CsaV3_3G027520 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G027520
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 23831612 .. 23831761 (-)
RNA-Seq ExpressionCsaV3_3G027520
SyntenyCsaV3_3G027520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAGTTTTGTGGAGATGAATTTGGTGCCGTGGATTAGTAAGACTCTACGTAGTTTGGGGAGGACGTGGAGGAGTGTGGAGCGTCCAATGGAGTGGCAGCGTGGACCAATCTTGGAACAGCCATTTTTGCCGCCATGGGAGCGTGGGCGT

mRNA sequence

AAGAGTTTTGTGGAGATGAATTTGGTGCCGTGGATTAGTAAGACTCTACGTAGTTTGGGGAGGACGTGGAGGAGTGTGGAGCGTCCAATGGAGTGGCAGCGTGGACCAATCTTGGAACAGCCATTTTTGCCGCCATGGGAGCGTGGGCGT

Coding sequence (CDS)

AAGAGTTTTGTGGAGATGAATTTGGTGCCGTGGATTAGTAAGACTCTACGTAGTTTGGGGAGGACGTGGAGGAGTGTGGAGCGTCCAATGGAGTGGCAGCGTGGACCAATCTTGGAACAGCCATTTTTGCCGCCATGGGAGCGTGGGCGT

Protein sequence

KSFVEMNLVPWISKTLRSLGRTWRSVERPMEWQRGPILEQPFLPPWERGR
Homology
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BLAST of CsaV3_3G027520 vs. NCBI nr
Match: KAE8650791.1 (hypothetical protein Csa_017574, partial [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.4e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  KSFVEMNLVPWISKTLRSLGRTWRSVERPMEWQRGPILEQPFLPPWERGR 51
          KSFVEMNLVPWISKTLRSLGRTWRSVERPMEWQRGPILEQPFLPPWERGR
Sbjct: 1  KSFVEMNLVPWISKTLRSLGRTWRSVERPMEWQRGPILEQPFLPPWERGR 50

The following BLAST results are available for this feature:
BLAST of CsaV3_3G027520 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650791.11.4e-21100.00hypothetical protein Csa_017574, partial [Cucumis sativus][more]
BLAST of CsaV3_3G027520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G027520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G027520 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G027520.1CsaV3_3G027520.1mRNA