGTGTGTTCTGTGGTAGTAGTCAAGGCAAGAAGAGAAGCTACCAGGATTCCGCCATTGAACTTGGCAAGGAATTGGTTTCAAGGAACATTGATCTGGTCTACGGTGGGGGCAGCATTGGCCTGATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGCCTCGAGAGTTGACTGGTGAAACTGTAGGGGAGGTGAAGGCAGTGGCAGATATGCATCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCCTTGCCAGGTGGCTATGGGACTCTAGAAGAACTACTTGAAGTCATAACCTGGGCTCAACTGGGAATTCATGACAAGCCAGTGGGACTGTTGAATGTTGATGGATATTACAATTCACTACTGTCATTTATTGATAAAGCTGTCGAGGAAGGATTTGTCAGTCCAAGTGCACGCCAAATTATCGTATCAGCGCCAACGGCGAAGGAGTTAATGAAGAAGTTAGAGGAGTATGTGCCTTGCCATGAAAGAGTTGCTTCACAGCTGAGTTGGGAGATAGAGCAGCTTGGTTACCCTCAAAATTGTGATATCTCCAGGTGA ATGGAGGGTTTGATTATGAATCATGAAATGAAGCCGCTATCTAAGTTCAGGAGGATTTGTGTGTTCTGTGGTAGTAGTCAAGGCAAGAAGAGAAGCTACCAGGATTCCGCCATTGAACTTGGCAAGGAATTGGTTTCAAGGAACATTGATCTGGTCTACGGTGGGGGCAGCATTGGCCTGATGGGTTTAGTTTCACAAGCTGTTCATGATGGCGGTCGGCATGTCATTGGAGTTATACCCAAGACACTCATGCCTCGAGAGTTGACTGGTGAAACTGTAGGGGAGGTGAAGGCAGTGGCAGATATGCATCAAAGGAAGGCAGAGATGGCAAAGCATTCAGATGCTTTTATTGCCTTGCCAGGTGGCTATGGGACTCTAGAAGAACTACTTGAAGTCATAACCTGGGCTCAACTGGGAATTCATGACAAGCCAGTGGGACTGTTGAATGTTGATGGATATTACAATTCACTACTGTCATTTATTGATAAAGCTGTCGAGGAAGGATTTGTCAGTCCAAGTGCACGCCAAATTATCGTATCAGCGCCAACGGCGAAGGAGTTAATGAAGAAGTTAGAGGAGTATGTGCCTTGCCATGAAAGAGTTGCTTCACAGCTGAGTTGGGAGATAGAGCAGCTTGGTTACCCTCAAAATTGTGATATCTCCAGGTGA MEGLIMNHEMKPLSKFRRICVFCGSSQGKKRSYQDSAIELGKELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFVSPSARQIIVSAPTAKELMKKLEEYVPCHERVASQLSWEIEQLGYPQNCDISR* Homology
BLAST of CsaV3_3G035820 vs. NCBI nr
Match: KGN58962.1 (hypothetical protein Csa_002194 [Cucumis sativus]) HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. NCBI nr
Match: XP_008442685.1 (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo] >KAA0044008.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo var. makuwa] >TYK25132.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Cucumis melo var. makuwa]) HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122 Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. NCBI nr
Match: XP_038903711.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Benincasa hispida]) HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119 Identity = 215/222 (96.85%), Postives = 221/222 (99.55%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. NCBI nr
Match: NP_001292681.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like [Cucumis sativus] >AGE00883.1 lysine decarboxylase [Cucumis sativus]) HSP 1 Score: 427.9 bits (1099), Expect = 5.2e-116 Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. NCBI nr
Match: XP_022145645.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Momordica charantia]) HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115 Identity = 212/218 (97.25%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 7.3e-105 Identity = 183/201 (91.04%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy Swiss-Prot
Match: Q9LFH3 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 4.4e-102 Identity = 181/209 (86.60%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 3.8e-101 Identity = 180/209 (86.12%), Postives = 197/209 (94.26%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 1.6e-99 Identity = 174/209 (83.25%), Postives = 193/209 (92.34%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 3.3e-97 Identity = 170/207 (82.13%), Postives = 193/207 (93.24%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy TrEMBL
Match: A0A0A0LE04 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G739570 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 8.1e-123 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy TrEMBL
Match: A0A5D3DNN0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002570 PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy TrEMBL
Match: A0A1S3B715 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103486483 PE=3 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122 Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy TrEMBL
Match: L7YK77 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 2.5e-116 Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. ExPASy TrEMBL
Match: A0A6J1CV24 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Momordica charantia OX=3673 GN=LOC111015045 PE=3 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 9.6e-116 Identity = 212/218 (97.25%), Postives = 216/218 (99.08%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 381.3 bits (978), Expect = 5.2e-106 Identity = 183/201 (91.04%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 372.1 bits (954), Expect = 3.2e-103 Identity = 181/209 (86.60%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 369.0 bits (946), Expect = 2.7e-102 Identity = 180/209 (86.12%), Postives = 197/209 (94.26%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. TAIR 10
Match: AT2G37210.2 (lysine decarboxylase family protein ) HSP 1 Score: 365.5 bits (937), Expect = 3.0e-101 Identity = 182/225 (80.89%), Postives = 196/225 (87.11%), Query Frame = 0
BLAST of CsaV3_3G035820 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 332.4 bits (851), Expect = 2.8e-91 Identity = 159/209 (76.08%), Postives = 187/209 (89.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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