CsaV3_3G033430 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G033430
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 28734225 .. 28735110 (+)
RNA-Seq ExpressionCsaV3_3G033430
SyntenyCsaV3_3G033430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCGCCGCGATAGAGAAATCGCCAACCCGTAAACGGAACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAAAACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAACAGGGAATTGGTTAGAAGATGATATTGTATAATTGATGAAGAATAGTACTCGTAATCTTGATGAAGAGTATGGGAGGACACTGTTTAGCCTGTGAATGGTCGGAATGTAGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGCTTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCTGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCAATATTGAGAACAGTATCAGCAAAGATTTTGATTATTGGCTGTATTGCTAGAAAAAGGAGAAAGATGTTTTGATCGTGCAATGACAAGGCCGAATAATGCACCACCTGTTTCAAATGTTAGGTAGTAATTTAAACAACTTTCGTATAGCCATTTTTGAAATTATTGGAACACCGGTGATGGGTCGTTTTAAGTGAATTATGCGTGTGTACTGAGGTCTAAATTTATAGAATGGAGTTAAATCATATGCAAAAATATGTATACGAATAATAATAGTCGATGGAACAATGAAAGAAGAAAGAGATGGTTTTAAATAGATGGGAACTTGGGCTTGGAGCCCAAGCTTGGATCTACTTTACGATCCAAGTGCGGACTGGGGTGGGACAAATGGTTTGAACCCAAACGAACCATTTTAA

mRNA sequence

ATGGATAGCGCCGCGATAGAGAAATCGCCAACCCGTAAACGGAACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAAAACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAACAGGGAATTGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGCTTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCTGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCAATATTGAGAACAAAAAAGGAGAAAGATGTTTTGATCGTGCAATGACAAGGCCGAATAATGCACCACCTGTTTCAAATATGGGAACTTGGGCTTGGAGCCCAAGCTTGGATCTACTTTACGATCCAAGTGCGGACTGGGGTGGGACAAATGGTTTGAACCCAAACGAACCATTTTAA

Coding sequence (CDS)

ATGGATAGCGCCGCGATAGAGAAATCGCCAACCCGTAAACGGAACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAAAACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAACAGGGAATTGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGCTTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCTGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCAATATTGAGAACAAAAAAGGAGAAAGATGTTTTGATCGTGCAATGACAAGGCCGAATAATGCACCACCTGTTTCAAATATGGGAACTTGGGCTTGGAGCCCAAGCTTGGATCTACTTTACGATCCAAGTGCGGACTGGGGTGGGACAAATGGTTTGAACCCAAACGAACCATTTTAA

Protein sequence

MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPIEDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNEPF*
Homology
[Close]
BLAST of CsaV3_3G033430 vs. NCBI nr
Match: KAE8650975.1 (hypothetical protein Csa_001201 [Cucumis sativus])

HSP 1 Score: 377.9 bits (969), Expect = 5.1e-101
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0 

Query: 1   MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 60
           MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT
Sbjct: 1   MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 60

Query: 61  VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 120
           VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI
Sbjct: 61  VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 120

Query: 121 EDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNE 180
           EDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNE
Sbjct: 121 EDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNE 180

Query: 181 PF 183
           PF
Sbjct: 181 PF 182

[Close]
BLAST of CsaV3_3G033430 vs. ExPASy TrEMBL
Match: A0A0A0LA48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730870 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.2e-65
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 60
           MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT
Sbjct: 60  MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 119

Query: 61  VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 120
           VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI
Sbjct: 120 VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 179

Query: 121 EDWGNIEN 129
           EDWGNIEN
Sbjct: 180 EDWGNIEN 187

The following BLAST results are available for this feature:
BLAST of CsaV3_3G033430 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650975.15.1e-101100.00hypothetical protein Csa_001201 [Cucumis sativus][more]
BLAST of CsaV3_3G033430 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G033430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA488.2e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730870 PE=4 SV=1[more]
BLAST of CsaV3_3G033430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G033430.1CsaV3_3G033430.1mRNA