CsaV3_3G034410 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G034410
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Copper transporter
Location	chr3: 29184585 .. 29185418 (+)
RNA-Seq Expression	CsaV3_3G034410
Synteny	CsaV3_3G034410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATATTTTCAAAAAAATAAATTTGAAAAAAAAACGAAATGAAGAAGGCTGATTTAAACTTTGCAGGAGGATCGCTTGAAGGCGAGTCATGGCATCTTATTTTTTGTTTCCAATTCCTCGATTTAAAAAACCCCATTCGTTACGCCTAAAATAGTCACATCATCCTTCGCAAAAAAAGTCTAGGACTAAAAATGAAAACGACGTCCCATCATAACTTGGGTGCCGTCCCACCACCGTCGCTGGAGACCAATCCGGCGGAAAAGGCAGTGGTGCACAAGTCTTTATACTGGGGACACGATGCCCAAGTTCTGTTCACCGGTTGGCCGGGGACGAACTCGGGGATGTACGCATTGGCGGTGATATTCGTGTTTGTTCTGGCGGTGATGGTGGAATGGCTTAATTCCTGCAACTTCATGAAGCAAAACGGAGAGAGTGTGGGGAAGGTGGTGGTGCAAACGGCGATACACGCAGTGCGTACGGGTTTAAGTTATATGGTGATGCTAGCAGTGATGTCGTTCAACGGCGGGATCTTCTTGGCTGCGGTGGGTGGCCATGCTGTGGGCTTCGTTCTTTTCAAAAGGCGAGGCGAAAGAAAGGATGTCCTATAAGATCCTAGAATGGGCCTTGATTGTGTGGGCTTTCATGTGTAATGCCCACAAAACCCAATAACAAAGCCCATTGACCAACAAAATGCATACTTTTTCTTCCTAATTTCAATTCTTATCAAATAACCACTGTAATTTCAATTCTTCCTTTTTCTTTTTCTTTTTTGGATTATCCTTTTTGCTTTAGATTTTTCTAAATCTTAAATAAAAATCTATGGAATTTTATTT

mRNA sequence

ATGAAAACGACGTCCCATCATAACTTGGGTGCCGTCCCACCACCGTCGCTGGAGACCAATCCGGCGGAAAAGGCAGTGGTGCACAAGTCTTTATACTGGGGACACGATGCCCAAGTTCTGTTCACCGGTTGGCCGGGGACGAACTCGGGGATGTACGCATTGGCGGTGATATTCGTGTTTGTTCTGGCGGTGATGGTGGAATGGCTTAATTCCTGCAACTTCATGAAGCAAAACGGAGAGAGTGTGGGGAAGGTGGTGGTGCAAACGGCGATACACGCAGTGCGTACGGGTTTAAGTTATATGGTGATGCTAGCAGTGATGTCGTTCAACGGCGGGATCTTCTTGGCTGCGGTGGGTGGCCATGCTGTGGGCTTCGTTCTTTTCAAAAGGCGAGGCGAAAGAAAGGATGTCCTATAA

Coding sequence (CDS)

ATGAAAACGACGTCCCATCATAACTTGGGTGCCGTCCCACCACCGTCGCTGGAGACCAATCCGGCGGAAAAGGCAGTGGTGCACAAGTCTTTATACTGGGGACACGATGCCCAAGTTCTGTTCACCGGTTGGCCGGGGACGAACTCGGGGATGTACGCATTGGCGGTGATATTCGTGTTTGTTCTGGCGGTGATGGTGGAATGGCTTAATTCCTGCAACTTCATGAAGCAAAACGGAGAGAGTGTGGGGAAGGTGGTGGTGCAAACGGCGATACACGCAGTGCGTACGGGTTTAAGTTATATGGTGATGCTAGCAGTGATGTCGTTCAACGGCGGGATCTTCTTGGCTGCGGTGGGTGGCCATGCTGTGGGCTTCGTTCTTTTCAAAAGGCGAGGCGAAAGAAAGGATGTCCTATAA

Protein sequence

MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGERKDVL*

Homology

[Close]

BLAST of CsaV3_3G034410 vs. NCBI nr
Match: XP_004137921.2 (copper transporter 4 [Cucumis sativus] >KGN58819.1 hypothetical protein Csa_001531 [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 2.9e-72
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60
           MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF
Sbjct: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120
           VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 121 HAVGFVLFKRRGERKDVL 139
           HAVGFVLFKRRGERKDVL
Sbjct: 121 HAVGFVLFKRRGERKDVL 138

[Close]

BLAST of CsaV3_3G034410 vs. NCBI nr
Match: KAA0044132.1 (copper transporter 4 [Cucumis melo var. makuwa] >TYK25006.1 copper transporter 4 [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 131/138 (94.93%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60
           MKTTSHHNLGAVPPPS ETNPAEK   HKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF
Sbjct: 1   MKTTSHHNLGAVPPPSPETNPAEKTGAHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120
           VLAVMVEWLNSCNFMKQNGESV KVV QTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVWKVVGQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 121 HAVGFVLFKRRGERKDVL 139
           HAVGFVLFK+RGERKDVL
Sbjct: 121 HAVGFVLFKKRGERKDVL 138

[Close]

BLAST of CsaV3_3G034410 vs. NCBI nr
Match: XP_022145715.1 (copper transporter 4 [Momordica charantia])

HSP 1 Score: 225.7 bits (574), Expect = 2.4e-55
Identity = 109/135 (80.74%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60
           +K TS HNLG VPPP+ ETN A K VVHKSLYW HDAQVLFTGWPG +S MYALAVIFVF
Sbjct: 13  LKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVF 72

Query: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120
           VLAV+VEWL  CNFMKQ+ ESV K V+QTAIHAVRTGLSYMVML+VMSFNGGIFLAAVGG
Sbjct: 73  VLAVLVEWLTYCNFMKQSAESVSKAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG 132

Query: 121 HAVGFVLFKRRGERK 136
           HAVGFVLF+ R +RK
Sbjct: 133 HAVGFVLFRARAKRK 147

[Close]

BLAST of CsaV3_3G034410 vs. NCBI nr
Match: XP_023540707.1 (copper transporter 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-54
Identity = 110/140 (78.57%), Postives = 123/140 (87.86%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAE-----KAVVHKSLYWGHDAQVLFTGWPGTNSGMYALA 60
           +KTTSHHNLGAVPPP++ETNPA      K VVHK+LYWGHDAQVLFTGWPGTNS MYALA
Sbjct: 4   LKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYALA 63

Query: 61  VIFVFVLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFL 120
           VIFVFVLAV VEWL   NFMKQ+ ++V  VV+QTAIHAVRTGL+YMV+L+VMSFNGGIFL
Sbjct: 64  VIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGIFL 123

Query: 121 AAVGGHAVGFVLFKRRGERK 136
           AAVGGHAVGFVLF+ R +RK
Sbjct: 124 AAVGGHAVGFVLFRARVKRK 143

[Close]

BLAST of CsaV3_3G034410 vs. NCBI nr
Match: XP_022971334.1 (copper transporter 6-like [Cucurbita maxima])

HSP 1 Score: 221.9 bits (564), Expect = 3.5e-54
Identity = 109/140 (77.86%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAE-----KAVVHKSLYWGHDAQVLFTGWPGTNSGMYALA 60
           +KTTSHHNLG VPPP++E+NPA      K VVHK+LYWGHDAQVLFTGWPGTNS MYALA
Sbjct: 83  LKTTSHHNLGGVPPPAVESNPANTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYALA 142

Query: 61  VIFVFVLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFL 120
           VIFVFVLAV VEWL   NFMKQ+ ++V  VV+Q+AIHAVRTGL YMVML+VMSFNGGIFL
Sbjct: 143 VIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQSAIHAVRTGLKYMVMLSVMSFNGGIFL 202

Query: 121 AAVGGHAVGFVLFKRRGERK 136
           AAVGGHAVGFVLF+ R ERK
Sbjct: 203 AAVGGHAVGFVLFRGRAERK 222

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy Swiss-Prot
Match: Q8SAA5 (Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-30
Identity = 60/117 (51.28%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 21  PAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLAVMVEWLNSC---NFMKQ 80
           P   +++H + YWG++ QVLF+GWPG++ GMYALA+IFVF LA + EWL  C   + +KQ
Sbjct: 24  PHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQ 83

Query: 81  NGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGER 135
             + + KV  +TA++ V++G SY+V+LAV+SFNGG+FLAA+ GHA+GF +F+ R  R
Sbjct: 84  GADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFR 140

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 2.6e-28
Identity = 58/108 (53.70%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 24  KAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLAVMVEWLNSCNFMK-QNGESV 83
           K ++H + +WG + +VLF+GWPGT+SGMYAL +IFVF LAV+ EWL   + ++   G+S 
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 84  GKV--VVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLF 129
            +   ++QTA++ +R GL+Y+VMLAVMSFN G+FL A+ GHAVGF+LF
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLF 146

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 61/126 (48.41%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 6   HHNLGAVPPPSL--ETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLA 65
           H N+    P S+   TN +   ++H + +WG + ++LF+GWPGT+ GMY L +I VF+LA
Sbjct: 3   HGNMPPSSPSSMVNHTN-SNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 62

Query: 66  VMVEWLNSCNFMKQNGE-SVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHA 125
           V+VEWL   + ++  G  S  K +VQTA++ ++TGL+Y+VMLAVMSFNGG+F+ A+ G A
Sbjct: 63  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 122

Query: 126 VGFVLF 129
           VGF+LF
Sbjct: 123 VGFMLF 127

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 57/130 (43.85%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 6   HHNLGAVPPPSLETNPAEK------AVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFV 65
           H ++  +PPPS  ++           ++H + +WG + +VLF+GWPGT+SGMYAL +I +
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 66  FVLAVMVEWLNSCNFMKQNGESVGKV-VVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAV 125
           F+LAV+ EWL     ++ +G +     + QTA++ ++TGLSY+VMLAVMSFN G+F+ A+
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 126 GGHAVGFVLF 129
            G+ VGF LF
Sbjct: 123 AGYGVGFFLF 132

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy Swiss-Prot
Match: Q94EE4 (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-24
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 0


Query: 7   HNLGAVPPPSLETNP-----AEKAV--VHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFV 66
           H++G + PP+          A K++   H + +WG +++VLFT WPGT  GMYALA+IFV
Sbjct: 6   HDMGGMSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFV 65

Query: 67  FVLAVMVEWLNS-----CNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIF 126
           F LAV+VE+L S     C             + + A+H VR G++Y++MLA+MSFNGG+F
Sbjct: 66  FALAVIVEFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVF 125

Query: 127 LAAVGGHAVGFVLFK 130
           L AV GHA GF+ F+
Sbjct: 126 LVAVAGHAAGFLAFR 140

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy TrEMBL
Match: A0A0A0LD01 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_3G733240 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.4e-72
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60
           MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF
Sbjct: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120
           VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 121 HAVGFVLFKRRGERKDVL 139
           HAVGFVLFKRRGERKDVL
Sbjct: 121 HAVGFVLFKRRGERKDVL 138

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy TrEMBL
Match: A0A5A7TLC7 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001240 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.1e-68
Identity = 131/138 (94.93%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60
           MKTTSHHNLGAVPPPS ETNPAEK   HKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF
Sbjct: 1   MKTTSHHNLGAVPPPSPETNPAEKTGAHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60

Query: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120
           VLAVMVEWLNSCNFMKQNGESV KVV QTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG
Sbjct: 61  VLAVMVEWLNSCNFMKQNGESVWKVVGQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120

Query: 121 HAVGFVLFKRRGERKDVL 139
           HAVGFVLFK+RGERKDVL
Sbjct: 121 HAVGFVLFKKRGERKDVL 138

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy TrEMBL
Match: A0A6J1CV92 (Copper transporter OS=Momordica charantia OX=3673 GN=LOC111015103 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.2e-55
Identity = 109/135 (80.74%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVF 60
           +K TS HNLG VPPP+ ETN A K VVHKSLYW HDAQVLFTGWPG +S MYALAVIFVF
Sbjct: 13  LKATSRHNLGTVPPPATETNNAGKTVVHKSLYWSHDAQVLFTGWPGADSAMYALAVIFVF 72

Query: 61  VLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG 120
           VLAV+VEWL  CNFMKQ+ ESV K V+QTAIHAVRTGLSYMVML+VMSFNGGIFLAAVGG
Sbjct: 73  VLAVLVEWLTYCNFMKQSAESVSKAVLQTAIHAVRTGLSYMVMLSVMSFNGGIFLAAVGG 132

Query: 121 HAVGFVLFKRRGERK 136
           HAVGFVLF+ R +RK
Sbjct: 133 HAVGFVLFRARAKRK 147

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy TrEMBL
Match: A0A6J1I894 (Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111470087 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.7e-54
Identity = 109/140 (77.86%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAE-----KAVVHKSLYWGHDAQVLFTGWPGTNSGMYALA 60
           +KTTSHHNLG VPPP++E+NPA      K VVHK+LYWGHDAQVLFTGWPGTNS MYALA
Sbjct: 83  LKTTSHHNLGGVPPPAVESNPANTNNAGKTVVHKTLYWGHDAQVLFTGWPGTNSAMYALA 142

Query: 61  VIFVFVLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFL 120
           VIFVFVLAV VEWL   NFMKQ+ ++V  VV+Q+AIHAVRTGL YMVML+VMSFNGGIFL
Sbjct: 143 VIFVFVLAVFVEWLTYLNFMKQSADNVLTVVLQSAIHAVRTGLKYMVMLSVMSFNGGIFL 202

Query: 121 AAVGGHAVGFVLFKRRGERK 136
           AAVGGHAVGFVLF+ R ERK
Sbjct: 203 AAVGGHAVGFVLFRGRAERK 222

[Close]

BLAST of CsaV3_3G034410 vs. ExPASy TrEMBL
Match: A0A6J1FMA0 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111447095 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.0e-54
Identity = 108/140 (77.14%), Postives = 122/140 (87.14%), Query Frame = 0


Query: 1   MKTTSHHNLGAVPPPSLETNPAE-----KAVVHKSLYWGHDAQVLFTGWPGTNSGMYALA 60
           +KTTSHHNLGAVPPP++ETNPA      K VVHK+LYWGHDAQVLFTGWP TNS MYALA
Sbjct: 4   LKTTSHHNLGAVPPPAVETNPATTNNAGKTVVHKTLYWGHDAQVLFTGWPSTNSAMYALA 63

Query: 61  VIFVFVLAVMVEWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFL 120
           VIFVFVLAV VEWL   NFMK++ ++V  VV+QTAIHAVRTGL+YMV+L+VMSFNGGIFL
Sbjct: 64  VIFVFVLAVFVEWLTYLNFMKESADNVLTVVLQTAIHAVRTGLNYMVILSVMSFNGGIFL 123

Query: 121 AAVGGHAVGFVLFKRRGERK 136
           AAVGGHAVGFVLF+ R +RK
Sbjct: 124 AAVGGHAVGFVLFRARAKRK 143

[Close]

BLAST of CsaV3_3G034410 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-31
Identity = 60/117 (51.28%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 21  PAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLAVMVEWLNSC---NFMKQ 80
           P   +++H + YWG++ QVLF+GWPG++ GMYALA+IFVF LA + EWL  C   + +KQ
Sbjct: 24  PHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQ 83

Query: 81  NGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGER 135
             + + KV  +TA++ V++G SY+V+LAV+SFNGG+FLAA+ GHA+GF +F+ R  R
Sbjct: 84  GADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFR 140

[Close]

BLAST of CsaV3_3G034410 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 58/108 (53.70%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 24  KAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLAVMVEWLNSCNFMK-QNGESV 83
           K ++H + +WG + +VLF+GWPGT+SGMYAL +IFVF LAV+ EWL   + ++   G+S 
Sbjct: 39  KMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSA 98

Query: 84  GKV--VVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLF 129
            +   ++QTA++ +R GL+Y+VMLAVMSFN G+FL A+ GHAVGF+LF
Sbjct: 99  NRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLF 146

[Close]

BLAST of CsaV3_3G034410 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 124.4 bits (311), Expect = 7.1e-29
Identity = 61/126 (48.41%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 6   HHNLGAVPPPSL--ETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLA 65
           H N+    P S+   TN +   ++H + +WG + ++LF+GWPGT+ GMY L +I VF+LA
Sbjct: 3   HGNMPPSSPSSMVNHTN-SNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLA 62

Query: 66  VMVEWLNSCNFMKQNGE-SVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHA 125
           V+VEWL   + ++  G  S  K +VQTA++ ++TGL+Y+VMLAVMSFNGG+F+ A+ G A
Sbjct: 63  VIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 122

Query: 126 VGFVLF 129
           VGF+LF
Sbjct: 123 VGFMLF 127

[Close]

BLAST of CsaV3_3G034410 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 120.9 bits (302), Expect = 7.9e-28
Identity = 57/130 (43.85%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 6   HHNLGAVPPPSLETNPAEK------AVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFV 65
           H ++  +PPPS  ++           ++H + +WG + +VLF+GWPGT+SGMYAL +I +
Sbjct: 3   HDHMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVI 62

Query: 66  FVLAVMVEWLNSCNFMKQNGESVGKV-VVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAV 125
           F+LAV+ EWL     ++ +G +     + QTA++ ++TGLSY+VMLAVMSFN G+F+ A+
Sbjct: 63  FLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAI 122

Query: 126 GGHAVGFVLF 129
            G+ VGF LF
Sbjct: 123 AGYGVGFFLF 132

[Close]

BLAST of CsaV3_3G034410 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 55/128 (42.97%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 11  AVPPPS----LETNPAEKAVVHKSLYWGHDAQVLFTGWPGTNSGMYALAVIFVFVLAVMV 70
           A P PS     +       ++H + +WG   +VLF GWPGT+  MY + +  +FV++   
Sbjct: 10  AAPAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFS 69

Query: 71  EWLNSCNFMKQNGESVGKVVVQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFV 130
           E L+ C FMK    S+G  ++QTA++ VR  LSY+VMLAVMSFNGG+F+AA+ G  +GF+
Sbjct: 70  ECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFM 129

Query: 131 LFKRRGER 135
           +F  R  R
Sbjct: 130 IFGSRAFR 137

The following BLAST results are available for this feature:

BLAST of CsaV3_3G034410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137921.2	2.9e-72	100.00	copper transporter 4 [Cucumis sativus] >KGN58819.1 hypothetical protein Csa_0015...	[more]
KAA0044132.1	1.3e-67	94.93	copper transporter 4 [Cucumis melo var. makuwa] >TYK25006.1 copper transporter 4...	[more]
XP_022145715.1	2.4e-55	80.74	copper transporter 4 [Momordica charantia]	[more]
XP_023540707.1	2.1e-54	78.57	copper transporter 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971334.1	3.5e-54	77.86	copper transporter 6-like [Cucurbita maxima]	[more]

BLAST of CsaV3_3G034410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8SAA5	2.2e-30	51.28	Copper transporter 4 OS=Arabidopsis thaliana OX=3702 GN=COPT4 PE=2 SV=2	[more]
Q39065	2.6e-28	53.70	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q8GWP3	1.0e-27	48.41	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q9STG2	1.1e-26	43.85	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q94EE4	1.0e-24	44.44	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]

BLAST of CsaV3_3G034410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LD01	1.4e-72	100.00	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_3G733240 PE=3 SV=1	[more]
A0A5A7TLC7	6.1e-68	94.93	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A6J1CV92	1.2e-55	80.74	Copper transporter OS=Momordica charantia OX=3673 GN=LOC111015103 PE=3 SV=1	[more]
A0A6J1I894	1.7e-54	77.86	Copper transporter OS=Cucurbita maxima OX=3661 GN=LOC111470087 PE=3 SV=1	[more]
A0A6J1FMA0	5.0e-54	77.14	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111447095 PE=3 SV=1	[more]

BLAST of CsaV3_3G034410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37925.1	1.5e-31	51.28	copper transporter 4	[more]
AT5G59030.1	1.9e-29	53.70	copper transporter 1	[more]
AT2G26975.1	7.1e-29	48.41	Ctr copper transporter family	[more]
AT3G46900.1	7.9e-28	43.85	copper transporter 2	[more]
AT5G59040.1	1.6e-25	42.97	copper transporter 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 86..128 e-value: 6.6E-12 score: 46.2 coord: 33..73 e-value: 1.3E-7 score: 32.3
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 2..135
None	No IPR available	PANTHER	PTHR12483:SF94	COPPER TRANSPORTER 4	coord: 2..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G034410.1	CsaV3_3G034410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity