CsaV3_3G023630 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCTACAATGGAAAGAAGAAACGACAACCCGTGCAATTCAGAAGGAGAAGATTCAAAGTTTAATGGAAGAAAAATCAAGTTTAATGGAAGAAAATCAAAGACTTCTAATGATCATTTCCTCTCTAAAACTCAATTTGAAAGAAGTTCAGATGGAACATGAGCAACTTGAGAAATCT ATGGTGCTACAATGGAAAGAAGAAACGACAACCCGTGCAATTCAGAAGGAGAAGATTCAAAGTTTAATGGAAGAAAAATCAAGTTTAATGGAAGAAAATCAAAGACTTCTAATGATCATTTCCTCTCTAAAACTCAATTTGAAAGAAGTTCAGATGGAACATGAGCAACTTGAGAAATCT ATGGTGCTACAATGGAAAGAAGAAACGACAACCCGTGCAATTCAGAAGGAGAAGATTCAAAGTTTAATGGAAGAAAAATCAAGTTTAATGGAAGAAAATCAAAGACTTCTAATGATCATTTCCTCTCTAAAACTCAATTTGAAAGAAGTTCAGATGGAACATGAGCAACTTGAGAAATCT MVLQWKEETTTRAIQKEKIQSLMEEKSSLMEENQRLLMIISSLKLNLKEVQMEHEQLEKS Homology
BLAST of CsaV3_3G023630 vs. NCBI nr
Match: KAE8650715.1 (hypothetical protein Csa_010579, partial [Cucumis sativus]) HSP 1 Score: 106.7 bits (265), Expect = 7.1e-20 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. NCBI nr
Match: KAA0041665.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 3.8e-05 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. NCBI nr
Match: KAA0050329.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK03546.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. NCBI nr
Match: KAA0050618.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK07822.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 3.2e-04 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. NCBI nr
Match: KAA0067191.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK26039.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 54.3 bits (129), Expect = 4.2e-04 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. ExPASy TrEMBL
Match: A0A5A7TJQ7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G001470 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.8e-05 Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. ExPASy TrEMBL
Match: A0A5A7UA03 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00400 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.4e-05 Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. ExPASy TrEMBL
Match: A0A5A7U5R6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001170 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. ExPASy TrEMBL
Match: A0A5D3DRM4 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00550 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
BLAST of CsaV3_3G023630 vs. ExPASy TrEMBL
Match: A0A5D3E2X5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold669G00040 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.7e-04 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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