CsaV3_3G033330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G033330
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 28696811 .. 28697032 (-)
RNA-Seq ExpressionCsaV3_3G033330
SyntenyCsaV3_3G033330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGGGCAGTTTGGAGTTTTACCAACGGCTACCACTCGGCGGTTGCTTTGCTTTGGTTTAGTCGTCTACTGCTCACTCCCCGCTGCCTTTGGTCACTTCAATCTATACTTTGTCTTCTTCTTACGCTTTGCTACATACGCTCTTCGCCCGTGATGCTGATCCATCCCATATTGGTCAATTTGGAGGCAAACCCAAAAGCTACTTACCTCTTAAACTGA

mRNA sequence

ATGAGAGGGGCAGTTTGGAGTTTTACCAACGGCTACCACTCGGCGGTTGCTTTGCTTTGGTTTAGTCGTCTACTGCTCACTCCCCGCTGCCTTTGGTCACTTCAATCTATACTTTGTCTTCTTCTTACGCTTTGCTACATACGCTCTTCGCCCGTGATGCTGATCCATCCCATATTGGTCAATTTGGAGGCAAACCCAAAAGCTACTTACCTCTTAAACTGA

Coding sequence (CDS)

ATGAGAGGGGCAGTTTGGAGTTTTACCAACGGCTACCACTCGGCGGTTGCTTTGCTTTGGTTTAGTCGTCTACTGCTCACTCCCCGCTGCCTTTGGTCACTTCAATCTATACTTTGTCTTCTTCTTACGCTTTGCTACATACGCTCTTCGCCCGTGATGCTGATCCATCCCATATTGGTCAATTTGGAGGCAAACCCAAAAGCTACTTACCTCTTAAACTGA

Protein sequence

MRGAVWSFTNGYHSAVALLWFSRLLLTPRCLWSLQSILCLLLTLCYIRSSPVMLIHPILVNLEANPKATYLLN*
Homology
[Close]
BLAST of CsaV3_3G033330 vs. NCBI nr
Match: KGN58714.1 (hypothetical protein Csa_001002 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 3.4e-32
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MRGAVWSFTNGYHSAVALLWFSRLLLTPRCLWSLQSILCLLLTLCYIRSSPVMLIHPILV 60
          MRGAVWSFTNGYHSAVALLWFSRLLLTPRCLWSLQSILCLLLTLCYIRSSPVMLIHPILV
Sbjct: 1  MRGAVWSFTNGYHSAVALLWFSRLLLTPRCLWSLQSILCLLLTLCYIRSSPVMLIHPILV 60

Query: 61 NLEANPKATYLLN 74
          NLEANPKATYLLN
Sbjct: 61 NLEANPKATYLLN 73

[Close]
BLAST of CsaV3_3G033330 vs. ExPASy TrEMBL
Match: A0A0A0LCN5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730780 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-32
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MRGAVWSFTNGYHSAVALLWFSRLLLTPRCLWSLQSILCLLLTLCYIRSSPVMLIHPILV 60
          MRGAVWSFTNGYHSAVALLWFSRLLLTPRCLWSLQSILCLLLTLCYIRSSPVMLIHPILV
Sbjct: 1  MRGAVWSFTNGYHSAVALLWFSRLLLTPRCLWSLQSILCLLLTLCYIRSSPVMLIHPILV 60

Query: 61 NLEANPKATYLLN 74
          NLEANPKATYLLN
Sbjct: 61 NLEANPKATYLLN 73

The following BLAST results are available for this feature:
BLAST of CsaV3_3G033330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58714.13.4e-32100.00hypothetical protein Csa_001002 [Cucumis sativus][more]
BLAST of CsaV3_3G033330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G033330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCN51.7e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730780 PE=4 SV=1[more]
BLAST of CsaV3_3G033330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G033330.1CsaV3_3G033330.1mRNA