CsaV3_3G023680 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G023680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	ethylene-responsive transcription factor TINY
Location	chr3: 21466638 .. 21467582 (+)
RNA-Seq Expression	CsaV3_3G023680
Synteny	CsaV3_3G023680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGTTATAAGTCGCTTTGTTAGGAGCCTACAAATTTATATATACACACACATATAATATAATGTTCCATACGAAACTCTCACATGTTACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTTTTTTGAGAATCAACAATGGCGGAATCAAACAACTGGAATTCAGAATCTGAAAGTAGAGAAATGAAAAGGGGAAAACAGAGGAATCAAGAACAGAGAGATCAGAAACATCCAATTTACAGAGGCGTACGAAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAACCGAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCGGCACGTGCACACGACGTGGCGGCGCTCAGTATCAAAGGGGATTCCGCCAAGGCCATTCTCAATTTCCCTCAGCTCGCCGGTTTGCTTCCCCGACCGGTGTCGTTAATGCCGAGGGATATTCAAGAGGCGGCTGCCAAGGCGGCGGCGATGGTGGATTTTGATTCCGAGACGGTGTCGTTTTCGAATGGTGAAGAAGGGTCAGATGAATTGGCGGAAATTGTGGAATTGCCCAATATTGAAGAGGATATAAGAGCTGAGTCGTGGAACGAGTTCGAGTTTATTGACTCCGTTGATTGGTGGGGAAATCCGCCGTTCACGGCAGCGGAAATGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACGGCTCCGGTCACCTTCGACCGCGGGGATTGGGAATGAAGAAAGAAAATTTGTAAAAAAAAAATGTCCTTTGGGGTTTGATTTTGGTTTCCGTTGTTAATTATTTTTCGGGGGTTAACACGATTATTATTTGTGAAAGGAAATTTTAGTCAATTCTCTACTCCATTTCATGTGAGATTGTGGCGATTTTGATAAAGAAAACAAATTGTAATAATTGAAAGTTAATATTTAAA

mRNA sequence

ATGGCGGAATCAAACAACTGGAATTCAGAATCTGAAAGTAGAGAAATGAAAAGGGGAAAACAGAGGAATCAAGAACAGAGAGATCAGAAACATCCAATTTACAGAGGCGTACGAAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAACCGAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCGGCACGTGCACACGACGTGGCGGCGCTCAGTATCAAAGGGGATTCCGCCAAGGCCATTCTCAATTTCCCTCAGCTCGCCGGTTTGCTTCCCCGACCGGTGTCGTTAATGCCGAGGGATATTCAAGAGGCGGCTGCCAAGGCGGCGGCGATGGTGGATTTTGATTCCGAGACGGTGTCGTTTTCGAATGGTGAAGAAGGGTCAGATGAATTGGCGGAAATTGTGGAATTGCCCAATATTGAAGAGGATATAAGAGCTGAGTCGTGGAACGAGTTCGAGTTTATTGACTCCGTTGATTGGTGGGGAAATCCGCCGTTCACGGCAGCGGAAATGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACGGCTCCGGTCACCTTCGACCGCGGGGATTGGGAATGA

Coding sequence (CDS)

ATGGCGGAATCAAACAACTGGAATTCAGAATCTGAAAGTAGAGAAATGAAAAGGGGAAAACAGAGGAATCAAGAACAGAGAGATCAGAAACATCCAATTTACAGAGGCGTACGAAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAACCGAGGAAGAAATCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCGGCACGTGCACACGACGTGGCGGCGCTCAGTATCAAAGGGGATTCCGCCAAGGCCATTCTCAATTTCCCTCAGCTCGCCGGTTTGCTTCCCCGACCGGTGTCGTTAATGCCGAGGGATATTCAAGAGGCGGCTGCCAAGGCGGCGGCGATGGTGGATTTTGATTCCGAGACGGTGTCGTTTTCGAATGGTGAAGAAGGGTCAGATGAATTGGCGGAAATTGTGGAATTGCCCAATATTGAAGAGGATATAAGAGCTGAGTCGTGGAACGAGTTCGAGTTTATTGACTCCGTTGATTGGTGGGGAAATCCGCCGTTCACGGCAGCGGAAATGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACGGCTCCGGTCACCTTCGACCGCGGGGATTGGGAATGA

Protein sequence

MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFDSETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMDFCAVFSDQSTAPVTFDRGDWE*

Homology

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BLAST of CsaV3_3G023680 vs. NCBI nr
Match: XP_031737929.1 (ethylene-responsive transcription factor TINY-like [Cucumis sativus] >KAE8650718.1 hypothetical protein Csa_010130 [Cucumis sativus])

HSP 1 Score: 399.4 bits (1025), Expect = 1.8e-107
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180
           DFDSETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD
Sbjct: 121 DFDSETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180

Query: 181 FCAVFSDQSTAPVTFDRGDWE 202
           FCAVFSDQSTAPVTFDRGDWE
Sbjct: 181 FCAVFSDQSTAPVTFDRGDWE 201

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BLAST of CsaV3_3G023680 vs. NCBI nr
Match: XP_008447541.1 (PREDICTED: ethylene-responsive transcription factor TINY [Cucumis melo] >KAA0050826.1 ethylene-responsive transcription factor TINY [Cucumis melo var. makuwa] >TYK08521.1 ethylene-responsive transcription factor TINY [Cucumis melo var. makuwa])

HSP 1 Score: 394.8 bits (1013), Expect = 4.4e-106
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAESNNWNSESESREMKRGKQR+QEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180
           DFDSETVSFSNGEEGSDEL EIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD
Sbjct: 121 DFDSETVSFSNGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180

Query: 181 FCAVFSDQSTAPVTFDRGDWE 202
           FCAVFSDQSTAPVTFDRGDWE
Sbjct: 181 FCAVFSDQSTAPVTFDRGDWE 201

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BLAST of CsaV3_3G023680 vs. NCBI nr
Match: XP_038906604.1 (ethylene-responsive transcription factor TINY-like [Benincasa hispida])

HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 183/203 (90.15%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSESE+ E+KRGKQ +QEQRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 32  MAEPNNWNSESENTEIKRGKQGDQEQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 91

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ+AAAKAAAMV
Sbjct: 92  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQKAAAKAAAMV 151

Query: 121 DFDSETVSF--SNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAE 180
           DFDS TVS   SN +EGSDEL EIVELPNIE DIRAESWNEFEFIDSVDWWGNPPF A E
Sbjct: 152 DFDSATVSLSSSNDDEGSDELGEIVELPNIEGDIRAESWNEFEFIDSVDWWGNPPFAAGE 211

Query: 181 MDFCAVFSDQSTAPVTFDRGDWE 202
           MDFCAVFSDQST PVTFD GDWE
Sbjct: 212 MDFCAVFSDQSTPPVTFDGGDWE 234

[Close]

BLAST of CsaV3_3G023680 vs. NCBI nr
Match: XP_022979607.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 3.0e-86
Identity = 172/205 (83.90%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSES+  EMKRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGAEMKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFDSETV---SFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAA 180
           DFD+ T    S SN E GSDEL EIVELPNIEEDIRAESW+EFEFIDSVDWWGNPPF AA
Sbjct: 121 DFDTTTTASFSSSNDEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 EMDFCAVFSDQS-TAPVTFDRGDWE 202
           EMDFC +F+DQS T   TF+ GDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of CsaV3_3G023680 vs. NCBI nr
Match: XP_023528290.1 (ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 1.9e-85
Identity = 172/205 (83.90%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSES+  E+KRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGTELKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFD-SETVSF--SNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAA 180
           DFD + T SF  SN E GSDEL EIVELPNIEEDIRAESW+EFEFIDSVDWWGNPPF AA
Sbjct: 121 DFDTTRTASFSSSNYEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 EMDFCAVFSDQS-TAPVTFDRGDWE 202
           EMDFC +F+DQS T   TF+ GDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

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BLAST of CsaV3_3G023680 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-38
Identity = 101/191 (52.88%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 8   NSESESREMKRGKQRNQEQRDQ------KHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLG 67
           +  ++S E    +Q N+E++ +      KHP+YRGVR+R+WGKWVSEIR+PRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 68  TFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVD 127
           TF + EMAARAHDVAALSIKG  A AILNFP LAG  PRP SL PRDIQ AA KAA M  
Sbjct: 64  TFPSPEMAARAHDVAALSIKG--ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMET 123

Query: 128 ----FDSETVSFSNGEE-------------GSDELAEIVELPNI--EEDIRAESWNEFEF 174
                 S +++FS+ +              GS+EL EIVELP++    D   +  NEF F
Sbjct: 124 SQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIF 183

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-37
Identity = 104/193 (53.89%), Postives = 123/193 (63.73%), Query Frame = 0


Query: 8   NSESES----REMKRGKQRNQEQRDQ-KHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGT 67
           NSES+S     + ++ +++ +  RD  KHP+YRGVR R+WGKWVSEIR+PRKKSRIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 68  FTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAM--- 127
           F T EMAARAHDVAALSIKG +  AILNFP+LA   PRPVSL PRDIQ AA KAA M   
Sbjct: 80  FPTPEMAARAHDVAALSIKGTA--AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 139

Query: 128 VDFDSETVSFSN----------------GEEGSDELAEIVELPNIEEDIRAES---WNEF 174
             F S T S S+                    S+EL EIVELP++      +S    NEF
Sbjct: 140 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-36
Identity = 96/194 (49.48%), Postives = 117/194 (60.31%), Query Frame = 0


Query: 11  SESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAA 70
           + +R+ +R           +HP+YRGVR RSWGKWVSEIRQPRKK+RIWLGTF TA+MAA
Sbjct: 38  NNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAA 97

Query: 71  RAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD------- 130
           RAHDVAAL+IKG S  A+LNFP+LA L PRP S  P DIQ AAA+AAAMV  +       
Sbjct: 98  RAHDVAALTIKGSS--AVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEKDE 157

Query: 131 -------SETVSFSNGEEGSDELAEIVELPNIEE---DIRAESWNEFEFIDSVDWWGNPP 188
                  SE+   +   E  + L +IVELPNIEE   D    S  +  + +  D W  PP
Sbjct: 158 APEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSEPFDCWVYPP 217

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-35
Identity = 95/179 (53.07%), Postives = 115/179 (64.25%), Query Frame = 0


Query: 24  QEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGD 83
           +++ + K P+YRGVR RSWGKWVSEIR+PRKKSRIWLGTF TAEMA RAHDVAA+SIKG 
Sbjct: 9   EKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGT 68

Query: 84  SAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD-------------------- 143
           S  AILNFP+L+ LLPRPVSL PRD++ AA KAA M DFD                    
Sbjct: 69  S--AILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSNKMS 128

Query: 144 -----SETVSFSNG--------EEG--SDELAEIVELPNIEEDIRAESWNEFEFIDSVD 168
                +ETVSFS+         EE   SD+L EIV+LP++   +     NEF   DS++
Sbjct: 129 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES--NEFVIFDSLE 182

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.7e-31
Identity = 92/189 (48.68%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 10  ESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMA 69
           E      +   + N ++R +  P YRGVR R+WGKWVSEIR+PRKKSRIWLGTF+T EMA
Sbjct: 19  EDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMA 78

Query: 70  ARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD------ 129
           ARAHD AAL+IKG S  A+LNFP+LA  LPRP S  PRD+Q AAA AAAM DF       
Sbjct: 79  ARAHDAAALTIKGTS--AVLNFPELATYLPRPASSSPRDVQAAAAVAAAM-DFSPSSSSL 138

Query: 130 -------------------------SETVSFSNGEEGS--DELAEIVELPNIEEDIRAES 166
                                    S ++S S+ E  S  +EL+EIVELP++E     ES
Sbjct: 139 VVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DES 198

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy TrEMBL
Match: A0A5D3C9I7 (Ethylene-responsive transcription factor TINY OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00580 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.1e-106
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAESNNWNSESESREMKRGKQR+QEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180
           DFDSETVSFSNGEEGSDEL EIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD
Sbjct: 121 DFDSETVSFSNGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180

Query: 181 FCAVFSDQSTAPVTFDRGDWE 202
           FCAVFSDQSTAPVTFDRGDWE
Sbjct: 181 FCAVFSDQSTAPVTFDRGDWE 201

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy TrEMBL
Match: A0A1S3BHN5 (ethylene-responsive transcription factor TINY OS=Cucumis melo OX=3656 GN=LOC103489964 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.1e-106
Identity = 198/201 (98.51%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAESNNWNSESESREMKRGKQR+QEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAESNNWNSESESREMKRGKQRDQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSA+AILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSARAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120

Query: 121 DFDSETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180
           DFDSETVSFSNGEEGSDEL EIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD
Sbjct: 121 DFDSETVSFSNGEEGSDELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAEMD 180

Query: 181 FCAVFSDQSTAPVTFDRGDWE 202
           FCAVFSDQSTAPVTFDRGDWE
Sbjct: 181 FCAVFSDQSTAPVTFDRGDWE 201

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy TrEMBL
Match: A0A6J1IP61 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111479284 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 172/205 (83.90%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSES+  EMKRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGAEMKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFDSETV---SFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAA 180
           DFD+ T    S SN E GSDEL EIVELPNIEEDIRAESW+EFEFIDSVDWWGNPPF AA
Sbjct: 121 DFDTTTTASFSSSNDEGGSDELGEIVELPNIEEDIRAESWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 EMDFCAVFSDQS-TAPVTFDRGDWE 202
           EMDFC +F+DQS T   TF+ GDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy TrEMBL
Match: A0A6J1GVC4 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111457824 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 170/205 (82.93%), Postives = 179/205 (87.32%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE NNWNSES+  E+KRG      QRDQKHPIYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEPNNWNSESDGTELKRG-----NQRDQKHPIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFDSETV---SFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAA 180
           DFD+ T    S SN E GSDEL EIVELPNIEEDIRAE+W+EFEFIDSVDWWGNPPF AA
Sbjct: 121 DFDTTTTASFSSSNYEGGSDELGEIVELPNIEEDIRAETWSEFEFIDSVDWWGNPPFVAA 180

Query: 181 EMDFCAVFSDQS-TAPVTFDRGDWE 202
           EMDFC +F+DQS T   TF+ GDWE
Sbjct: 181 EMDFCPLFADQSTTTSATFNGGDWE 200

[Close]

BLAST of CsaV3_3G023680 vs. ExPASy TrEMBL
Match: A0A6J1K8P5 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111492697 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.2e-78
Identity = 159/203 (78.33%), Postives = 169/203 (83.25%), Query Frame = 0


Query: 1   MAESNNWNSESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWL 60
           MAE++N N ESES E+KRG        ++KH IYRGVR+RSWGKWVSEIRQPRKKSRIWL
Sbjct: 1   MAEASNSNLESESTEIKRG--------NRKHQIYRGVRKRSWGKWVSEIRQPRKKSRIWL 60

Query: 61  GTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMV 120
           GTFTT EMAARAHDVA LSIKGDSAK ILNFPQLAGLLPRPVSLMPRDIQ AAAKAAAMV
Sbjct: 61  GTFTTPEMAARAHDVALLSIKGDSAKPILNFPQLAGLLPRPVSLMPRDIQAAAAKAAAMV 120

Query: 121 DFDS--ETVSFSNGEEGSDELAEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFTAAE 180
           DFDS   T S SN EEGSDEL EIVELPNIEE+I AESWN+FE +DSVDWWGNPP+T AE
Sbjct: 121 DFDSTMPTTSSSNDEEGSDELGEIVELPNIEEEISAESWNKFELVDSVDWWGNPPYTVAE 180

Query: 181 MDFCAVFSDQSTAPVTFDRGDWE 202
            DF   FS QST PV FD GDWE
Sbjct: 181 TDFVGGFSYQSTIPVIFDGGDWE 195

[Close]

BLAST of CsaV3_3G023680 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.7e-39
Identity = 101/191 (52.88%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 8   NSESESREMKRGKQRNQEQRDQ------KHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLG 67
           +  ++S E    +Q N+E++ +      KHP+YRGVR+R+WGKWVSEIR+PRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 68  TFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVD 127
           TF + EMAARAHDVAALSIKG  A AILNFP LAG  PRP SL PRDIQ AA KAA M  
Sbjct: 64  TFPSPEMAARAHDVAALSIKG--ASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMET 123

Query: 128 ----FDSETVSFSNGEE-------------GSDELAEIVELPNI--EEDIRAESWNEFEF 174
                 S +++FS+ +              GS+EL EIVELP++    D   +  NEF F
Sbjct: 124 SQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIF 183

[Close]

BLAST of CsaV3_3G023680 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-38
Identity = 104/193 (53.89%), Postives = 123/193 (63.73%), Query Frame = 0


Query: 8   NSESES----REMKRGKQRNQEQRDQ-KHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGT 67
           NSES+S     + ++ +++ +  RD  KHP+YRGVR R+WGKWVSEIR+PRKKSRIWLGT
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGT 79

Query: 68  FTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAM--- 127
           F T EMAARAHDVAALSIKG +  AILNFP+LA   PRPVSL PRDIQ AA KAA M   
Sbjct: 80  FPTPEMAARAHDVAALSIKGTA--AILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 139

Query: 128 VDFDSETVSFSN----------------GEEGSDELAEIVELPNIEEDIRAES---WNEF 174
             F S T S S+                    S+EL EIVELP++      +S    NEF
Sbjct: 140 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

[Close]

BLAST of CsaV3_3G023680 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-37
Identity = 96/194 (49.48%), Postives = 117/194 (60.31%), Query Frame = 0


Query: 11  SESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAA 70
           + +R+ +R           +HP+YRGVR RSWGKWVSEIRQPRKK+RIWLGTF TA+MAA
Sbjct: 38  NNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAA 97

Query: 71  RAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD------- 130
           RAHDVAAL+IKG S  A+LNFP+LA L PRP S  P DIQ AAA+AAAMV  +       
Sbjct: 98  RAHDVAALTIKGSS--AVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLLEKDE 157

Query: 131 -------SETVSFSNGEEGSDELAEIVELPNIEE---DIRAESWNEFEFIDSVDWWGNPP 188
                  SE+   +   E  + L +IVELPNIEE   D    S  +  + +  D W  PP
Sbjct: 158 APEAPPSSESSYVAAESEDEERLEKIVELPNIEEGSYDESVTSRADLAYSEPFDCWVYPP 217

[Close]

BLAST of CsaV3_3G023680 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36
Identity = 95/179 (53.07%), Postives = 115/179 (64.25%), Query Frame = 0


Query: 24  QEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGD 83
           +++ + K P+YRGVR RSWGKWVSEIR+PRKKSRIWLGTF TAEMA RAHDVAA+SIKG 
Sbjct: 9   EKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGT 68

Query: 84  SAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD-------------------- 143
           S  AILNFP+L+ LLPRPVSL PRD++ AA KAA M DFD                    
Sbjct: 69  S--AILNFPELSKLLPRPVSLSPRDVRAAATKAALM-DFDTTAFRSDTETSETTTSNKMS 128

Query: 144 -----SETVSFSNG--------EEG--SDELAEIVELPNIEEDIRAESWNEFEFIDSVD 168
                +ETVSFS+         EE   SD+L EIV+LP++   +     NEF   DS++
Sbjct: 129 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES--NEFVIFDSLE 182

[Close]

BLAST of CsaV3_3G023680 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-32
Identity = 92/189 (48.68%), Postives = 114/189 (60.32%), Query Frame = 0


Query: 10  ESESREMKRGKQRNQEQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMA 69
           E      +   + N ++R +  P YRGVR R+WGKWVSEIR+PRKKSRIWLGTF+T EMA
Sbjct: 19  EDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMA 78

Query: 70  ARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFD------ 129
           ARAHD AAL+IKG S  A+LNFP+LA  LPRP S  PRD+Q AAA AAAM DF       
Sbjct: 79  ARAHDAAALTIKGTS--AVLNFPELATYLPRPASSSPRDVQAAAAVAAAM-DFSPSSSSL 138

Query: 130 -------------------------SETVSFSNGEEGS--DELAEIVELPNIEEDIRAES 166
                                    S ++S S+ E  S  +EL+EIVELP++E     ES
Sbjct: 139 VVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DES 198

The following BLAST results are available for this feature:

BLAST of CsaV3_3G023680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737929.1	1.8e-107	100.00	ethylene-responsive transcription factor TINY-like [Cucumis sativus] >KAE8650718...	[more]
XP_008447541.1	4.4e-106	98.51	PREDICTED: ethylene-responsive transcription factor TINY [Cucumis melo] >KAA0050...	[more]
XP_038906604.1	2.1e-95	90.15	ethylene-responsive transcription factor TINY-like [Benincasa hispida]	[more]
XP_022979607.1	3.0e-86	83.90	ethylene-responsive transcription factor TINY-like [Cucurbita maxima]	[more]
XP_023528290.1	1.9e-85	83.90	ethylene-responsive transcription factor TINY-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G023680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39127	2.4e-38	52.88	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYD3	2.7e-37	53.89	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LU18	2.9e-36	49.48	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	2.5e-35	53.07	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	3.7e-31	48.68	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_3G023680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9I7	2.1e-106	98.51	Ethylene-responsive transcription factor TINY OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BHN5	2.1e-106	98.51	ethylene-responsive transcription factor TINY OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1IP61	1.4e-86	83.90	ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1GVC4	1.2e-85	82.93	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1K8P5	3.2e-78	78.33	ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of CsaV3_3G023680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25810.1	1.7e-39	52.88	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	1.9e-38	53.89	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	2.1e-37	49.48	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	1.8e-36	53.07	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	2.6e-32	48.68	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 56..72 score: 69.52 coord: 34..45 score: 71.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 33..98 e-value: 3.3E-34 score: 129.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 32..82 e-value: 9.0E-14 score: 51.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 33..92 score: 23.221937
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 32..92 e-value: 1.02348E-29 score: 102.735
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 33..93 e-value: 3.9E-24 score: 86.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..32
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 4..179
None	No IPR available	PANTHER	PTHR31985:SF95	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 4..179
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 33..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G023680.1	CsaV3_3G023680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity