CsaV3_3G023260 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G023260
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Lipocln_cytosolic_FA-bd_dom domain-containing protein
Location	chr3: 20811650 .. 20815560 (+)
RNA-Seq Expression	CsaV3_3G023260
Synteny	CsaV3_3G023260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGATAATACGAATTGCAGCTCTAATACGTCACCGTTTTGCTAGTAGAGACATTTGATCGAGAATTGACCAATGAGTAGCGTAGTATATGGTTGAAGAAGGCTCGAAGCAGAACCAAGCAACAAAAAATGGCGATGTTCTGTAAATTCATCTCAGATGACGTTTGAAACTCCTAGAAGGAAGGTATTCCTATTCAAAAATGGTGCAGATTCTTCTCCAATGCTCTTCTCCTCCTCCTCCGCCTCCTTCTCCTACTTCCTCCAGGTATCACCATTTTCCATTTCCTTATTCTTTCTCCATTAATCCCTACGCTTTCTTGTGTTGTGTAATTTTACTTCCATTTTTCTGGGTTCATTTCAATTTGTGATTAAACTCGTGATTCCTGCTGTAGTTTTCGGGTATTTGCGTTGGCATTAGGAAATTTCGTAACTAGGTTGTGCGTTGTTGGACTGTATATTCGAAATAGGATACATGGGTTTAATTCAAGAGTCTTTTCTTAGGTTCTGAAAAATGGAGAAATGAATTTGCATTTGAACTGAGGTTGCATTCAGTTGGGCGACCGAGTTCATGGATTGAAAATGGCTGTGTACTTGAGTTTGATGTGCAATTGATATCAGTGGTTGAATTGGACACACGGTGTTGAAAGTAGTAATCAATATAATGAACAACTACTTGTGATAGTGTCATAGATGAGATGACTAGACCTCAGTCCTCAATGTTTAGTGCTTCTTTGTTTATGTTTATTTCTATTCTCTCACAACTGTTGGTTCAAACTAACTGATGGTCCATTTTATCAGCCGTTGGCTTTTTTTGCTTATTTTTTTCAAATTTTTTTGTCTTTTTTGTAAGCAGGGGAATGCCTGGCAAAGTAATGTTGAAGAATGGTTTTGAGCAATCTTCTCTAAGAAAGCTTGTGTCCCAGCATGTACTCTCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGTTAGTGAGTCTATTGATTACTGCAAGACGTTAATGTAAGAACATTTCTAAAGATAGCTAAGTAGTCAACTTCGAGTAGTATCTGATCCATTGTTGATCTGTTTGGTTTGGTGTGCATTTAACTTGCATAATGGCATCAGAATGCCGGCAATTTAGATTCCATTGAAAAGCTTGGATCCCATCATTTATTTGCAAATAATAGGTTCAAATGCTCTAAGAAGCATATGATATGCTGTGTTATGCAATTAGCTCTCTGTTCATAACGTTACACTGAATGAATATAGAGTTTCTTCGCAAGATCCAATGGTATTTGGGATTCATTAATTCATGTCATAGGAGAGGACATATACAGGATTACGTGACAAACTTTATGAATACAAGCAGAGCTTCATGTCTTACATTAGTTTCTTGATCAGGCTATCTCAGGAGATATACCTCGCCGTGAAAACTTGTGTCAGCTTGCAAGTGCAGAGAATGCTGCAGGCCTTCCTTTTGTCAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGGATGACAGCCAAAAATTTTGATCCTGTTCGATACTCAGGAAGATGGTTCGAAGTTGCATCACTTAAACGTGGATTTGCTGGCCAAGGTCAGGAAGACTGCCACTGCACCCAGGTGAACCTGACTGGTTGGTGTAGCTTATAGTTTCTTTTGTCTCTTGGAATCTGGACGATTACTCGTTTAATCATATATTTCAAACAACAACCAACCAGTCTTACATGCCTTTTGTGTAATGGAGCGAAAAAATGGCCTGGGCAAACTTAATCATTTACTCTAACGATGTTAATTATTAATCATTTACAGTCCAACAGCCATATGACTAAGTTAAGTCAATGTAGTAATCATACTGACGAATAAGATATTCCACTGTACCAATATGTAGGGTGTTTACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGACGGATATATAACTGGGATAAGAGGAAGAGTTCAGTGTCTTGCAGAGGAAGATTTACAGAAAAACGCAACTGAGCTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACATTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTTGCTATAGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGGTAAATTTAAAGATTCAGTGCATATTTTAGTTTGGTTTAAATACCATTTTGATCCTGGTGGCTGATGCTATAACTTGTGATTTTAAAACGTTCTGACAGCTATACGTATATACAAATGGACTAATTACTGATATTTAGTTTAGTTTTCAAACAATTTGCTCATTAAAAACGGCTTAGAACTCCAATTATAGGATTTTTTTTTTTTGTTGCAAAATCTTCAACTACGATTTTAGAGATTGTTAAAGGAAAACATATAAATGAGATTTCTCTATTTTACTGTCCTTCTCTATTCTATTGATTTGACATTCAAACTTGCAAAACGGAAGAAATATGTTTCAATTTATACTCCTAAACTTTAGAAATTGTATTAGTTTAAACCTTGAACTTTTGTAAGTTTATCAATGTAAACCCTCCACTAAGACGCCTTTGGAGAAACTTCATGTGAAACTCTTAATTGTATTAATTAAACCCGTAAACATTCATAAATGAATCAATTTAGAATTTTCTTCGAGACTCGTCTATGCATTTACTCTATTGTCTAATTTGTAATATTGACTTTTGAAAATTAATGCATGGATGATTTTTAAAGATAGCTATGAAGGAGCCTAAATTGATTAACTTATGAATATTTTGGAGCATAATTGATTCAAATCTTAAGTCTCACGTGATATTATTAGAAAAGTATTATTAAAAAGAAATCTAAGGGAAGGAGTAAACTGATACACTTACAAAAATTTTGTGGTTAAGTTGATATAATTGTTGGTTCTGAGTTTTAACGAATACAACCTTTAAAGGTTAGGGGTACAAATTGATATTTCCTTCTATTTTTTTCTTTTTTTCTTTTCTTAATAAGCAAGGTTTTATTAAGCCATACTTTTCTTTTAGATTTGACTGCATCTTCAATGGAAATGATACATATGGTTTGTTCTATGTCTGCAACGCGTGTAATGACTACACTAAAACTAGCAAACAGGAGAGTATGATTTGCAAACTATAAAGATGTTTGAGACCATTTTTGGCATACATTGGTGCAGATTACAGAAAGGTAAACAACATGTGTATTTGAACCCTGAATAAATTGGATTACTAGTCTTCATCCCGGGTTAGAATGGCATTTATTTTTTTAAGAGTTTTTAGCAGTTCGAACCCCATTAGGCTTGGAATCATCAAGTTCTATACTTCAAATGGATAAATGGACTCTCCTTTTACTGAAATTGTAGCTTTGGTGAATGATAAACTACAGAGCGGTCAACTTATAATAACTTGAACGCCATTGTCTGCCCATCTGCATCCCTTCTGATTGATTATTTTGATCATAAAATATAACAGATATATTCAAGAACGCCAAACCCGGGACGCGATTTCATAGAGAAGTACAAATCATATTTGTCAAACTTCGGGTACGATCCAAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGAGTGGAATGCAACAAGCTTTGACAAATCAGTTTCCAGATTTAGGGCTGAAGGCTCCTATTGAACTCAACCCTTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAACTCTATTTCAAGTAGTAGTTCTGCTGTGCTATCCGTGTTGTTGAGCACGCTGGTTTAAACGCTAATTATTGCTTTATTTAAATTATCGATTATTTTCTCAATTGCTTTATTTAAATTATCGATTATTTTCTCA

mRNA sequence

ATGGTGCAGATTCTTCTCCAATGCTCTTCTCCTCCTCCTCCGCCTCCTTCTCCTACTTCCTCCAGGGGAATGCCTGGCAAAGTAATGTTGAAGAATGGTTTTGAGCAATCTTCTCTAAGAAAGCTTGTGTCCCAGCATGTACTCTCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGCTATCTCAGGAGATATACCTCGCCGTGAAAACTTGTGTCAGCTTGCAAGTGCAGAGAATGCTGCAGGCCTTCCTTTTGTCAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGGATGACAGCCAAAAATTTTGATCCTGTTCGATACTCAGGAAGATGGTTCGAAGTTGCATCACTTAAACGTGGATTTGCTGGCCAAGGTCAGGAAGACTGCCACTGCACCCAGGGTGTTTACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGACGGATATATAACTGGGATAAGAGGAAGAGTTCAGTGTCTTGCAGAGGAAGATTTACAGAAAAACGCAACTGAGCTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACATTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTTGCTATAGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGATATATTCAAGAACGCCAAACCCGGGACGCGATTTCATAGAGAAGTACAAATCATATTTGTCAAACTTCGGGTACGATCCAAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGAGTGGAATGCAACAAGCTTTGACAAATCAGTTTCCAGATTTAGGGCTGAAGGCTCCTATTGAACTCAACCCTTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAACTCTATTTCAAGTAG

Coding sequence (CDS)

ATGGTGCAGATTCTTCTCCAATGCTCTTCTCCTCCTCCTCCGCCTCCTTCTCCTACTTCCTCCAGGGGAATGCCTGGCAAAGTAATGTTGAAGAATGGTTTTGAGCAATCTTCTCTAAGAAAGCTTGTGTCCCAGCATGTACTCTCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGCTATCTCAGGAGATATACCTCGCCGTGAAAACTTGTGTCAGCTTGCAAGTGCAGAGAATGCTGCAGGCCTTCCTTTTGTCAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGGATGACAGCCAAAAATTTTGATCCTGTTCGATACTCAGGAAGATGGTTCGAAGTTGCATCACTTAAACGTGGATTTGCTGGCCAAGGTCAGGAAGACTGCCACTGCACCCAGGGTGTTTACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGACGGATATATAACTGGGATAAGAGGAAGAGTTCAGTGTCTTGCAGAGGAAGATTTACAGAAAAACGCAACTGAGCTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACATTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTTGCTATAGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGATATATTCAAGAACGCCAAACCCGGGACGCGATTTCATAGAGAAGTACAAATCATATTTGTCAAACTTCGGGTACGATCCAAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGAGTGGAATGCAACAAGCTTTGACAAATCAGTTTCCAGATTTAGGGCTGAAGGCTCCTATTGAACTCAACCCTTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAACTCTATTTCAAGTAG

Protein sequence

MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKKLLELYFK*

Homology

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BLAST of CsaV3_3G023260 vs. NCBI nr
Match: XP_004151949.1 (chloroplastic lipocalin isoform X1 [Cucumis sativus] >KGN57997.1 hypothetical protein Csa_009750 [Cucumis sativus])

HSP 1 Score: 672.5 bits (1734), Expect = 1.8e-189
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ 60
           MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ
Sbjct: 1   MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ 60

Query: 61  TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120
           TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF
Sbjct: 61  TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120

Query: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE 180
           EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE
Sbjct: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE 180

Query: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240
           EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY
Sbjct: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240

Query: 241 SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300
           SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF
Sbjct: 241 SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300

Query: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 331
           PDLGLKAPIELNPFTSVFDTFKKLLELYFK
Sbjct: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 330

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BLAST of CsaV3_3G023260 vs. NCBI nr
Match: XP_008454519.1 (PREDICTED: chloroplastic lipocalin [Cucumis melo])

HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181
Identity = 319/330 (96.67%), Postives = 323/330 (97.88%), Query Frame = 0


Query: 1   MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ 60
           MVQILLQCS  PPPPP PTSSRGMPGKVMLKN FEQS+LRKLVSQHVLSGFAASLIFLTQ
Sbjct: 1   MVQILLQCS--PPPPPPPTSSRGMPGKVMLKNSFEQSALRKLVSQHVLSGFAASLIFLTQ 60

Query: 61  TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120
           TNQAIS DIPR ENLCQLA+AENAA LPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF
Sbjct: 61  TNQAISVDIPRHENLCQLANAENAASLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120

Query: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE 180
           EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSP+GYITGIRGRVQCLAE
Sbjct: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPNGYITGIRGRVQCLAE 180

Query: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240
           EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY
Sbjct: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240

Query: 241 SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300
           SRTPNPGRDFIEKYKSYL+NFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF
Sbjct: 241 SRTPNPGRDFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300

Query: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 331
           PDLGLKAPIELNPFTSVFDTFKKLLELYFK
Sbjct: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 328

[Close]

BLAST of CsaV3_3G023260 vs. NCBI nr
Match: XP_038896860.1 (chloroplastic lipocalin [Benincasa hispida])

HSP 1 Score: 621.3 bits (1601), Expect = 4.8e-174
Identity = 309/326 (94.79%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 5   LLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQA 64
           LLQC S P     PTSSRGM GKVMLKNGFEQ +LRKLVSQHVLSGFAASLIFLTQTNQA
Sbjct: 13  LLQCCSSP-----PTSSRGMHGKVMLKNGFEQPALRKLVSQHVLSGFAASLIFLTQTNQA 72

Query: 65  ISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 124
           IS DIPRRENLCQLASAENAA LPF NDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS
Sbjct: 73  ISVDIPRRENLCQLASAENAASLPFDNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 132

Query: 125 LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQ 184
           LKRGFAGQGQEDCHCTQG YTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCL EEDL 
Sbjct: 133 LKRGFAGQGQEDCHCTQGAYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLPEEDLL 192

Query: 185 KNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTP 244
           KNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTP
Sbjct: 193 KNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTP 252

Query: 245 NPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 304
           NPGRDFIEKYKSYL+NFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG
Sbjct: 253 NPGRDFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 312

Query: 305 LKAPIELNPFTSVFDTFKKLLELYFK 331
           LKAPIELNPFTSVFDTFKKLLELYFK
Sbjct: 313 LKAPIELNPFTSVFDTFKKLLELYFK 333

[Close]

BLAST of CsaV3_3G023260 vs. NCBI nr
Match: XP_022139350.1 (chloroplastic lipocalin [Momordica charantia])

HSP 1 Score: 613.6 bits (1581), Expect = 9.9e-172
Identity = 300/326 (92.02%), Postives = 312/326 (95.71%), Query Frame = 0


Query: 5   LLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQA 64
           LLQCSSPP     PTSSRGMPGK MLK+GFE+ +LRKLVSQHVLSGFAASLIFLTQTNQA
Sbjct: 13  LLQCSSPP-----PTSSRGMPGKAMLKSGFERPALRKLVSQHVLSGFAASLIFLTQTNQA 72

Query: 65  ISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 124
           +S D+ R ENLCQLA+AENAA LPF + SDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS
Sbjct: 73  VSADLSRHENLCQLANAENAASLPFDSGSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 132

Query: 125 LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQ 184
           LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCL+EEDLQ
Sbjct: 133 LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLSEEDLQ 192

Query: 185 KNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTP 244
           KNATELE QEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFA+VSGAKDLSFVQIYSRTP
Sbjct: 193 KNATELENQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDLSFVQIYSRTP 252

Query: 245 NPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 304
           NPGR+FIEKYKSYL+NFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG
Sbjct: 253 NPGREFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 312

Query: 305 LKAPIELNPFTSVFDTFKKLLELYFK 331
           LKAPIELNPFTSVFDTFKKL+ELYFK
Sbjct: 313 LKAPIELNPFTSVFDTFKKLVELYFK 333

[Close]

BLAST of CsaV3_3G023260 vs. NCBI nr
Match: KAA0053105.1 (chloroplastic lipocalin [Cucumis melo var. makuwa] >TYK03315.1 chloroplastic lipocalin [Cucumis melo var. makuwa])

HSP 1 Score: 611.7 bits (1576), Expect = 3.8e-171
Identity = 299/307 (97.39%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 24  MPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQAISGDIPRRENLCQLASAEN 83
           MPGKVMLKN FEQS+LRKLVSQHVLSGFAASLIFLTQTNQAIS DIPR ENLCQLA+AEN
Sbjct: 1   MPGKVMLKNSFEQSALRKLVSQHVLSGFAASLIFLTQTNQAISVDIPRHENLCQLANAEN 60

Query: 84  AAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGV 143
           AA LPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGV
Sbjct: 61  AASLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGV 120

Query: 144 YTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLR 203
           YTFDMATPAIQVDTFCVHGSP+GYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLR
Sbjct: 121 YTFDMATPAIQVDTFCVHGSPNGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLR 180

Query: 204 FPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLSNFGY 263
           FPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYL+NFGY
Sbjct: 181 FPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLANFGY 240

Query: 264 DPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKK 323
           DPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKK
Sbjct: 241 DPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKK 300

Query: 324 LLELYFK 331
           LLELYFK
Sbjct: 301 LLELYFK 307

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BLAST of CsaV3_3G023260 vs. ExPASy Swiss-Prot
Match: Q9STS7 (Chloroplastic lipocalin OS=Arabidopsis thaliana OX=3702 GN=CHL PE=1 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 5.9e-119
Identity = 215/309 (69.58%), Postives = 252/309 (81.55%), Query Frame = 0


Query: 27  KVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQAISGDIPR-RENLCQLASA---- 86
           K  L+N FE  +LRK      +SGFAA ++ L+Q  Q I+ D+    +N+CQL SA    
Sbjct: 52  KCSLENLFEIQALRKC----FVSGFAA-ILLLSQAGQGIALDLSSGYQNICQLGSAAAVG 111

Query: 87  ENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQ 146
           EN   LP   DS+    +MMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQ
Sbjct: 112 ENKLTLPSDGDSE-SMMMMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQ 171

Query: 147 GVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCY 206
           GVYTFDM   AI+VDTFCVHGSPDGYITGIRG+VQC+  EDL+K+ T+LEKQEMIKEKC+
Sbjct: 172 GVYTFDMKESAIRVDTFCVHGSPDGYITGIRGKVQCVGAEDLEKSETDLEKQEMIKEKCF 231

Query: 207 LRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLSNF 266
           LRFPT+PFIPK PYDVIATDYDN+A+VSGAKD  FVQ+YSRTPNPG +FI KYK+YL+ F
Sbjct: 232 LRFPTIPFIPKLPYDVIATDYDNYALVSGAKDKGFVQVYSRTPNPGPEFIAKYKNYLAQF 291

Query: 267 GYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTF 326
           GYDP KIKDTPQDCEV ++++LAAMMSM GM+Q LTNQFPDLGL+  ++ +PFTSVF+T 
Sbjct: 292 GYDPEKIKDTPQDCEV-TDAELAAMMSMPGMEQTLTNQFPDLGLRKSVQFDPFTSVFETL 351

Query: 327 KKLLELYFK 331
           KKL+ LYFK
Sbjct: 352 KKLVPLYFK 353

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy Swiss-Prot
Match: P51910 (Apolipoprotein D OS=Mus musculus OX=10090 GN=Apod PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 49/172 (28.49%), Postives = 72/172 (41.86%), Query Frame = 0


Query: 108 KNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGY 167
           +NFD  +Y GRW+E+  +   F     E  +C Q  Y+  M    I+V       SPDG 
Sbjct: 35  ENFDVKKYLGRWYEIEKIPASF-----EKGNCIQANYSL-MENGNIEV--LNKELSPDGT 94

Query: 168 ITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAI 227
           +  ++G                  KQ  + E   L     P +P  PY ++ATDY+N+A+
Sbjct: 95  MNQVKGEA----------------KQSNVSEPAKLEVQFFPLMPPAPYWILATDYENYAL 154

Query: 228 VSGAK------DLSFVQIYSRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQ 274
           V           + FV I  R P    + I   K  L++ G D  K+  T Q
Sbjct: 155 VYSCTTFFWLFHVDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQ 182

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy Swiss-Prot
Match: P05090 (Apolipoprotein D OS=Homo sapiens OX=9606 GN=APOD PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.6e-07
Identity = 51/179 (28.49%), Postives = 80/179 (44.69%), Query Frame = 0


Query: 108 KNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGY 167
           +NFD  +Y GRW+E+  +   F     E+  C Q  Y+  M    I+V    +    DG 
Sbjct: 35  ENFDVNKYLGRWYEIEKIPTTF-----ENGRCIQANYSL-MENGKIKVLNQELRA--DGT 94

Query: 168 ITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAI 227
           +  I G       E    N TE  K E       ++F    F+P  PY ++ATDY+N+A+
Sbjct: 95  VNQIEG-------EATPVNLTEPAKLE-------VKFSW--FMPSAPYWILATDYENYAL 154

Query: 228 VSGAK------DLSFVQIYSRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQ-DCEVMS 280
           V           + F  I +R PN   + ++  K+ L++   D  K+  T Q +C  +S
Sbjct: 155 VYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQVNCPKLS 189

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy Swiss-Prot
Match: Q8SPI0 (Apolipoprotein D OS=Macaca fascicularis OX=9541 GN=APOD PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05
Identity = 44/177 (24.86%), Postives = 72/177 (40.68%), Query Frame = 0


Query: 108 KNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGY 167
           +NFDP +Y GRW+E+  +   F     E   C Q  Y+                      
Sbjct: 35  ENFDPNKYFGRWYEIEKIPTTF-----EKGRCIQANYSLKE------------------- 94

Query: 168 ITGIRGRVQCLAEE---DLQKNATELEKQEM-IKEKCYLRFPTLPFIPKEPYDVIATDYD 227
                G+++ L +E   D   N  E E   + I E   L      F+P  PY V+ATDY+
Sbjct: 95  ----NGKIKVLNQELRADGTVNQIEGEASPVNITEPAKLEVKFFWFMPSAPYWVLATDYE 154

Query: 228 NFAIVSGAKDL------SFVQIYSRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQD 275
           N+A+V     +       +  I +R  +   + ++  K+ L++   D  K+  T Q+
Sbjct: 155 NYALVYSCVSIINLFRVDYAWILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQE 183

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy Swiss-Prot
Match: P23593 (Apolipoprotein D OS=Rattus norvegicus OX=10116 GN=Apod PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05
Identity = 44/172 (25.58%), Postives = 68/172 (39.53%), Query Frame = 0


Query: 108 KNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGY 167
           +NFD  +Y GRW+E+  +   F     E  +C Q  Y+  M    I+V        PDG 
Sbjct: 35  ENFDVKKYLGRWYEIEKIPVSF-----EKGNCIQANYSL-MENGNIKV--LNKELRPDGT 94

Query: 168 ITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAI 227
           +  + G                  KQ  + E   L       +P  PY ++ATDY+++A+
Sbjct: 95  LNQVEGEA----------------KQSNMSEPAKLEVQFFSLMPPAPYWILATDYESYAL 154

Query: 228 VSGAK------DLSFVQIYSRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQ 274
           V           + +V I  R P    + I   K  L++   D +KI    Q
Sbjct: 155 VYSCTTFFWFFHVDYVWILGRNPYLPPETITYLKYILTSNDIDIAKITTKDQ 182

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy TrEMBL
Match: A0A0A0LBK6 (Lipocln_cytosolic_FA-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G426340 PE=3 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 8.7e-190
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ 60
           MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ
Sbjct: 1   MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ 60

Query: 61  TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120
           TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF
Sbjct: 61  TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120

Query: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE 180
           EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE
Sbjct: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE 180

Query: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240
           EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY
Sbjct: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240

Query: 241 SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300
           SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF
Sbjct: 241 SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300

Query: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 331
           PDLGLKAPIELNPFTSVFDTFKKLLELYFK
Sbjct: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 330

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy TrEMBL
Match: A0A1S3BYS9 (chloroplastic lipocalin OS=Cucumis melo OX=3656 GN=LOC103494915 PE=3 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 5.1e-182
Identity = 319/330 (96.67%), Postives = 323/330 (97.88%), Query Frame = 0


Query: 1   MVQILLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQ 60
           MVQILLQCS  PPPPP PTSSRGMPGKVMLKN FEQS+LRKLVSQHVLSGFAASLIFLTQ
Sbjct: 1   MVQILLQCS--PPPPPPPTSSRGMPGKVMLKNSFEQSALRKLVSQHVLSGFAASLIFLTQ 60

Query: 61  TNQAISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120
           TNQAIS DIPR ENLCQLA+AENAA LPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF
Sbjct: 61  TNQAISVDIPRHENLCQLANAENAASLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWF 120

Query: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAE 180
           EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSP+GYITGIRGRVQCLAE
Sbjct: 121 EVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPNGYITGIRGRVQCLAE 180

Query: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240
           EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY
Sbjct: 181 EDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIY 240

Query: 241 SRTPNPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300
           SRTPNPGRDFIEKYKSYL+NFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF
Sbjct: 241 SRTPNPGRDFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQF 300

Query: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 331
           PDLGLKAPIELNPFTSVFDTFKKLLELYFK
Sbjct: 301 PDLGLKAPIELNPFTSVFDTFKKLLELYFK 328

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy TrEMBL
Match: A0A6J1CC31 (chloroplastic lipocalin OS=Momordica charantia OX=3673 GN=LOC111010299 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.8e-172
Identity = 300/326 (92.02%), Postives = 312/326 (95.71%), Query Frame = 0


Query: 5   LLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQA 64
           LLQCSSPP     PTSSRGMPGK MLK+GFE+ +LRKLVSQHVLSGFAASLIFLTQTNQA
Sbjct: 13  LLQCSSPP-----PTSSRGMPGKAMLKSGFERPALRKLVSQHVLSGFAASLIFLTQTNQA 72

Query: 65  ISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 124
           +S D+ R ENLCQLA+AENAA LPF + SDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS
Sbjct: 73  VSADLSRHENLCQLANAENAASLPFDSGSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 132

Query: 125 LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQ 184
           LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCL+EEDLQ
Sbjct: 133 LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLSEEDLQ 192

Query: 185 KNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTP 244
           KNATELE QEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFA+VSGAKDLSFVQIYSRTP
Sbjct: 193 KNATELENQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDLSFVQIYSRTP 252

Query: 245 NPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 304
           NPGR+FIEKYKSYL+NFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG
Sbjct: 253 NPGREFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 312

Query: 305 LKAPIELNPFTSVFDTFKKLLELYFK 331
           LKAPIELNPFTSVFDTFKKL+ELYFK
Sbjct: 313 LKAPIELNPFTSVFDTFKKLVELYFK 333

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy TrEMBL
Match: A0A5D3BW66 (Chloroplastic lipocalin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold566G00030 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.8e-171
Identity = 299/307 (97.39%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 24  MPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQAISGDIPRRENLCQLASAEN 83
           MPGKVMLKN FEQS+LRKLVSQHVLSGFAASLIFLTQTNQAIS DIPR ENLCQLA+AEN
Sbjct: 1   MPGKVMLKNSFEQSALRKLVSQHVLSGFAASLIFLTQTNQAISVDIPRHENLCQLANAEN 60

Query: 84  AAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGV 143
           AA LPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGV
Sbjct: 61  AASLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGV 120

Query: 144 YTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLR 203
           YTFDMATPAIQVDTFCVHGSP+GYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLR
Sbjct: 121 YTFDMATPAIQVDTFCVHGSPNGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCYLR 180

Query: 204 FPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLSNFGY 263
           FPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYL+NFGY
Sbjct: 181 FPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLANFGY 240

Query: 264 DPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKK 323
           DPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKK
Sbjct: 241 DPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKK 300

Query: 324 LLELYFK 331
           LLELYFK
Sbjct: 301 LLELYFK 307

[Close]

BLAST of CsaV3_3G023260 vs. ExPASy TrEMBL
Match: A0A6J1IZS8 (chloroplastic lipocalin OS=Cucurbita maxima OX=3661 GN=LOC111480629 PE=3 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 7.7e-162
Identity = 289/326 (88.65%), Postives = 297/326 (91.10%), Query Frame = 0


Query: 5   LLQCSSPPPPPPSPTSSRGMPGKVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQA 64
           LLQC S P     PTS RGM  KV+LKN  EQ  LRKLVSQHVLSGFAASLIFLTQ NQA
Sbjct: 13  LLQCCSSP-----PTSVRGMHSKVILKNNIEQPPLRKLVSQHVLSGFAASLIFLTQPNQA 72

Query: 65  ISGDIPRRENLCQLASAENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 124
           IS D+ R E   QLASAEN A  PF +DSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS
Sbjct: 73  ISADLSRHEIFYQLASAENTASPPFESDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVAS 132

Query: 125 LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQ 184
           LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCL+EEDLQ
Sbjct: 133 LKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLSEEDLQ 192

Query: 185 KNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTP 244
           KNATELE +EMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFA+VSGAKDLSFVQIYSRTP
Sbjct: 193 KNATELENREMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDLSFVQIYSRTP 252

Query: 245 NPGRDFIEKYKSYLSNFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 304
           NPG +FIEKYKSYL+NFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG
Sbjct: 253 NPGPEFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLG 312

Query: 305 LKAPIELNPFTSVFDTFKKLLELYFK 331
           L API LNPFTSVFDTFKKLLELYFK
Sbjct: 313 LDAPIALNPFTSVFDTFKKLLELYFK 333

[Close]

BLAST of CsaV3_3G023260 vs. TAIR 10
Match: AT3G47860.1 (chloroplastic lipocalin )

HSP 1 Score: 428.7 bits (1101), Expect = 4.2e-120
Identity = 215/309 (69.58%), Postives = 252/309 (81.55%), Query Frame = 0


Query: 27  KVMLKNGFEQSSLRKLVSQHVLSGFAASLIFLTQTNQAISGDIPR-RENLCQLASA---- 86
           K  L+N FE  +LRK      +SGFAA ++ L+Q  Q I+ D+    +N+CQL SA    
Sbjct: 52  KCSLENLFEIQALRKC----FVSGFAA-ILLLSQAGQGIALDLSSGYQNICQLGSAAAVG 111

Query: 87  ENAAGLPFVNDSDGGGRLMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQ 146
           EN   LP   DS+    +MMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQ
Sbjct: 112 ENKLTLPSDGDSE-SMMMMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQ 171

Query: 147 GVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLAEEDLQKNATELEKQEMIKEKCY 206
           GVYTFDM   AI+VDTFCVHGSPDGYITGIRG+VQC+  EDL+K+ T+LEKQEMIKEKC+
Sbjct: 172 GVYTFDMKESAIRVDTFCVHGSPDGYITGIRGKVQCVGAEDLEKSETDLEKQEMIKEKCF 231

Query: 207 LRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLSNF 266
           LRFPT+PFIPK PYDVIATDYDN+A+VSGAKD  FVQ+YSRTPNPG +FI KYK+YL+ F
Sbjct: 232 LRFPTIPFIPKLPYDVIATDYDNYALVSGAKDKGFVQVYSRTPNPGPEFIAKYKNYLAQF 291

Query: 267 GYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTF 326
           GYDP KIKDTPQDCEV ++++LAAMMSM GM+Q LTNQFPDLGL+  ++ +PFTSVF+T 
Sbjct: 292 GYDPEKIKDTPQDCEV-TDAELAAMMSMPGMEQTLTNQFPDLGLRKSVQFDPFTSVFETL 351

Query: 327 KKLLELYFK 331
           KKL+ LYFK
Sbjct: 352 KKLVPLYFK 353

The following BLAST results are available for this feature:

BLAST of CsaV3_3G023260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151949.1	1.8e-189	100.00	chloroplastic lipocalin isoform X1 [Cucumis sativus] >KGN57997.1 hypothetical pr...	[more]
XP_008454519.1	1.1e-181	96.67	PREDICTED: chloroplastic lipocalin [Cucumis melo]	[more]
XP_038896860.1	4.8e-174	94.79	chloroplastic lipocalin [Benincasa hispida]	[more]
XP_022139350.1	9.9e-172	92.02	chloroplastic lipocalin [Momordica charantia]	[more]
KAA0053105.1	3.8e-171	97.39	chloroplastic lipocalin [Cucumis melo var. makuwa] >TYK03315.1 chloroplastic lip...	[more]

BLAST of CsaV3_3G023260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STS7	5.9e-119	69.58	Chloroplastic lipocalin OS=Arabidopsis thaliana OX=3702 GN=CHL PE=1 SV=1	[more]
P51910	1.0e-09	28.49	Apolipoprotein D OS=Mus musculus OX=10090 GN=Apod PE=1 SV=1	[more]
P05090	3.6e-07	28.49	Apolipoprotein D OS=Homo sapiens OX=9606 GN=APOD PE=1 SV=1	[more]
Q8SPI0	2.0e-05	24.86	Apolipoprotein D OS=Macaca fascicularis OX=9541 GN=APOD PE=2 SV=1	[more]
P23593	2.6e-05	25.58	Apolipoprotein D OS=Rattus norvegicus OX=10116 GN=Apod PE=1 SV=1	[more]

BLAST of CsaV3_3G023260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBK6	8.7e-190	100.00	Lipocln_cytosolic_FA-bd_dom domain-containing protein OS=Cucumis sativus OX=3659...	[more]
A0A1S3BYS9	5.1e-182	96.67	chloroplastic lipocalin OS=Cucumis melo OX=3656 GN=LOC103494915 PE=3 SV=1	[more]
A0A6J1CC31	4.8e-172	92.02	chloroplastic lipocalin OS=Momordica charantia OX=3673 GN=LOC111010299 PE=3 SV=1	[more]
A0A5D3BW66	1.8e-171	97.39	Chloroplastic lipocalin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1IZS8	7.7e-162	88.65	chloroplastic lipocalin OS=Cucurbita maxima OX=3661 GN=LOC111480629 PE=3 SV=1	[more]

BLAST of CsaV3_3G023260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47860.1	4.2e-120	69.58	chloroplastic lipocalin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 178..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..26
None	No IPR available	PANTHER	PTHR11430:SF32	CHLOROPLASTIC LIPOCALIN	coord: 24..330
None	No IPR available	CDD	cd19851	lipocalin_CHL	coord: 102..242 e-value: 2.80341E-89 score: 261.972
IPR012674	Calycin	GENE3D	2.40.128.20		coord: 105..287 e-value: 3.1E-36 score: 127.2
IPR012674	Calycin	SUPERFAMILY	50814	Lipocalins	coord: 106..286
IPR000566	Lipocalin/cytosolic fatty-acid binding domain	PFAM	PF08212	Lipocalin_2	coord: 113..273 e-value: 8.5E-9 score: 35.6
IPR002345	Lipocalin	PANTHER	PTHR11430	LIPOCALIN	coord: 24..330
IPR022272	Lipocalin family conserved site	PROSITE	PS00213	LIPOCALIN	coord: 109..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G023260.1	CsaV3_3G023260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0036094	small molecule binding