CsaV3_3G023230 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G023230
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CTD small phosphatase-like protein
Location	chr3: 20766719 .. 20768067 (-)
RNA-Seq Expression	CsaV3_3G023230
Synteny	CsaV3_3G023230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAATTCAACCCTCTCTCTCTCTCATCCTTCATTCATTCTTCATATGGCCAATGAGAACTCCACCAATAATAATTCCCTTAACTATCACGGTGAAGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACACAGACAACCCTAACTCTCATAATCAATCACTCACTTCCTTCTCAGCTTCCTCCCACTTTTCTCTTGATGTCACGGACGCTGCCTCCTCCGTCGCCCATCGTAAACTACCTCATGACCACAACGACCAAGTTTCCGAACAACCCGGGTTCGGTTACAAGGATGATGATCATATCAACTTTTTTAAGAAGAGGAAGATGATCAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGGTCTCTCTCTCTCTCTCTCTCTTTAATTTCTTTATTCTATTTTTGTTGTTAATTACCATAGGAATAGAGAAGATTAAATTTATTAAACTCAGATTCCTCATTTGTTAATCAACAGATATGATTGTAACAAATGTTGTGTTACAATTCTTCTTTTCAACCTATAAAAATCAATCATTACATTGATTTTTAATTACTATATTAAAAAACAATAATAAAAGTGACTTTAACGACCGTTTTAAAATCTCTCCCATATACCGTAAATAGGATAAGATTTTCTGTTTTATTGATCCTATGATATTATTTCTTTTTCTCAAATCAATTTTAAATTCATCCAAACTCTCGACTTTCGCTTAAGTTTTTGAGTTCAATAGTATTTTAACGATGTCGGGTTTGGGCTGATATATGAGTTTTCTTTGGTCTAAATATATACAGATATCTGGTTCAACCTACTTTAGCAAGAACCAGAAGCACAGAGACAATTTAATAGCTCCTGAGGTAAATATATATAGTGGTTTTTGTTTTTAATTTTCATTTAATTTACTCAAGCAGAAGAGAGTGGAAATAAGTTTTGGAAAAATATTAAATAATGCAAGTGTTTTGTTTTTTTTTTTTTTTGGTGCAGGTGGAGGAGAGAAGAGAAATGGATAATCTTATTGGAATTGGCAATGACTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTACCTCAATAACTCTCCTTTCTCTTATCTCTCTTCTTTATGTAAATATTGATCATTTGATGAAGGGTTATTGTGTATTCTATGTACAAAATGTGCATGTTGTAATATGATTGTAATCAAGTGAAGGCATTAGAAGAGAGAAAAGCATATGTATAAATTACTCATAATCTTTTTAGTTGTTTACTTTTATCTTTCTCAAATGGG

mRNA sequence

ATGGCCAATGAGAACTCCACCAATAATAATTCCCTTAACTATCACGGTGAAGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACACAGACAACCCTAACTCTCATAATCAATCACTCACTTCCTTCTCAGCTTCCTCCCACTTTTCTCTTGATGTCACGGACGCTGCCTCCTCCGTCGCCCATCGTAAACTACCTCATGACCACAACGACCAAGTTTCCGAACAACCCGGGTTCGGTTACAAGGATGATGATCATATCAACTTTTTTAAGAAGAGGAAGATGATCAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGATATCTGGTTCAACCTACTTTAGCAAGAACCAGAAGCACAGAGACAATTTAATAGCTCCTGAGGTGGAGGAGAGAAGAGAAATGGATAATCTTATTGGAATTGGCAATGACTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTACCTCAATAA

Coding sequence (CDS)

ATGGCCAATGAGAACTCCACCAATAATAATTCCCTTAACTATCACGGTGAAGAATCGCCGGAGGACAGTGGGTGGACCATTTACTTTGAAGATTTCCTCAACACAGACAACCCTAACTCTCATAATCAATCACTCACTTCCTTCTCAGCTTCCTCCCACTTTTCTCTTGATGTCACGGACGCTGCCTCCTCCGTCGCCCATCGTAAACTACCTCATGACCACAACGACCAAGTTTCCGAACAACCCGGGTTCGGTTACAAGGATGATGATCATATCAACTTTTTTAAGAAGAGGAAGATGATCAAAGAGTTGTTTGTTAAAGATGAAGCTTTGGAGGATACTGCTAGCTCTCCTGTTAATAGTCCCAAGATATCTGGTTCAACCTACTTTAGCAAGAACCAGAAGCACAGAGACAATTTAATAGCTCCTGAGGTGGAGGAGAGAAGAGAAATGGATAATCTTATTGGAATTGGCAATGACTACACAGAACTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCTATGGTTCTTAATTATTTACCTCAATAA

Protein sequence

MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNYLPQ*

Homology

[Close]

BLAST of CsaV3_3G023230 vs. NCBI nr
Match: XP_031739077.1 (vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical protein Csa_010736 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 5.3e-98
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD
Sbjct: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN
Sbjct: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180
           SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY
Sbjct: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180

Query: 181 LPQ 184
           LPQ
Sbjct: 181 LPQ 183

[Close]

BLAST of CsaV3_3G023230 vs. NCBI nr
Match: XP_008454531.1 (PREDICTED: uncharacterized protein LOC103494923 [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 1.3e-80
Identity = 159/183 (86.89%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPVN
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVN 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180
           SPK+S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGLCLVPLSMVLNY
Sbjct: 121 SPKVSCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNY 180

Query: 181 LPQ 184
           LPQ
Sbjct: 181 LPQ 181

[Close]

BLAST of CsaV3_3G023230 vs. NCBI nr
Match: TYK29959.1 (uncharacterized protein E5676_scaffold588G00240 [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 5.7e-76
Identity = 155/183 (84.70%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPV 
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPV- 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180
               S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGLCLVPLSMVLNY
Sbjct: 121 ----SCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNY 176

Query: 181 LPQ 184
           LPQ
Sbjct: 181 LPQ 176

[Close]

BLAST of CsaV3_3G023230 vs. NCBI nr
Match: KAA0053082.1 (uncharacterized protein E6C27_scaffold778G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 2.8e-67
Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPV 
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPV- 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGL 170
               S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGL
Sbjct: 121 ----SCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGL 162

[Close]

BLAST of CsaV3_3G023230 vs. NCBI nr
Match: XP_038899309.1 (vascular-related unknown protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 237.7 bits (605), Expect = 8.2e-59
Identity = 133/187 (71.12%), Postives = 151/187 (80.75%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLD--- 60
           MA ENST N+SL + G+ SPE+SGWTIYFEDFLNT+  +S +Q  TSFS SSHFS D   
Sbjct: 1   MAKENST-NDSLYHGGDPSPEESGWTIYFEDFLNTN--HSSHQPPTSFS-SSHFSFDQSY 60

Query: 61  -VTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTAS 120
            V DAASSV   KLP D ND+ +  PGFGYK  DHINFFKKRKMIKELFV+DEALEDTAS
Sbjct: 61  SVADAASSVPDHKLPVD-NDEAALDPGFGYK--DHINFFKKRKMIKELFVEDEALEDTAS 120

Query: 121 SPVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSM 180
           SPVNSPK+  STYFSKNQKH++NL  PEV+ERREM N +G+GNDY ELKKRGLCLVPLSM
Sbjct: 121 SPVNSPKVCDSTYFSKNQKHKENLRTPEVDERREMGNFVGMGNDYRELKKRGLCLVPLSM 180

Query: 181 VLNYLPQ 184
           V+NY  +
Sbjct: 181 VVNYFAE 180

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-12
Identity = 67/187 (35.83%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 4   ENSTNN-------NSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSL 63
           E+S NN        +  +  +++PE+S WT+YFEDF      +S    +  FS+SS    
Sbjct: 2   ESSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEA---SSSIVDVGDFSSSS---- 61

Query: 64  DVTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKEL-FVKDEALEDTA 123
            V+DAAS VA +K  +     VS+Q G         N   KR   +E+ F +   LEDTA
Sbjct: 62  -VSDAASFVATKKTLN-----VSKQEG--------SNLDIKRTRNREIPFGRHHDLEDTA 121

Query: 124 SSPVNSPKI-SGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPL 182
           SSP  SP + S       N +H   ++  + +    + N  G+  D   LKK+GLCLVPL
Sbjct: 122 SSPSGSPNVYSMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPID---LKKKGLCLVPL 164

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.8e-09
Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 0


Query: 15  HGEESPEDSGWTIYFEDFLN----TDNPNSHNQSLTSFSASSHFSLDVTDAAS-SVAHRK 74
           HG +  E+SGWT Y +DF N    T +  + +Q  +S+S  +  +  V+DAA+ + + + 
Sbjct: 30  HGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKS 89

Query: 75  LPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIK---ELFVKDEALEDTASSPVNSPKISG 134
            P                    +NF  K K  +   +   +D++LEDTASSPVNSPK+S 
Sbjct: 90  FP--------------------VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSH 149

Query: 135 STYFSKNQKHRDNLIAP---------------EVEERRE-----MDNLI----GIGNDYT 181
             +     +  ++ ++                +++E  E     M NLI       N+  
Sbjct: 150 FEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNM 207

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy Swiss-Prot
Match: Q9C6I7 (Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.4e-06
Identity = 55/188 (29.26%), Postives = 86/188 (45.74%), Query Frame = 0


Query: 7   TNNNSLNYHGEESPEDSGWTIYFED------FLNTDNPNSHNQSLTSFSASSHFSLDVTD 66
           +N+     H EE  E+S W +YFED       + T+   +H     S   S   S   T 
Sbjct: 15  SNHQIRMIHEEEDHEESSWIVYFEDIDHDDEMVETEGEMTHYYDNDSSMISDAASPVHTT 74

Query: 67  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 126
             ++V  RK  + + +    +    +K+++     K  +       ++E  EDTASSP N
Sbjct: 75  KINNVVRRKANNINTNPKKRRIIHQHKEEEEEELQKGEE-------EEEDEEDTASSPSN 134

Query: 127 SPKISGSTYFSKNQ----KHRDNLIAPEVEERREMDNLI-GIGND--YTELKKRGLCLVP 182
             KI      + +     K  DN+ + E+    E  + I  I N+    ELKKRGLC+VP
Sbjct: 135 KTKIFSVLDHANDNTRYGKTMDNVTSEEIGCITETGSKIKEIMNEEFSAELKKRGLCVVP 194

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy Swiss-Prot
Match: Q56YT7 (Vascular-related unknown protein 3 OS=Arabidopsis thaliana OX=3702 GN=VUP3 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.2e-05
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 112 EDTASSPVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCL 171
           EDTASSP N  +  G +    N      +   ++EE+    N I I     ELKKRGLCL
Sbjct: 62  EDTASSPSN--RTEGYSGMEDNTIEEKTMNNGKIEEKILNKNGIKIEEYCAELKKRGLCL 121

Query: 172 VPLSMVLNYL 182
           VPLSM+ NY+
Sbjct: 122 VPLSMLSNYI 129

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy TrEMBL
Match: A0A1S3BZL3 (uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.3e-81
Identity = 159/183 (86.89%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPVN
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPVN 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180
           SPK+S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGLCLVPLSMVLNY
Sbjct: 121 SPKVSCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNY 180

Query: 181 LPQ 184
           LPQ
Sbjct: 181 LPQ 181

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy TrEMBL
Match: A0A5D3E2F7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold588G00240 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.7e-76
Identity = 155/183 (84.70%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPV 
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPV- 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLNY 180
               S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGLCLVPLSMVLNY
Sbjct: 121 ----SCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGLCLVPLSMVLNY 176

Query: 181 LPQ 184
           LPQ
Sbjct: 181 LPQ 176

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy TrEMBL
Match: A0A5A7UBG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold778G00060 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67
Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSLDVTD 60
           MANENST+NNSLNYHG+ESPEDSGWTIYFEDFLN++N NSHNQSLTSFS SSHFSLDV D
Sbjct: 1   MANENSTDNNSLNYHGDESPEDSGWTIYFEDFLNSNNSNSHNQSLTSFS-SSHFSLDVND 60

Query: 61  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 120
           AASS+AH KLPHDHNDQV+ QP FGYKDDDHIN FKKRKMIKELFVKDEALEDTASSPV 
Sbjct: 61  AASSIAHHKLPHDHNDQVAVQPEFGYKDDDHINVFKKRKMIKELFVKDEALEDTASSPV- 120

Query: 121 SPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGL 170
               S STYFSKNQ  +DNLI PEVEER+EM +LI IGN YTELKKRGL
Sbjct: 121 ----SCSTYFSKNQ-DKDNLIVPEVEERKEMGDLIEIGNKYTELKKRGL 162

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy TrEMBL
Match: A0A6J1FG95 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.1e-47
Identity = 111/184 (60.33%), Postives = 134/184 (72.83%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNP-NSHNQSLTSFSASSHFSLDVT 60
           MA E+S  + S+ + G++S E+SGWTIYFEDFLN  +P N    S +SF  S   S  + 
Sbjct: 1   MAKESSA-HTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIA 60

Query: 61  DAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPV 120
           DAASSV   KL  +H D  +  PGF  K  DHINFFKKRKMI E+FV DEALEDTASSPV
Sbjct: 61  DAASSVVDHKLLENH-DGAAMDPGFSCK--DHINFFKKRKMIYEVFVDDEALEDTASSPV 120

Query: 121 NSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMVLN 180
           NSPK+  S YFSKN +H+  LI P+V ERRE+ +LIGIG++YTELKKRGLCLVP SM+LN
Sbjct: 121 NSPKVCDSNYFSKNPRHKGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILN 180

Query: 181 YLPQ 184
           Y+ Q
Sbjct: 181 YMDQ 180

[Close]

BLAST of CsaV3_3G023230 vs. ExPASy TrEMBL
Match: A0A6J1IHA8 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46
Identity = 113/186 (60.75%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 1   MANENSTNNNSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSA---SSHFSLD 60
           MA E+S  + SL + G++S E+SGWTIYFEDFLN  +P   NQ  TSFS+   S   S  
Sbjct: 1   MAKESSA-HTSLFHGGDQSSEESGWTIYFEDFLNNHHPT--NQPPTSFSSYPPSPDQSYP 60

Query: 61  VTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASS 120
           V DAASSV   KL  +H D  +  PGF  K  DHINFFKKRKMI EL V DEALEDTASS
Sbjct: 61  VADAASSVVDHKLLGNH-DGAAMGPGFSCK--DHINFFKKRKMIYELLVDDEALEDTASS 120

Query: 121 PVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPLSMV 180
           PVNSPK+  S YFSKN +H+  LI P+V+ERR++ +LIGIG++YTELKKRGLCLVP SM+
Sbjct: 121 PVNSPKVCDSNYFSKNPRHKGKLITPQVDERRDIGDLIGIGSEYTELKKRGLCLVPFSMI 180

Query: 181 LNYLPQ 184
           +NY+ Q
Sbjct: 181 INYMDQ 180

[Close]

BLAST of CsaV3_3G023230 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-13
Identity = 67/187 (35.83%), Postives = 95/187 (50.80%), Query Frame = 0


Query: 4   ENSTNN-------NSLNYHGEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASSHFSL 63
           E+S NN        +  +  +++PE+S WT+YFEDF      +S    +  FS+SS    
Sbjct: 2   ESSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEA---SSSIVDVGDFSSSS---- 61

Query: 64  DVTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKEL-FVKDEALEDTA 123
            V+DAAS VA +K  +     VS+Q G         N   KR   +E+ F +   LEDTA
Sbjct: 62  -VSDAASFVATKKTLN-----VSKQEG--------SNLDIKRTRNREIPFGRHHDLEDTA 121

Query: 124 SSPVNSPKI-SGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCLVPL 182
           SSP  SP + S       N +H   ++  + +    + N  G+  D   LKK+GLCLVPL
Sbjct: 122 SSPSGSPNVYSMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPID---LKKKGLCLVPL 164

[Close]

BLAST of CsaV3_3G023230 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 3.4e-10
Identity = 56/198 (28.28%), Postives = 94/198 (47.47%), Query Frame = 0


Query: 15  HGEESPEDSGWTIYFEDFLN----TDNPNSHNQSLTSFSASSHFSLDVTDAAS-SVAHRK 74
           HG +  E+SGWT Y +DF N    T +  + +Q  +S+S  +  +  V+DAA+ + + + 
Sbjct: 30  HGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKS 89

Query: 75  LPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIK---ELFVKDEALEDTASSPVNSPKISG 134
            P                    +NF  K K  +   +   +D++LEDTASSPVNSPK+S 
Sbjct: 90  FP--------------------VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSH 149

Query: 135 STYFSKNQKHRDNLIAP---------------EVEERRE-----MDNLI----GIGNDYT 181
             +     +  ++ ++                +++E  E     M NLI       N+  
Sbjct: 150 FEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNM 207

[Close]

BLAST of CsaV3_3G023230 vs. TAIR 10
Match: AT1G50930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 6.0e-07
Identity = 55/188 (29.26%), Postives = 86/188 (45.74%), Query Frame = 0


Query: 7   TNNNSLNYHGEESPEDSGWTIYFED------FLNTDNPNSHNQSLTSFSASSHFSLDVTD 66
           +N+     H EE  E+S W +YFED       + T+   +H     S   S   S   T 
Sbjct: 15  SNHQIRMIHEEEDHEESSWIVYFEDIDHDDEMVETEGEMTHYYDNDSSMISDAASPVHTT 74

Query: 67  AASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIKELFVKDEALEDTASSPVN 126
             ++V  RK  + + +    +    +K+++     K  +       ++E  EDTASSP N
Sbjct: 75  KINNVVRRKANNINTNPKKRRIIHQHKEEEEEELQKGEE-------EEEDEEDTASSPSN 134

Query: 127 SPKISGSTYFSKNQ----KHRDNLIAPEVEERREMDNLI-GIGND--YTELKKRGLCLVP 182
             KI      + +     K  DN+ + E+    E  + I  I N+    ELKKRGLC+VP
Sbjct: 135 KTKIFSVLDHANDNTRYGKTMDNVTSEEIGCITETGSKIKEIMNEEFSAELKKRGLCVVP 194

[Close]

BLAST of CsaV3_3G023230 vs. TAIR 10
Match: AT3G20557.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 112 EDTASSPVNSPKISGSTYFSKNQKHRDNLIAPEVEERREMDNLIGIGNDYTELKKRGLCL 171
           EDTASSP N  +  G +    N      +   ++EE+    N I I     ELKKRGLCL
Sbjct: 62  EDTASSPSN--RTEGYSGMEDNTIEEKTMNNGKIEEKILNKNGIKIEEYCAELKKRGLCL 121

Query: 172 VPLSMVLNYL 182
           VPLSM+ NY+
Sbjct: 122 VPLSMLSNYI 129

[Close]

BLAST of CsaV3_3G023230 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 3.9e-06
Identity = 39/119 (32.77%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 15  HGEESPEDSGWTIYFEDFLN----TDNPNSHNQSLTSFSASSHFSLDVTDAAS-SVAHRK 74
           HG +  E+SGWT Y +DF N    T +  + +Q  +S+S  +  +  V+DAA+ + + + 
Sbjct: 30  HGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKS 89

Query: 75  LPHDHNDQVSEQPGFGYKDDDHINFFKKRKMIK---ELFVKDEALEDTASSPVNSPKIS 126
            P                    +NF  K K  +   +   +D++LEDTASSPVNSPK+S
Sbjct: 90  FP--------------------VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVS 128

The following BLAST results are available for this feature:

BLAST of CsaV3_3G023230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031739077.1	5.3e-98	100.00	vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical pr...	[more]
XP_008454531.1	1.3e-80	86.89	PREDICTED: uncharacterized protein LOC103494923 [Cucumis melo]	[more]
TYK29959.1	5.7e-76	84.70	uncharacterized protein E5676_scaffold588G00240 [Cucumis melo var. makuwa]	[more]
KAA0053082.1	2.8e-67	83.43	uncharacterized protein E6C27_scaffold778G00060 [Cucumis melo var. makuwa]	[more]
XP_038899309.1	8.2e-59	71.12	vascular-related unknown protein 4-like isoform X1 [Benincasa hispida]	[more]

BLAST of CsaV3_3G023230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5BPG5	6.0e-12	35.83	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]
Q9LSZ3	4.8e-09	28.28	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]
Q9C6I7	8.4e-06	29.26	Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 ...	[more]
Q56YT7	4.2e-05	44.29	Vascular-related unknown protein 3 OS=Arabidopsis thaliana OX=3702 GN=VUP3 PE=2 ...	[more]

BLAST of CsaV3_3G023230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZL3	6.3e-81	86.89	uncharacterized protein LOC103494923 OS=Cucumis melo OX=3656 GN=LOC103494923 PE=...	[more]
A0A5D3E2F7	2.7e-76	84.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UBG9	1.4e-67	83.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1FG95	2.1e-47	60.33	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1	[more]
A0A6J1IHA8	1.3e-46	60.75	Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1	[more]

BLAST of CsaV3_3G023230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54790.1	4.3e-13	35.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G21710.2	3.4e-10	28.28	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT1G50930.1	6.0e-07	29.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G20557.1	3.0e-06	44.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G21710.1	3.9e-06	32.77	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 5..181
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 5..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G023230.1	CsaV3_3G023230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development