CsaV3_3G035460 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G035460
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	60S ribosomal protein L4
Location	chr3: 29724660 .. 29727374 (+)
RNA-Seq Expression	CsaV3_3G035460
Synteny	CsaV3_3G035460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTTACTAGCTACACCTAAACAATTATCAAACGATCCAAATAACATATCTTCCGATGGTTACCTTGGATCAGCTCACTATCGGGCCAGGGCTAACCCTCGGACCATTTATTATGGGCCGGGCCCAAAAGCATTAGTCTGGATTTTAAAAACCTATCTATAAATTCATCATTTATATCACTTTCTCCTTCCTACAGAGTGAAAACCCTAGTTTCTCCACATTCACTCGCCCCAAAATGGCCGCCGCCGCTCGCCCTTTGGTCGCCGTTCAAGTTCTCGAAGGCGACATGGCCACCGATTCTTCTCCGACGGTGCCACTTCCCGATGTCATGAAAGCTTCTATCCGTCCTGACATCGTCAGCTTCGTCCACTCCAACATTTCAAAGAACAGTCGCCAACCCTATGCCGTAAGCAAGCGCGCAGGTCATCAAACTTCCGCCGAGTCATGGGGTACTGGACGAGCTGTTTCTCGTATCCCTCGTGTTCCTGGTGGCGGTACTCACCGTGCTGGTCAAGGAGCTTTCGGAAACATGTGTCGTGGAGGTCGTATGTTTGCTCCGACGAAGATCTGGCGCCGATGGCACCGAAAGATCAACGTGAATCAGAAGAGGTACGCTGTTGTTTCTGCCATTGCTGCTTCTGCCATTCCTTCTTTGGTTTTGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTAGCGACTCCGCCGAGGGAATCGAGAAAACTTCTTCCGCGATTAAGGTGTTGAAGCAGGTTGGTGCTTTGCCTGATGCTGAGAAAGCGAAGGACAGTCATGCCATTCGTACTGGAAAGGGTAAGATGAGGAACCGTCGTTACATTTCACGAAAGGGTCCGTTGATTGTTTATGGTACTGAAGGTGCCAAGCTTGTCAAGGCCTTCCGTAACATTCCGGGTATCGATATTGTGAATGTTGAGAGGTTGAATCTTTTGAAGTTGGCTCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACCAAAACTGCTTTTGAGAAGCTTGATTCAATTTATGGGTCGTTTGAGAAGTCTTCTGAGAAGAAGAAGGGTTACGTTCTTCCAAGGTCGAAAATGGTCAATGCTGATTTGGCTAGGATCATCAATTCCGACGAGGTTCAATCTGTTGTTAAACCCATCAAGAAGGGTGTGAAGAGACCTTCATTGAAGAAGAACCCCCTCAAGAACCTTAACGCTATGTTGAAGCTTAACCCATATGCTAAGACTGCAAGGAGAATGTCTTTATTGGCTGAGGCACAGCGCGTTAAAGCTAAGAAGGAAAAGCTCGACAAGAAGAGGGGCATTATCCCGAAGGTATCTCTCAAATTTGCCTTTGATAATTCTCACTTTTTTTATTACTATGTGGTTGGTTTCATATGGTAGGAGATTTTCAAATTGTTAATTGTTACTAAAACCAGTTTTGAATTGCGTTTCAATATTCTGATGTAGTTAGATGTGATGATTGCATTGAAGTCTTGGATGCTTATACATTATTACATTTGTGGCACCGTTTTGTAACTGTTTTGGAACCGTATTATTTTGTTTGTTAGATTCTATAGTATGGCATAGAAGAGAGATAGATCCTGCCAAGGTTTTAGTTTCCGTTCCGATTTTTCTTAGGAAACCCAACTCCTTTAATTGATACGTATCATCTGTTTCTCATAGACATTGTTGAACCATTTTTTAATAGGTGGTTCGTTCTTTACTTTGGTTTAAACTAATTGCAATAAGCTAGAATTAAAATGTTGATGTCATTGAAGATATCCAGGTCCTAAATTTATGGAAATGTTGATTCACACCTTCCATGGACGTCAAACCCATGTAATCATGGAAATATTGGCGTGTCACCGGAACGTTAATACTATAGCTTTAAGTAGCTTGGGTAGTTACCATCTTCTATTGTTTGTTATGTGATATTGCGACCCCTATTGACCTATGAGGGCATTTTGTTTTCAGGAGGACGCTGCAGCAGTAAAGGCAGCAGGCAAAGCATGGTACCAGACAATGATTTCAGATAGCGATTACACCGAGTTTGATAACTTCTCCAAGTGGCTTGGTGTCTCACAGTGATTTCCTTTCTCTTTGATATTTTCATAGACCTTAGTTTGTTAATTAAATTTTGTATGCTGTTGTTGCTCCTTTTCTTGTTTTGTGTCATGGAGGAAATTAGGTTGAGGAATAGTCAATATTATACTGATTGGGATCATGAGCTTGAGCTTGAGCGTTTCCTCGTTTCTTGCCTCCTTTCTTGTCTTGGTGGTGGAAGAGTATTTACTTTTGGAAATGAAATTGAACATCTCAAGAGCTTTAGGAAAATCAGTTTAGTTTTTTTATATCAGTAATTTGCACTGAGGTTTACACTTTCAATATTATATTTGAATTTTGAACCCATTGTTTTTTGTTATTTTATAACTTTGTACTGCATTGAATTCATTTTTCATGCTATTTGTGAGGGTTGCTGAGTTTATAGTATATCTATACCATCTGGGGGCATAGACTAAGTCAGGTTGGTTTGTTTAAAGATTAAAAATCTGTTCATGTTACAATAAGAAAACATGAACTCACTGGTTAGAATTAATTTTGATTGTTGAACACTTTAATAAGTGATTTTATTGAAAATTTACAAGTAAAGCTTGTTTTGCCGTAATTTCTATTAATTCTTGATTTAGAATAAGTAATTATAATGGGT

mRNA sequence

ATGGCCGCCGCCGCTCGCCCTTTGGTCGCCGTTCAAGTTCTCGAAGGCGACATGGCCACCGATTCTTCTCCGACGGTGCCACTTCCCGATGTCATGAAAGCTTCTATCCGTCCTGACATCGTCAGCTTCGTCCACTCCAACATTTCAAAGAACAGTCGCCAACCCTATGCCGTAAGCAAGCGCGCAGGTCATCAAACTTCCGCCGAGTCATGGGGTACTGGACGAGCTGTTTCTCGTATCCCTCGTGTTCCTGGTGGCGGTACTCACCGTGCTGGTCAAGGAGCTTTCGGAAACATGTGTCGTGGAGGTCGTATGTTTGCTCCGACGAAGATCTGGCGCCGATGGCACCGAAAGATCAACGTGAATCAGAAGAGGTACGCTGTTGTTTCTGCCATTGCTGCTTCTGCCATTCCTTCTTTGGTTTTGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTAGCGACTCCGCCGAGGGAATCGAGAAAACTTCTTCCGCGATTAAGGTGTTGAAGCAGGTTGGTGCTTTGCCTGATGCTGAGAAAGCGAAGGACAGTCATGCCATTCGTACTGGAAAGGGTAAGATGAGGAACCGTCGTTACATTTCACGAAAGGGTCCGTTGATTGTTTATGGTACTGAAGGTGCCAAGCTTGTCAAGGCCTTCCGTAACATTCCGGGTATCGATATTGTGAATGTTGAGAGGTTGAATCTTTTGAAGTTGGCTCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACCAAAACTGCTTTTGAGAAGCTTGATTCAATTTATGGGTCGTTTGAGAAGTCTTCTGAGAAGAAGAAGGGTTACGTTCTTCCAAGGTCGAAAATGGTCAATGCTGATTTGGCTAGGATCATCAATTCCGACGAGGTTCAATCTGTTGTTAAACCCATCAAGAAGGGTGTGAAGAGACCTTCATTGAAGAAGAACCCCCTCAAGAACCTTAACGCTATGTTGAAGCTTAACCCATATGCTAAGACTGCAAGGAGAATGTCTTTATTGGCTGAGGCACAGCGCGTTAAAGCTAAGAAGGAAAAGCTCGACAAGAAGAGGGGCATTATCCCGAAGGAGGACGCTGCAGCAGTAAAGGCAGCAGGCAAAGCATGGTACCAGACAATGATTTCAGATAGCGATTACACCGAGTTTGATAACTTCTCCAAGTGGCTTGGTGTCTCACAGTGA

Coding sequence (CDS)

ATGGCCGCCGCCGCTCGCCCTTTGGTCGCCGTTCAAGTTCTCGAAGGCGACATGGCCACCGATTCTTCTCCGACGGTGCCACTTCCCGATGTCATGAAAGCTTCTATCCGTCCTGACATCGTCAGCTTCGTCCACTCCAACATTTCAAAGAACAGTCGCCAACCCTATGCCGTAAGCAAGCGCGCAGGTCATCAAACTTCCGCCGAGTCATGGGGTACTGGACGAGCTGTTTCTCGTATCCCTCGTGTTCCTGGTGGCGGTACTCACCGTGCTGGTCAAGGAGCTTTCGGAAACATGTGTCGTGGAGGTCGTATGTTTGCTCCGACGAAGATCTGGCGCCGATGGCACCGAAAGATCAACGTGAATCAGAAGAGGTACGCTGTTGTTTCTGCCATTGCTGCTTCTGCCATTCCTTCTTTGGTTTTGGCTCGTGGCCACCGGATCGAGTCTGTTCCGGAATTGCCGCTTGTGATTAGCGACTCCGCCGAGGGAATCGAGAAAACTTCTTCCGCGATTAAGGTGTTGAAGCAGGTTGGTGCTTTGCCTGATGCTGAGAAAGCGAAGGACAGTCATGCCATTCGTACTGGAAAGGGTAAGATGAGGAACCGTCGTTACATTTCACGAAAGGGTCCGTTGATTGTTTATGGTACTGAAGGTGCCAAGCTTGTCAAGGCCTTCCGTAACATTCCGGGTATCGATATTGTGAATGTTGAGAGGTTGAATCTTTTGAAGTTGGCTCCTGGAGGTCATCTTGGAAGATTTGTTATCTGGACCAAAACTGCTTTTGAGAAGCTTGATTCAATTTATGGGTCGTTTGAGAAGTCTTCTGAGAAGAAGAAGGGTTACGTTCTTCCAAGGTCGAAAATGGTCAATGCTGATTTGGCTAGGATCATCAATTCCGACGAGGTTCAATCTGTTGTTAAACCCATCAAGAAGGGTGTGAAGAGACCTTCATTGAAGAAGAACCCCCTCAAGAACCTTAACGCTATGTTGAAGCTTAACCCATATGCTAAGACTGCAAGGAGAATGTCTTTATTGGCTGAGGCACAGCGCGTTAAAGCTAAGAAGGAAAAGCTCGACAAGAAGAGGGGCATTATCCCGAAGGAGGACGCTGCAGCAGTAAAGGCAGCAGGCAAAGCATGGTACCAGACAATGATTTCAGATAGCGATTACACCGAGTTTGATAACTTCTCCAAGTGGCTTGGTGTCTCACAGTGA

Protein sequence

MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGALPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSDEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDKKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ*

Homology

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BLAST of CsaV3_3G035460 vs. NCBI nr
Match: XP_004137800.1 (60S ribosomal protein L4 [Cucumis sativus] >KGN58927.1 hypothetical protein Csa_001121 [Cucumis sativus])

HSP 1 Score: 780.4 bits (2014), Expect = 7.5e-222
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180
           VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180

Query: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240
           LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL
Sbjct: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300

Query: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360
           DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360

Query: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

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BLAST of CsaV3_3G035460 vs. NCBI nr
Match: XP_008442632.1 (PREDICTED: 60S ribosomal protein L4 [Cucumis melo] >KAA0044041.1 60S ribosomal protein L4 [Cucumis melo var. makuwa] >TYK25099.1 60S ribosomal protein L4 [Cucumis melo var. makuwa])

HSP 1 Score: 765.4 bits (1975), Expect = 2.5e-217
Identity = 398/404 (98.51%), Postives = 400/404 (99.01%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLVAVQ LEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR
Sbjct: 3   AAAARPLVAVQTLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 
Sbjct: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAF 182

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
           PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 183 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 303 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR  IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 363 KRS-IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

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BLAST of CsaV3_3G035460 vs. NCBI nr
Match: XP_038905069.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 757.7 bits (1955), Expect = 5.2e-215
Identity = 389/404 (96.29%), Postives = 399/404 (98.76%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLVAVQ LEGDMATDSS TVPLPDVMKASIRPDIV+FVH+NISKNSRQPYAVSKR
Sbjct: 4   AAAARPLVAVQSLEGDMATDSSQTVPLPDVMKASIRPDIVNFVHANISKNSRQPYAVSKR 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 123

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQ+GAL
Sbjct: 124 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQIGAL 183

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
           PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPG+DIVNVERLN
Sbjct: 184 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVDIVNVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFV+WTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVVWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 303

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 304 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 363

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR IIPKE+A AVKAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 KRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of CsaV3_3G035460 vs. NCBI nr
Match: XP_022983290.1 (60S ribosomal protein L4-like [Cucurbita maxima])

HSP 1 Score: 753.4 bits (1944), Expect = 9.8e-214
Identity = 387/405 (95.56%), Postives = 398/405 (98.27%), Query Frame = 0


Query: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVAVQ LEGDMATD++PTVPLPDVMKASIRPDIV+FVH+NISKN RQPYAVSK
Sbjct: 1   MAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180
           VNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+GA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIGA 180

Query: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240
           LPDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL
Sbjct: 181 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAK+EKLD
Sbjct: 301 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKQEKLD 360

Query: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KKR IIPKE+A AVKAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CsaV3_3G035460 vs. NCBI nr
Match: KAG6580580.1 (60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017334.1 60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 753.1 bits (1943), Expect = 1.3e-213
Identity = 387/404 (95.79%), Postives = 397/404 (98.27%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLVAVQ LEGDMATD++PTVPLPDVMKASIRPDIV+FVH+NISKN RQPYAVSKR
Sbjct: 3   AAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+GAL
Sbjct: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIGAL 182

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
           PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 183 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 302

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 303 EVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR IIPKE+A AVKAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 KRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 406

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 2.6e-201
Identity = 357/404 (88.37%), Postives = 383/404 (94.80%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV VQ LEGDMATD + TV LPDVMKASIRPDIV+FVHSNISKNSRQPYAVSK+
Sbjct: 5   AAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKK 64

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 65  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 124

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           NQKRYAVVSAIAASA+PSLVLARGH+IE+VPELPLV+SDS EG+E+TS+A+KVLKQ+GA 
Sbjct: 125 NQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGAY 184

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
            DAEKAKDSH+IR GKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPGIDI+NVERLN
Sbjct: 185 SDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERLN 244

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFV+WTK+AFEKLDSIYGSF+K SEKK GYVLPRSKMVNADLARIINSD
Sbjct: 245 LLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINSD 304

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVV PI++G KR  LKKNPL+ LN MLKLNPYAKTARRMSLLAEA+RVKAKKEKLDK
Sbjct: 305 EVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLDK 364

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR  I KE+A+ +KAAGKAWYQTMISDSDYTEFDNF+KWLGVSQ
Sbjct: 365 KRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-190
Identity = 332/404 (82.18%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV VQ L+GDM+TD S TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           N KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+GA 
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
            DAEKAK+S  IR GKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+++ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVV PIK G KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR ++ KE+A A+KAAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 1.6e-190
Identity = 331/404 (81.93%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV +Q L+GDM+TD S TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           N KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+GA 
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
            DAEKAK+S  IR GKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+++ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           E+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR  + KE+A A+KAAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 2.7e-121
Identity = 218/358 (60.89%), Postives = 277/358 (77.37%), Query Frame = 0


Query: 3   AAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL++V   +G+    S   V +P V +A IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGALP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLV+ D  E  +KT  A+ +LK++ A  
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPGI ++NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSDE 302
           L+LAPGGH+GRF IWT++AF KLD +YG++ KS++ K  Y LP  KM N DL RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           +Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTARR ++L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 436.4 bits (1121), Expect = 3.5e-121
Identity = 217/358 (60.61%), Postives = 277/358 (77.37%), Query Frame = 0


Query: 3   AAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62
           A ARPL++V   +G+    S   V +P V KA IRPDIV+FVH+N+ KN+RQPYAVSK A
Sbjct: 6   ACARPLISVYSEKGE---TSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 65

Query: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
           GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N  
Sbjct: 66  GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 125

Query: 123 QKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGALP 182
           QKRYAV SA+AASA+P+L++++GHRIE +PE+PLV+ D  E  +KT  A+ +LK++ A  
Sbjct: 126 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 185

Query: 183 DAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLNL 242
           D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPGI ++NV +LNL
Sbjct: 186 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVSKLNL 245

Query: 243 LKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSDE 302
           L+LAPGGH+GRF IWT++AF KLD +YG++ KS++ K  Y LP  KM N DL RI+ S E
Sbjct: 246 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 305

Query: 303 VQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 361
           +Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTARR ++L + + +KAK++K D
Sbjct: 306 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPD 359

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy TrEMBL
Match: A0A0A0LDW3 (Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736750 PE=3 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 3.6e-222
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK
Sbjct: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180
           VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA
Sbjct: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180

Query: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240
           LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL
Sbjct: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300

Query: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360
           DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD
Sbjct: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360

Query: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy TrEMBL
Match: A0A5D3DP61 (60S ribosomal protein L4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002230 PE=3 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.2e-217
Identity = 398/404 (98.51%), Postives = 400/404 (99.01%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLVAVQ LEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR
Sbjct: 3   AAAARPLVAVQTLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 
Sbjct: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAF 182

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
           PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 183 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 303 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR  IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 363 KRS-IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy TrEMBL
Match: A0A1S3B5N1 (60S ribosomal protein L4 OS=Cucumis melo OX=3656 GN=LOC103486445 PE=3 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 1.2e-217
Identity = 398/404 (98.51%), Postives = 400/404 (99.01%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLVAVQ LEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR
Sbjct: 3   AAAARPLVAVQTLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 122

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 
Sbjct: 123 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAF 182

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
           PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 183 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 303 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 362

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR  IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 363 KRS-IPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy TrEMBL
Match: A0A6J1J5G3 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 4.8e-214
Identity = 387/405 (95.56%), Postives = 398/405 (98.27%), Query Frame = 0


Query: 1   MAAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 60
           MAAAARPLVAVQ LEGDMATD++PTVPLPDVMKASIRPDIV+FVH+NISKN RQPYAVSK
Sbjct: 1   MAAAARPLVAVQSLEGDMATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSK 60

Query: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
           RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 61  RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120

Query: 121 VNQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGA 180
           VNQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQ+GA
Sbjct: 121 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQIGA 180

Query: 181 LPDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240
           LPDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL
Sbjct: 181 LPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERL 240

Query: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINS 300
           NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADL+RIINS
Sbjct: 241 NLLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINS 300

Query: 301 DEVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLD 360
           DEVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAK+EKLD
Sbjct: 301 DEVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKQEKLD 360

Query: 361 KKRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KKR IIPKE+A AVKAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 361 KKRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of CsaV3_3G035460 vs. ExPASy TrEMBL
Match: A0A6J1F3R9 (60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 1.4e-213
Identity = 387/404 (95.79%), Postives = 397/404 (98.27%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLVAVQ LEGD+ATD++PTVPLPDVMKASIRPDIV+FVH+NISKN RQPYAVSKR
Sbjct: 4   AAAARPLVAVQSLEGDIATDAAPTVPLPDVMKASIRPDIVNFVHANISKNRRQPYAVSKR 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 123

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           NQKRYAVVSAIAASA+PSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIK LKQVGAL
Sbjct: 124 NQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKALKQVGAL 183

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
           PDAEKAKDSHAIR GKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN
Sbjct: 184 PDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPR+KMVNADL+RIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRAKMVNADLSRIINSD 303

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVVKPIKK VKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK
Sbjct: 304 EVQSVVKPIKKDVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 363

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR IIPKE+A AVKAAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 364 KRNIIPKEEATAVKAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 407

[Close]

BLAST of CsaV3_3G035460 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 667.2 bits (1720), Expect = 8.6e-192
Identity = 332/404 (82.18%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV VQ L+GDM+TD S TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           N KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+GA 
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
            DAEKAK+S  IR GKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+++ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVV PIK G KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR ++ KE+A A+KAAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 364 KRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of CsaV3_3G035460 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-191
Identity = 331/404 (81.93%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV +Q L+GDM+TD S TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           N KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+GA 
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
            DAEKAK+S  IR GKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+++ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           E+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR  + KE+A A+KAAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 363 KRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of CsaV3_3G035460 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 661.8 bits (1706), Expect = 3.6e-190
Identity = 332/404 (82.18%), Postives = 372/404 (92.08%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           +AAARPLV VQ L+GDM+TD S TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 4   SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           N KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+GA 
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 183

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
            DAEKAK+S  IR GKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PG+++ +VERLN
Sbjct: 184 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERLN 243

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 244 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 303

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           EVQSVV PIK G KR  LKKNPLKNLN M KLNPYAKTA+RMSLLAEA RVKAKKEKL+K
Sbjct: 304 EVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLEK 363

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR ++ KE A A+KAAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 364 KRKVVTKE-AQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of CsaV3_3G035460 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 661.4 bits (1705), Expect = 4.7e-190
Identity = 331/404 (81.93%), Postives = 372/404 (92.08%), Query Frame = 0


Query: 2   AAAARPLVAVQVLEGDMATDSSPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKR 61
           AAAARPLV +Q L+GDM+TD S TV LPDVM A +RPDIV+FVH+ IS NSRQPYAVSK+
Sbjct: 3   AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62

Query: 62  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
           AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63  AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122

Query: 122 NQKRYAVVSAIAASAIPSLVLARGHRIESVPELPLVISDSAEGIEKTSSAIKVLKQVGAL 181
           N KR+A+VSAIAA+A+P+LV+ARGH+IE+VPE+PLV+SDSAE +EKTS+AIKVLKQ+GA 
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGAY 182

Query: 182 PDAEKAKDSHAIRTGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGIDIVNVERLN 241
            DAEKAK+S  IR GKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PG+++ +VERLN
Sbjct: 183 DDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERLN 242

Query: 242 LLKLAPGGHLGRFVIWTKTAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLARIINSD 301
           LLKLAPGGHLGRFVIWTK+AFEKL+SIYGSFEK SEKKKGYVLPR+KMVNADLARIINSD
Sbjct: 243 LLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINSD 302

Query: 302 EVQSVVKPIKKGVKRPSLKKNPLKNLNAMLKLNPYAKTARRMSLLAEAQRVKAKKEKLDK 361
           E+QSVV PIKK  KR  LKKNPLKNLN MLKLNPYAKTA+RMSLLAEAQRVKAKKEKL K
Sbjct: 303 EIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLAK 362

Query: 362 KRGIIPKEDAAAVKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406
           KR  + KE A A+KAAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 363 KRKTVTKE-ALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

The following BLAST results are available for this feature:

BLAST of CsaV3_3G035460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137800.1	7.5e-222	100.00	60S ribosomal protein L4 [Cucumis sativus] >KGN58927.1 hypothetical protein Csa_...	[more]
XP_008442632.1	2.5e-217	98.51	PREDICTED: 60S ribosomal protein L4 [Cucumis melo] >KAA0044041.1 60S ribosomal p...	[more]
XP_038905069.1	5.2e-215	96.29	60S ribosomal protein L4 [Benincasa hispida]	[more]
XP_022983290.1	9.8e-214	95.56	60S ribosomal protein L4-like [Cucurbita maxima]	[more]
KAG6580580.1	1.3e-213	95.79	60S ribosomal protein L4-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]

BLAST of CsaV3_3G035460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	2.6e-201	88.37	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
P49691	1.2e-190	82.18	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
Q9SF40	1.6e-190	81.93	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P08429	2.7e-121	60.89	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
P02385	3.5e-121	60.61	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]

BLAST of CsaV3_3G035460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDW3	3.6e-222	100.00	Ribos_L4_asso_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73...	[more]
A0A5D3DP61	1.2e-217	98.51	60S ribosomal protein L4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B5N1	1.2e-217	98.51	60S ribosomal protein L4 OS=Cucumis melo OX=3656 GN=LOC103486445 PE=3 SV=1	[more]
A0A6J1J5G3	4.8e-214	95.56	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111481914 PE=3 S...	[more]
A0A6J1F3R9	1.4e-213	95.79	60S ribosomal protein L4-like OS=Cucurbita moschata OX=3662 GN=LOC111442111 PE=3...	[more]

BLAST of CsaV3_3G035460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02870.1	8.6e-192	82.18	Ribosomal protein L4/L1 family	[more]
AT3G09630.1	1.1e-191	81.93	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	3.6e-190	82.18	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	4.7e-190	81.93	Ribosomal protein L4/L1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 342..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 2..405
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 2..405
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 280..352 e-value: 2.2E-28 score: 98.1
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 26..266 e-value: 1.3E-39 score: 135.9
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 3..308 e-value: 1.4E-140 score: 469.7
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 21..267
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 120..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G035460.1	CsaV3_3G035460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome