CsaV3_3G023270 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G023270
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein RALF-like 9
Location	chr3: 20830466 .. 20831252 (+)
RNA-Seq Expression	CsaV3_3G023270
Synteny	CsaV3_3G023270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTTTCACATTTCAAGTTTGTATAAGTTTTTGTCATAAAGGATGATCATGTCAAAGAGAATGACACTTGTTTTTATTGGGATTCTCTTGGTTAGCTTCGACATGATTATGATCACAAATGCAAAAAAATTCATTGATTACGGTTCTATTGTTGCAGGAGATGTTAGCCCTGGATGTAGCCCAACGCACCCTGAACTTTGTAGAGTAAAGAGCGCAAATCCATACCAAAGAGGTTGCAATCGAATCGATCGTTGTAGAGAGGGAAATGATATTATTGACGCTGAAGAAGAACATATTGAAGGGGATGCATCGATTAGTCCTTCAATAAGCCCTAATATAGAGAATTAAATCTTGATTGAATTGATATGATATAACATTTATTTATATTTATCTAAAACAAAATTATTTATGTCTAGTTATTTGATGAATGATTGAATAATGCAATCATTAGATGTCTGACAAGGCTTGAAAGCTATGTGTAATATGTAATTGGTAAGGTCGCTTAAAGGACAATTATGCAACAATATATGCTAATTTTTACGGAGAATTGAAAAATAGCTGCAAATGTAAGTAATTTGGAAAAGGTAAAGACTGACCAATTCACCTTGACAAAAAATTATTTGTAAAAACCCTTGCTTATTATTGTACTGTGGTGGCAAGTGAGGGTGTTGAACCCAGAGGAGTGGAGGTTATTCTTTCTTGAATTCGAACTAGAAAAGATTGTTCGAGAAACTAAGAAAGCGTTGATAGATTAAGCAAGAAATTTAAAGAACCATGATGTAAGAAG

mRNA sequence

ATGATCATGTCAAAGAGAATGACACTTGTTTTTATTGGGATTCTCTTGGTTAGCTTCGACATGATTATGATCACAAATGCAAAAAAATTCATTGATTACGGTTCTATTGTTGCAGGAGATGTTAGCCCTGGATGTAGCCCAACGCACCCTGAACTTTGTAGAGTAAAGAGCGCAAATCCATACCAAAGAGGTTGCAATCGAATCGATCGTTGTAGAGAGGGAAATGATATTATTGACGCTGAAGAAGAACATATTGAAGGGGATGCATCGATTAGTCCTTCAATAAGCCCTAATATAGAGAATTAA

Coding sequence (CDS)

ATGATCATGTCAAAGAGAATGACACTTGTTTTTATTGGGATTCTCTTGGTTAGCTTCGACATGATTATGATCACAAATGCAAAAAAATTCATTGATTACGGTTCTATTGTTGCAGGAGATGTTAGCCCTGGATGTAGCCCAACGCACCCTGAACTTTGTAGAGTAAAGAGCGCAAATCCATACCAAAGAGGTTGCAATCGAATCGATCGTTGTAGAGAGGGAAATGATATTATTGACGCTGAAGAAGAACATATTGAAGGGGATGCATCGATTAGTCCTTCAATAAGCCCTAATATAGAGAATTAA

Protein sequence

MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN*

Homology

[Close]

BLAST of CsaV3_3G023270 vs. NCBI nr
Match: KAE8650705.1 (hypothetical protein Csa_010421 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
           MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP
Sbjct: 1   MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60

Query: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 102
           YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN
Sbjct: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 101

[Close]

BLAST of CsaV3_3G023270 vs. NCBI nr
Match: XP_022159360.1 (uncharacterized protein LOC111025777 [Momordica charantia])

HSP 1 Score: 108.6 bits (270), Expect = 3.2e-20
Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
          M +SK    +F+GILL    MI ITNA +FI Y  +  GDVSPGCSPTHPELC++ SANP
Sbjct: 1  MAISKGSMFIFVGILLYCMGMIDITNATRFIHYDPL-RGDVSPGCSPTHPELCKLHSANP 60

Query: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDA 90
          Y+RGC  IDRCR G+DIID  E  +EGDA
Sbjct: 61 YKRGCTSIDRCRGGSDIIDDAEMIVEGDA 88

[Close]

BLAST of CsaV3_3G023270 vs. NCBI nr
Match: XP_022136918.1 (uncharacterized protein LOC111008495 [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
          M+  K   LVFIGILLVSF MI ITNA ++I+Y ++   DVSPGCSP HP LC++  AN 
Sbjct: 1  MMTPKGSMLVFIGILLVSFRMIEITNAIQYINYHALKT-DVSPGCSPKHPGLCKLHEANS 60

Query: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDA 90
          YQRGC+ I+RCR  +D ID+EE+ I+GDA
Sbjct: 61 YQRGCSAINRCRR-DDYIDSEEK-IKGDA 86

[Close]

BLAST of CsaV3_3G023270 vs. NCBI nr
Match: XP_022961577.1 (protein RALF-like 9 [Cucurbita moschata])

HSP 1 Score: 87.4 bits (215), Expect = 7.6e-14
Identity = 55/114 (48.25%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 3   MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
           MSK   ++FI +L VS +MI ITNA  +I+Y  +   +    CSPTHP+LC+   ANPYQ
Sbjct: 1   MSKGTMIIFIVVLFVSINMIEITNATHYINYDPL-KKNRDLVCSPTHPDLCKTTPANPYQ 60

Query: 63  RGCNRIDRCR--EGNDIIDAEEEHI-------------EG-DASISPSISPNIE 101
           RGCN IDRCR  E +DIID +EE I             EG D +  P+ISPN E
Sbjct: 61  RGCNPIDRCRGAESDDIIDNDEEDITNNDEEDDIVDNDEGYDNASCPAISPNGE 113

[Close]

BLAST of CsaV3_3G023270 vs. NCBI nr
Match: PNX70961.1 (hypothetical protein L195_g057917 [Trifolium pratense])

HSP 1 Score: 84.7 bits (208), Expect = 4.9e-13
Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 3   MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
           M+K M +VF+  LL+         AKKFI YG+I   D+SPGCSP HPELC+   ANPY+
Sbjct: 1   MAKTMLVVFLSALLICTFFTQDVEAKKFIGYGAI-GRDISPGCSPKHPELCKFHPANPYR 60

Query: 63  RGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNI 100
           RGC    RCR G      EEE +E D   S  + P++
Sbjct: 61  RGCEAEMRCRGGPSAEKEEEEEVEEDPDHSHILIPDL 96

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy Swiss-Prot
Match: Q3ECL0 (Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + LV F  +  T   A ++I Y +I  GD +  C   HP  C+ K A
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 60

Query: 61 NPYQRGCNRIDRCREG 75
          NPYQRGC +I+RCR G
Sbjct: 61 NPYQRGCEKINRCRGG 75

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy Swiss-Prot
Match: A8MQM7 (Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.0e-05
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + L+ F  +  T   A ++I Y  +  GD +  C   HP  C+ + A
Sbjct: 1  MGMSKSIK-VIVSLALILFLALAATKVEATRYISYRGMNHGDHAIHCDKAHPNTCKKQVA 60

Query: 61 NPYQRGCNRIDRCR 73
          NPY+RGC  I+RCR
Sbjct: 61 NPYRRGCGTIERCR 73

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy Swiss-Prot
Match: Q1ECR9 (Protein RALF-like 8 OS=Arabidopsis thaliana OX=3702 GN=RALFL8 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.7e-04
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAK---KFIDYGSIVAGDVSPGCSPTHPELCRVKS 60
          M MSK +  V + + LV F  +  T  +   ++I Y +I  GD +  C   HP  C+ K 
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQ 60

Query: 61 ANPYQRGCNRIDRC 72
          ANPY+RGC  ++ C
Sbjct: 61 ANPYRRGCGVLEGC 73

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy TrEMBL
Match: A0A0A0L8B1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
           MIMSKRMTLVFIGILLVSFDMIMITNA+KFIDYGSIVAGDVSPGCSPTHPELCRVKSANP
Sbjct: 1   MIMSKRMTLVFIGILLVSFDMIMITNARKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60

Query: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 102
           YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN
Sbjct: 61  YQRGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIEN 101

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy TrEMBL
Match: A0A6J1DYH7 (uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025777 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
          M +SK    +F+GILL    MI ITNA +FI Y  +  GDVSPGCSPTHPELC++ SANP
Sbjct: 1  MAISKGSMFIFVGILLYCMGMIDITNATRFIHYDPL-RGDVSPGCSPTHPELCKLHSANP 60

Query: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDA 90
          Y+RGC  IDRCR G+DIID  E  +EGDA
Sbjct: 61 YKRGCTSIDRCRGGSDIIDDAEMIVEGDA 88

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy TrEMBL
Match: A0A6J1C8U5 (uncharacterized protein LOC111008495 OS=Momordica charantia OX=3673 GN=LOC111008495 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.7e-16
Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANP 60
          M+  K   LVFIGILLVSF MI ITNA ++I+Y ++   DVSPGCSP HP LC++  AN 
Sbjct: 1  MMTPKGSMLVFIGILLVSFRMIEITNAIQYINYHALKT-DVSPGCSPKHPGLCKLHEANS 60

Query: 61 YQRGCNRIDRCREGNDIIDAEEEHIEGDA 90
          YQRGC+ I+RCR  +D ID+EE+ I+GDA
Sbjct: 61 YQRGCSAINRCRR-DDYIDSEEK-IKGDA 86

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy TrEMBL
Match: A0A6J1HAJ8 (protein RALF-like 9 OS=Cucurbita moschata OX=3662 GN=LOC111462118 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.7e-14
Identity = 55/114 (48.25%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 3   MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
           MSK   ++FI +L VS +MI ITNA  +I+Y  +   +    CSPTHP+LC+   ANPYQ
Sbjct: 1   MSKGTMIIFIVVLFVSINMIEITNATHYINYDPL-KKNRDLVCSPTHPDLCKTTPANPYQ 60

Query: 63  RGCNRIDRCR--EGNDIIDAEEEHI-------------EG-DASISPSISPNIE 101
           RGCN IDRCR  E +DIID +EE I             EG D +  P+ISPN E
Sbjct: 61  RGCNPIDRCRGAESDDIIDNDEEDITNNDEEDDIVDNDEGYDNASCPAISPNGE 113

[Close]

BLAST of CsaV3_3G023270 vs. ExPASy TrEMBL
Match: A0A2K3KXF8 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g057917 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.4e-13
Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 3   MSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62
           M+K M +VF+  LL+         AKKFI YG+I   D+SPGCSP HPELC+   ANPY+
Sbjct: 1   MAKTMLVVFLSALLICTFFTQDVEAKKFIGYGAI-GRDISPGCSPKHPELCKFHPANPYR 60

Query: 63  RGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNI 100
           RGC    RCR G      EEE +E D   S  + P++
Sbjct: 61  RGCEAEMRCRGGPSAEKEEEEEVEEDPDHSHILIPDL 96

[Close]

BLAST of CsaV3_3G023270 vs. TAIR 10
Match: AT1G61566.1 (ralf-like 9 )

HSP 1 Score: 57.4 bits (137), Expect = 7.9e-09
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + LV F  +  T   A ++I Y +I  GD +  C   HP  C+ K A
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEA 60

Query: 61 NPYQRGCNRIDRCREG 75
          NPYQRGC +I+RCR G
Sbjct: 61 NPYQRGCEKINRCRGG 75

[Close]

BLAST of CsaV3_3G023270 vs. TAIR 10
Match: AT2G22055.1 (RALF-like 15 )

HSP 1 Score: 49.3 bits (116), Expect = 2.1e-06
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMIT--NAKKFIDYGSIVAGDVSPGCSPTHPELCRVKSA 60
          M MSK +  V + + L+ F  +  T   A ++I Y  +  GD +  C   HP  C+ + A
Sbjct: 1  MGMSKSIK-VIVSLALILFLALAATKVEATRYISYRGMNHGDHAIHCDKAHPNTCKKQVA 60

Query: 61 NPYQRGCNRIDRCR 73
          NPY+RGC  I+RCR
Sbjct: 61 NPYRRGCGTIERCR 73

[Close]

BLAST of CsaV3_3G023270 vs. TAIR 10
Match: AT1G61563.1 (ralf-like 8 )

HSP 1 Score: 45.1 bits (105), Expect = 4.0e-05
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAK---KFIDYGSIVAGDVSPGCSPTHPELCRVKS 60
          M MSK +  V + + LV F  +  T  +   ++I Y +I  GD +  C   HP  C+ K 
Sbjct: 1  MGMSKSIK-VILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQ 60

Query: 61 ANPYQRGCNRIDRC 72
          ANPY+RGC  ++ C
Sbjct: 61 ANPYRRGCGVLEGC 73

[Close]

BLAST of CsaV3_3G023270 vs. TAIR 10
Match: AT4G11653.1 (RALF-like 29 )

HSP 1 Score: 42.4 bits (98), Expect = 2.6e-04
Identity = 28/74 (37.84%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 1  MIMSKRMTLVFIGILLVSFDMIMITNAKKFIDYGSIVAGDVSPGCSPTHPELCRVK--SA 60
          MI +K +T  F+ IL+V    I   +AK++I+Y   +  D+  GC P  P     K   A
Sbjct: 1  MIKTKEVT--FVTILIVLCVFISTIHAKRYIEYP--IRLDLGKGCDPRFPTAACYKRTPA 60

Query: 61 NPYQRGCNRIDRCR 73
          NPY+R C   +RCR
Sbjct: 61 NPYRRPCTTANRCR 70

[Close]

BLAST of CsaV3_3G023270 vs. TAIR 10
Match: AT1G23147.1 (RALF-like 3 )

HSP 1 Score: 40.8 bits (94), Expect = 7.6e-04
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 15 LLVSFDMIMITN--AKKFIDYGSIVAG--------DVSP----GCSPTHPELCRVKS-AN 73
          +LVSF  + I N  A+K I Y     G        +++P    GC P +P+ C  K  AN
Sbjct: 15 VLVSFVFLSIMNAEARKEIGYPKQRFGEDRTNPYEEITPPLIGGCDPKNPQTCLPKQPAN 74

The following BLAST results are available for this feature:

BLAST of CsaV3_3G023270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650705.1	1.2e-48	100.00	hypothetical protein Csa_010421 [Cucumis sativus]	[more]
XP_022159360.1	3.2e-20	61.80	uncharacterized protein LOC111025777 [Momordica charantia]	[more]
XP_022136918.1	1.4e-15	59.55	uncharacterized protein LOC111008495 [Momordica charantia]	[more]
XP_022961577.1	7.6e-14	48.25	protein RALF-like 9 [Cucurbita moschata]	[more]
PNX70961.1	4.9e-13	46.39	hypothetical protein L195_g057917 [Trifolium pratense]	[more]

BLAST of CsaV3_3G023270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3ECL0	1.1e-07	43.42	Protein RALF-like 9 OS=Arabidopsis thaliana OX=3702 GN=RALFL9 PE=3 SV=1	[more]
A8MQM7	3.0e-05	37.84	Protein RALF-like 15 OS=Arabidopsis thaliana OX=3702 GN=RALFL15 PE=3 SV=1	[more]
Q1ECR9	5.7e-04	36.49	Protein RALF-like 8 OS=Arabidopsis thaliana OX=3702 GN=RALFL8 PE=1 SV=1	[more]

BLAST of CsaV3_3G023270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8B1	1.3e-48	99.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426350 PE=3 SV=1	[more]
A0A6J1DYH7	1.5e-20	61.80	uncharacterized protein LOC111025777 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1C8U5	6.7e-16	59.55	uncharacterized protein LOC111008495 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A6J1HAJ8	3.7e-14	48.25	protein RALF-like 9 OS=Cucurbita moschata OX=3662 GN=LOC111462118 PE=3 SV=1	[more]
A0A2K3KXF8	2.4e-13	46.39	Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g057917 PE=3 SV=1	[more]

BLAST of CsaV3_3G023270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61566.1	7.9e-09	43.42	ralf-like 9	[more]
AT2G22055.1	2.1e-06	37.84	RALF-like 15	[more]
AT1G61563.1	4.0e-05	36.49	ralf-like 8	[more]
AT4G11653.1	2.6e-04	37.84	RALF-like 29	[more]
AT1G23147.1	7.6e-04	38.36	RALF-like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 26..72 e-value: 1.8E-8 score: 35.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..101
None	No IPR available	PANTHER	PTHR34270	PROTEIN RALF-LIKE 15-RELATED	coord: 1..93
None	No IPR available	PANTHER	PTHR34270:SF10	SUBFAMILY NOT NAMED	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G023270.1	CsaV3_3G023270.1	mRNA