CsaV3_3G025140 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAAGGGAAGATCGTTGTGATTCGTGATTGGGAAGTACCAAGGTCAGTCACTGACTTGCGCTCCTTCCTCGGGTTAGCCAATTATTACAGGCGATTCGTGGAAGGATTCTCTAAAAGAGCAAGCCCGTTGACTGACTTGCTGAAGAAGGACAACAAGTGGAATTGGACACCGAAAT ATGGAGGAAGGGAAGATCGTTGTGATTCGTGATTGGGAAGTACCAAGGTCAGTCACTGACTTGCGCTCCTTCCTCGGGTTAGCCAATTATTACAGGCGATTCGTGGAAGGATTCTCTAAAAGAGCAAGCCCGTTGACTGACTTGCTGAAGAAGGACAACAAGTGGAATTGGACACCGAAAT ATGGAGGAAGGGAAGATCGTTGTGATTCGTGATTGGGAAGTACCAAGGTCAGTCACTGACTTGCGCTCCTTCCTCGGGTTAGCCAATTATTACAGGCGATTCGTGGAAGGATTCTCTAAAAGAGCAAGCCCGTTGACTGACTTGCTGAAGAAGGACAACAAGTGGAATTGGACACCGAAAT MEEGKIVVIRDWEVPRSVTDLRSFLGLANYYRRFVEGFSKRASPLTDLLKKDNKWNWTPKX Homology
BLAST of CsaV3_3G025140 vs. NCBI nr
Match: KAE8650736.1 (hypothetical protein Csa_023415, partial [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 6.1e-27 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. NCBI nr
Match: TYK07955.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 110.5 bits (275), Expect = 5.0e-21 Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. NCBI nr
Match: TYK26634.1 (polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 109.8 bits (273), Expect = 8.6e-21 Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. NCBI nr
Match: KAA0060093.1 (uncharacterized protein E6C27_scaffold39G00090 [Cucumis melo var. makuwa]) HSP 1 Score: 109.8 bits (273), Expect = 8.6e-21 Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. NCBI nr
Match: KAA0035531.1 (uncharacterized protein E6C27_scaffold285G001970 [Cucumis melo var. makuwa]) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20 Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy Swiss-Prot
Match: P92523 (Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 7.8e-09 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-08 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-08 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-08 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-08 Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy TrEMBL
Match: A0A5D3C8Z6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00760 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21 Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy TrEMBL
Match: A0A5D3DSU8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002800 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21 Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy TrEMBL
Match: A0A5A7UVU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00090 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.2e-21 Identity = 49/60 (81.67%), Postives = 55/60 (91.67%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy TrEMBL
Match: A0A5A7T1S6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001970 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.4e-21 Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20 Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of CsaV3_3G025140 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein ) HSP 1 Score: 60.5 bits (145), Expect = 5.6e-10 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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