CsaV3_3G031680 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G031680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Dihydroorotate dehydrogenase, putative
Location	chr3: 27420464 .. 27422147 (-)
RNA-Seq Expression	CsaV3_3G031680
Synteny	CsaV3_3G031680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACCAGAATGAGGAACAAAATTCTGCACCTACCGAAGAGTTTGTTTACAGAATCAGTACCTCCAAGGAGTGGGATGAATCACACCGCCTTGGTCATATCTGTGGAGGACACCTCGACAAATCTTCCGGTTTCATTCATCTCAGTAACCTCGATCAGGTTCTCTCTCTCTCTCTCCTTCTCTAATCTCATCACATTCTCTTATTTCCTCTCCTATACGACAATTTTGCTCTTTCCACAAACCATATTTCCTCATTTCAGCTTGCAATGTGTTTGCTTAATCCTACCCTTTCTTTCGCTTCATCTGATATAGGGTAAACCCTGTTTTAATTATATATATATAACAACTCTTTTCATGCTACACTTATCGGTCCAAGGTACTAAACTGACGTAAAAGTAGTTTGCAAGGTGAAATTGAAAGCCAACTTAGAGAATTCAAATGTAGTTTCACCAAATTGGAATTTAGCGGCATGAGACTATTATAGAGTCAATATCCATCGCTTAATTTGGTTGCCCAGTCAAATTTTATGCATTCGCCAGTTCTTATTTTAAAGCCTTAACTTTAGGAAAGAACCAAAGTTTAAATGACAGATGATGAATTGTCATGCAGGTCCAGTCAACTTTGCAGAATTTCTTCCTGAATATCAAAGATGAATTGTATCTCCTTCAAATTGAGGCCAAAAAGGTACAGAGATGCCTTTCCTTTTTTCTCTCGTGTCTGCATTGTGCGATTAATATAAAAGGGTAGAAGATAAATTTCTAGTGATTTGTACTGTCCCTTGGCTTCAAAAACTGTGATCGTGCAAGCTAGCGTATAAGTCATAACCATCTAGTTTGTTGACTCCACCATGGAACTCGATGGATATACATATTACCAAATTATATCCTTCATCAAATATCATTAGTTTAAGGCCCTGGTTATACTAAAAAACTTTGTGGCTCGTATTGGAAATGTTCTTAAGAATGCTGTCCCAGTACTCAATAGTCATCTTCTGTTATTGAAAGATAGCTAAAGCTTTATAGACATTCAGTTTGACAAGAGTAAATGAAACAAACTTAGTTTATATGGTCCATGACTCCCTGTAGTTTCAAATGTCTAAATTTAGTTCATGTACATTCAATAAAACATAAAATGAGTCCGTAGTTAGTGTTGGTTTGAAGTGAGTTTTTCTCAAATTTGATCAACAACAATTATAATAATTTCCGGTCAAGAAAAGACACAATGAGAACGTTCCCAAGATTTATGAGTGAAGGCTAGTGGAGACTCTTTTTTAATAACACTAAACCAACAGTAGGGAACATTTTTAAGATTTATTGAAAGACTGGGGACTAAATTTGGATATTTAAAAGTATAGACTTAAACTGAACAAGTCTCTAACCACAAAAATTTTATTATCACTGAGACTTTGGCCTATTTTTCCATTTTACATGTTATAAACGTTTGGCCTTTTTTCCATTTTACATGTTTTTACATCGTCTATAATTATATTTGGTATTACATTAATCTTTTTCTTTGCAGCTTGGTGATGGATTGATTTATGAACTTGTTGATGGTTGCAATAGCTTTCCTCATTTCTATGGCCCGTCACGAAGCTTCAGCCCTATCCCTATGGATGCAGTAACAAATTCAGATAAAATAACTTTTTCTGATGGTCGATTTGCATGTAGTTTACTCGAATAG

mRNA sequence

ATGGCAGACCAGAATGAGGAACAAAATTCTGCACCTACCGAAGAGTTTGTTTACAGAATCAGTACCTCCAAGGAGTGGGATGAATCACACCGCCTTGGTCATATCTGTGGAGGACACCTCGACAAATCTTCCGGTTTCATTCATCTCAGTAACCTCGATCAGGTCCAGTCAACTTTGCAGAATTTCTTCCTGAATATCAAAGATGAATTGTATCTCCTTCAAATTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTTGATGGTTGCAATAGCTTTCCTCATTTCTATGGCCCGTCACGAAGCTTCAGCCCTATCCCTATGGATGCAGTAACAAATTCAGATAAAATAACTTTTTCTGATGGTCGATTTGCATGTAGTTTACTCGAATAG

Coding sequence (CDS)

ATGGCAGACCAGAATGAGGAACAAAATTCTGCACCTACCGAAGAGTTTGTTTACAGAATCAGTACCTCCAAGGAGTGGGATGAATCACACCGCCTTGGTCATATCTGTGGAGGACACCTCGACAAATCTTCCGGTTTCATTCATCTCAGTAACCTCGATCAGGTCCAGTCAACTTTGCAGAATTTCTTCCTGAATATCAAAGATGAATTGTATCTCCTTCAAATTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTTGATGGTTGCAATAGCTTTCCTCATTTCTATGGCCCGTCACGAAGCTTCAGCCCTATCCCTATGGATGCAGTAACAAATTCAGATAAAATAACTTTTTCTGATGGTCGATTTGCATGTAGTTTACTCGAATAG

Protein sequence

MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKITFSDGRFACSLLE*

Homology

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BLAST of CsaV3_3G031680 vs. NCBI nr
Match: XP_004150836.1 (uncharacterized protein LOC101207691 [Cucumis sativus] >KGN58541.1 hypothetical protein Csa_000840 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 2.6e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60
           MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ
Sbjct: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60

Query: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120
           NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT
Sbjct: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120

Query: 121 FSDGRFACSLLE 133
           FSDGRFACSLLE
Sbjct: 121 FSDGRFACSLLE 132

[Close]

BLAST of CsaV3_3G031680 vs. NCBI nr
Match: XP_008447457.1 (PREDICTED: uncharacterized protein LOC103489901 [Cucumis melo] >KAA0038110.1 uncharacterized protein E6C27_scaffold36G003310 [Cucumis melo var. makuwa] >TYK20497.1 uncharacterized protein E5676_scaffold237G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 250.4 bits (638), Expect = 8.9e-63
Identity = 120/132 (90.91%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60
           MADQNE++NSA TEEFVYRISTSKEWDES RLGHI GGHLDKSSGFIHLSNL+QVQSTLQ
Sbjct: 1   MADQNEDENSAATEEFVYRISTSKEWDESQRLGHIYGGHLDKSSGFIHLSNLNQVQSTLQ 60

Query: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120
           NFFLN+KD+LYLLQIEAKKLGDGLIYELVDG NSFPHFYGPSRSFSPIPMDAVT +DKIT
Sbjct: 61  NFFLNVKDQLYLLQIEAKKLGDGLIYELVDGYNSFPHFYGPSRSFSPIPMDAVTKADKIT 120

Query: 121 FSDGRFACSLLE 133
           FSDGRF+CSLLE
Sbjct: 121 FSDGRFSCSLLE 132

[Close]

BLAST of CsaV3_3G031680 vs. NCBI nr
Match: XP_038905017.1 (uncharacterized protein LOC120091189 [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 3.9e-58
Identity = 113/132 (85.61%), Postives = 120/132 (90.91%), Query Frame = 0


Query: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60
           MA QNEE+ SA TE+FVYRISTSKEWDES R+GHI GG  DKSSGFIHLSNL+QVQSTLQ
Sbjct: 1   MAGQNEEEKSAATEDFVYRISTSKEWDESQRVGHIYGGDFDKSSGFIHLSNLNQVQSTLQ 60

Query: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120
           NFFLNIKDELYLLQIEAKKLGDGLIYELVDG NSFPHFYGPSRSF PIPMDAVT ++K+T
Sbjct: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGSNSFPHFYGPSRSFRPIPMDAVTKAEKLT 120

Query: 121 FSDGRFACSLLE 133
           FSDGRF CS LE
Sbjct: 121 FSDGRFTCSFLE 132

[Close]

BLAST of CsaV3_3G031680 vs. NCBI nr
Match: XP_022948943.1 (uncharacterized protein LOC111452443 [Cucurbita moschata])

HSP 1 Score: 211.5 bits (537), Expect = 4.6e-51
Identity = 102/134 (76.12%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MADQNEEQNSAP--TEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQST 60
           MA ++E++ SAP   EEFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQST
Sbjct: 1   MAGEDEQRGSAPAVAEEFVYRISPSKEWEHSQSVGYLHGGDFDTSSGFIHLSNLNQVQST 60

Query: 61  LQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDK 120
           LQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHFYGPSRSFSPIP+DAVT ++K
Sbjct: 61  LQNFFLNSKEELYLLQIEAKKLGDGLVYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEK 120

Query: 121 ITFSDGRFACSLLE 133
           +TFSDGRFACS LE
Sbjct: 121 LTFSDGRFACSFLE 134

[Close]

BLAST of CsaV3_3G031680 vs. NCBI nr
Match: KAG6606920.1 (hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036624.1 hypothetical protein SDJN02_00243 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50
Identity = 102/134 (76.12%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MADQNEEQNSAP--TEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQST 60
           MA ++E+  SAP   EEFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQST
Sbjct: 1   MAGEDEQGGSAPAVAEEFVYRISPSKEWEHSQSVGYLHGGDFDTSSGFIHLSNLNQVQST 60

Query: 61  LQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDK 120
           LQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHFYGPSRSFSPIP+DAVT ++K
Sbjct: 61  LQNFFLNSKEELYLLQIEAKKLGDGLVYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEK 120

Query: 121 ITFSDGRFACSLLE 133
           +TFSDGRFACS LE
Sbjct: 121 LTFSDGRFACSFLE 134

[Close]

BLAST of CsaV3_3G031680 vs. ExPASy TrEMBL
Match: A0A0A0LER0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G669610 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60
           MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ
Sbjct: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60

Query: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120
           NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT
Sbjct: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120

Query: 121 FSDGRFACSLLE 133
           FSDGRFACSLLE
Sbjct: 121 FSDGRFACSLLE 132

[Close]

BLAST of CsaV3_3G031680 vs. ExPASy TrEMBL
Match: A0A5D3DA97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00710 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.3e-63
Identity = 120/132 (90.91%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60
           MADQNE++NSA TEEFVYRISTSKEWDES RLGHI GGHLDKSSGFIHLSNL+QVQSTLQ
Sbjct: 1   MADQNEDENSAATEEFVYRISTSKEWDESQRLGHIYGGHLDKSSGFIHLSNLNQVQSTLQ 60

Query: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120
           NFFLN+KD+LYLLQIEAKKLGDGLIYELVDG NSFPHFYGPSRSFSPIPMDAVT +DKIT
Sbjct: 61  NFFLNVKDQLYLLQIEAKKLGDGLIYELVDGYNSFPHFYGPSRSFSPIPMDAVTKADKIT 120

Query: 121 FSDGRFACSLLE 133
           FSDGRF+CSLLE
Sbjct: 121 FSDGRFSCSLLE 132

[Close]

BLAST of CsaV3_3G031680 vs. ExPASy TrEMBL
Match: A0A1S3BHG9 (uncharacterized protein LOC103489901 OS=Cucumis melo OX=3656 GN=LOC103489901 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.3e-63
Identity = 120/132 (90.91%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MADQNEEQNSAPTEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQ 60
           MADQNE++NSA TEEFVYRISTSKEWDES RLGHI GGHLDKSSGFIHLSNL+QVQSTLQ
Sbjct: 1   MADQNEDENSAATEEFVYRISTSKEWDESQRLGHIYGGHLDKSSGFIHLSNLNQVQSTLQ 60

Query: 61  NFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKIT 120
           NFFLN+KD+LYLLQIEAKKLGDGLIYELVDG NSFPHFYGPSRSFSPIPMDAVT +DKIT
Sbjct: 61  NFFLNVKDQLYLLQIEAKKLGDGLIYELVDGYNSFPHFYGPSRSFSPIPMDAVTKADKIT 120

Query: 121 FSDGRFACSLLE 133
           FSDGRF+CSLLE
Sbjct: 121 FSDGRFSCSLLE 132

[Close]

BLAST of CsaV3_3G031680 vs. ExPASy TrEMBL
Match: A0A6J1GAQ2 (uncharacterized protein LOC111452443 OS=Cucurbita moschata OX=3662 GN=LOC111452443 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.2e-51
Identity = 102/134 (76.12%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 1   MADQNEEQNSAP--TEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQST 60
           MA ++E++ SAP   EEFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQST
Sbjct: 1   MAGEDEQRGSAPAVAEEFVYRISPSKEWEHSQSVGYLHGGDFDTSSGFIHLSNLNQVQST 60

Query: 61  LQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDK 120
           LQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHFYGPSRSFSPIP+DAVT ++K
Sbjct: 61  LQNFFLNSKEELYLLQIEAKKLGDGLVYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEK 120

Query: 121 ITFSDGRFACSLLE 133
           +TFSDGRFACS LE
Sbjct: 121 LTFSDGRFACSFLE 134

[Close]

BLAST of CsaV3_3G031680 vs. ExPASy TrEMBL
Match: A0A6J1K865 (uncharacterized protein LOC111493116 OS=Cucurbita maxima OX=3661 GN=LOC111493116 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.4e-51
Identity = 102/134 (76.12%), Postives = 116/134 (86.57%), Query Frame = 0


Query: 1   MADQNEEQNSAP--TEEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQST 60
           MA Q+E+  SAP   EEFVYRIS SKEW+ S  +G++ GG  D SSGFIHLSNL+QVQST
Sbjct: 1   MAGQDEQGGSAPAVAEEFVYRISPSKEWEHSQSVGYLHGGDFDTSSGFIHLSNLNQVQST 60

Query: 61  LQNFFLNIKDELYLLQIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDK 120
           LQNFFLN K+ELYLLQIEAKKLGDGL+YELVDG NSFPHFYGPSRSFSPIP+DAVT ++K
Sbjct: 61  LQNFFLNSKEELYLLQIEAKKLGDGLVYELVDGSNSFPHFYGPSRSFSPIPIDAVTKAEK 120

Query: 121 ITFSDGRFACSLLE 133
           +TFSDG+FACS LE
Sbjct: 121 LTFSDGQFACSFLE 134

[Close]

BLAST of CsaV3_3G031680 vs. TAIR 10
Match: AT4G01897.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). )

HSP 1 Score: 157.9 bits (398), Expect = 5.6e-39
Identity = 69/118 (58.47%), Postives = 92/118 (77.97%), Query Frame = 0


Query: 14  EEFVYRISTSKEWDESHRLGHICGGHLDKSSGFIHLSNLDQVQSTLQNFFLNIKDELYLL 73
           EEF+YRIST +EW+E  + G   G  +DKS+ + HLS LDQVQ TL+NFF+++K+ LYLL
Sbjct: 4   EEFIYRISTEQEWEEFKKNGSSYGAEIDKSTCYYHLSKLDQVQLTLKNFFVDVKEYLYLL 63

Query: 74  QIEAKKLGDGLIYELVDGCNSFPHFYGPSRSFSPIPMDAVTNSDKITFSDGRFACSLL 132
           Q++ KKLGDGLIYE VD  NSFPHFYGP ++F P+P+D+V  ++K+TF +G F CS L
Sbjct: 64  QVDPKKLGDGLIYEAVDEVNSFPHFYGPDKTFVPLPLDSVVKAEKLTFINGNFTCSFL 121

The following BLAST results are available for this feature:

BLAST of CsaV3_3G031680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150836.1	2.6e-70	100.00	uncharacterized protein LOC101207691 [Cucumis sativus] >KGN58541.1 hypothetical ...	[more]
XP_008447457.1	8.9e-63	90.91	PREDICTED: uncharacterized protein LOC103489901 [Cucumis melo] >KAA0038110.1 unc...	[more]
XP_038905017.1	3.9e-58	85.61	uncharacterized protein LOC120091189 [Benincasa hispida]	[more]
XP_022948943.1	4.6e-51	76.12	uncharacterized protein LOC111452443 [Cucurbita moschata]	[more]
KAG6606920.1	1.0e-50	76.12	hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_3G031680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G031680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LER0	1.2e-70	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G669610 PE=4 SV=1	[more]
A0A5D3DA97	4.3e-63	90.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHG9	4.3e-63	90.91	uncharacterized protein LOC103489901 OS=Cucumis melo OX=3656 GN=LOC103489901 PE=...	[more]
A0A6J1GAQ2	2.2e-51	76.12	uncharacterized protein LOC111452443 OS=Cucurbita moschata OX=3662 GN=LOC1114524...	[more]
A0A6J1K865	6.4e-51	76.12	uncharacterized protein LOC111493116 OS=Cucurbita maxima OX=3661 GN=LOC111493116...	[more]

BLAST of CsaV3_3G031680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01897.1	5.6e-39	58.47	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.170.20	Protein of unknown function DUF952	coord: 15..130 e-value: 4.9E-26 score: 92.7
None	No IPR available	SUPERFAMILY	56399	ADP-ribosylation	coord: 16..124
IPR009297	Protein of unknown function DUF952	PFAM	PF06108	DUF952	coord: 21..114 e-value: 3.1E-22 score: 78.4
IPR009297	Protein of unknown function DUF952	PANTHER	PTHR34129	BLR1139 PROTEIN	coord: 10..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G031680.1	CsaV3_3G031680.1	mRNA