CsaV3_3G027560 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G027560
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 23852338 .. 23853584 (+)
RNA-Seq ExpressionCsaV3_3G027560
SyntenyCsaV3_3G027560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATTGCCTCCACCTCTTAGCTATTTTCGTGCCAATAGGTGAGAACTCATTTCTTGGCTGATTGAGTAAAAAAAGTTCCATTTTCGTCTTATTGGATTGGACCTTAAATTAAAGATGGTTATATAAATGCCTTCTTCTAGTTGAGGTATTTTACGTTTTGGAGATTAGTGTTTGTTTAGGTTGCGTTTGAGTATTTTTGTCTTGGATTGAGTATCCTTTTGGCTGGCTTGAGGTTGCGGGTGCTTCATGTACTTCAAAACTATCGTTCTTGGGACAGACATAACATAAAAATACAAAAGCACTTCAAATGCTTTATAAATGCAGAAATAAATGTAAAACTGATTTGTTATCAAGAACTTTAACTATACTTTTACTTAAAAGTATTTTCGCTAAAAGCACTGGATTCTTATTGTCAAAAAAATACATCTAACAACCTATCTTCACATACCGTTTTCTTTTCGGTTCTTTAAAAGAATTACATGTGATTTCTCTTTGGAGTTGGGAGCTATATCAACTTTTTTATTGCTGATTAATGAAACTCTCTGCAGTTTGAAGTTCATAACTAACACCTGCTCTGTTCTTATTTGTCGAAACCTTGCTCCTTGTTGGCTTGGTAATTTTGCCTTAATTTGATGACGATTTGTTTTTAGTTTTACATTTTAAAAGGTACGTTTGTTTTCTCACCAATTTTGTAATATGGTTTTCAATTTCCACATTAAATAAAAAATTGAGTTCTTATCCAAATTAAGAATACTAAAATTAACTGCGTGTTTAATTTTCAAAACTTGCCTTGTTTTATGGAAAACAGTGAAAGGGAACAACAGAACAAATAAATTTATATGGGGAAATGATGTTACTAATAAACTAGAACCAAATAGTTATGAAATAGGATCTTAATTCATTTATTTATTTTTGAAACAGGTATTTACTATTCTTATTACCATGGAGTTCTAGTGCCAACACAAAGGAGGTTCATTTCTCTTTTGCCTGGTCCATTTGTTTCCTCTTAGTACTAGTCCCATCCATTTTCTTCTGAGCGGCTGAGCCTCTGCTATTATAGAGTCAAATACAGGTGATATGACCATTCTTGAAGCAAGCAGTTAAGAAATCTCCTTTTATGCTTTATGGAACTCGAAGCTGAACATGCAAAAAATATTGAGGAGACTATAGTTGATGCAGGGGAGAGCTTGAAGTTGAAGGGTCTTGTTCGATGGAAGCGCTTGAGCTTTTTAGGGATACTTTGA

mRNA sequence

ATGGTATTGCCTCCACCTCTTAGCTATTTTCGTGCCAATAGGTATTTACTATTCTTATTACCATGGAGTTCTAGTGCCAACACAAAGGAGTTAAGAAATCTCCTTTTATGCTTTATGGAACTCGAAGCTGAACATGCAAAAAATATTGAGGAGACTATAGTTGATGCAGGGGAGAGCTTGAAGTTGAAGGGTCTTGTTCGATGGAAGCGCTTGAGCTTTTTAGGGATACTTTGA

Coding sequence (CDS)

ATGGTATTGCCTCCACCTCTTAGCTATTTTCGTGCCAATAGGTATTTACTATTCTTATTACCATGGAGTTCTAGTGCCAACACAAAGGAGTTAAGAAATCTCCTTTTATGCTTTATGGAACTCGAAGCTGAACATGCAAAAAATATTGAGGAGACTATAGTTGATGCAGGGGAGAGCTTGAAGTTGAAGGGTCTTGTTCGATGGAAGCGCTTGAGCTTTTTAGGGATACTTTGA

Protein sequence

MVLPPPLSYFRANRYLLFLLPWSSSANTKELRNLLLCFMELEAEHAKNIEETIVDAGESLKLKGLVRWKRLSFLGIL*
Homology
[Close]
BLAST of CsaV3_3G027560 vs. NCBI nr
Match: KGN58225.1 (hypothetical protein Csa_017511 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MVLPPPLSYFRANRYLLFLLPWSSSANTKELRNLLLCFMELEAEHAKNIEETIVDAGESL 60
          MVLPPPLSYFRANRYLLFLLPWSSSANTKELRNLLLCFMELEAEHAKNIEETIVDAGESL
Sbjct: 1  MVLPPPLSYFRANRYLLFLLPWSSSANTKELRNLLLCFMELEAEHAKNIEETIVDAGESL 60

Query: 61 KLKGLVRWKRLSFLGIL 78
          KLKGLVRWKRLSFLGIL
Sbjct: 61 KLKGLVRWKRLSFLGIL 77

[Close]
BLAST of CsaV3_3G027560 vs. ExPASy TrEMBL
Match: A0A0A0L8F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596250 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MVLPPPLSYFRANRYLLFLLPWSSSANTKELRNLLLCFMELEAEHAKNIEETIVDAGESL 60
          MVLPPPLSYFRANRYLLFLLPWSSSANTKELRNLLLCFMELEAEHAKNIEETIVDAGESL
Sbjct: 1  MVLPPPLSYFRANRYLLFLLPWSSSANTKELRNLLLCFMELEAEHAKNIEETIVDAGESL 60

Query: 61 KLKGLVRWKRLSFLGIL 78
          KLKGLVRWKRLSFLGIL
Sbjct: 61 KLKGLVRWKRLSFLGIL 77

The following BLAST results are available for this feature:
BLAST of CsaV3_3G027560 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58225.12.3e-34100.00hypothetical protein Csa_017511 [Cucumis sativus][more]
BLAST of CsaV3_3G027560 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G027560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8F01.1e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G596250 PE=4 SV=1[more]
BLAST of CsaV3_3G027560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G027560.1CsaV3_3G027560.1mRNA