CsaV3_3G023120 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G023120
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein NDR1-like
Location	chr3: 20632920 .. 20634105 (-)
RNA-Seq Expression	CsaV3_3G023120
Synteny	CsaV3_3G023120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAAAAAAAATGGTGCATTTGGTTTAGGGCGCTATATTTGTGTTATATACACATATATAGTTTTGAAAGATTTGTATTACAATTTACAACTTTTGGAGAGGGAAAAAGAGTTGCCTTCCCTCCACTAAGTTTTCTTAATCTGTGGTCGGTCCCATCCCATCCCATCTGGGCTCTCTTTTCTTTACCCCCAACAGCATTATTGTACCCTTTTTTTTATTCTCTTCTCATTTCTTTCTTCTTTTTCTTCTCCATTCTCACCGGAACCTATTTCTTATTCTCTGGCAAACATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCTTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGAAAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGGTGTTTGTTTTGTGGATAATTTTTTGAAATTAAACCTCAACTGTGTTTCTTGTTGTGGGTTTGTTTGATTTAGTCGAATTTTTGGGCGGCGTTTTTAGTCGGAAGTGTTCTCCACCGCCCACTCACGGCTGACGTTAGATGGTACATAAATTAATTTTTGGTTGAATAAAATATTTATGTGTTCCATTTTGGAAAGTTTTATTTTAGTCAAATTACAACTTATCTCGCATTTCTCCCTATTTTATTTCTATTTTGATTTTTAAGGCTTTTAAAGCATGAAATAGGGAGGATAGCCATTTTAGAAATAATAAT

mRNA sequence

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCTTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGAAAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGGTGTTTGTTTTGTGGATAATTTTTTGA

Coding sequence (CDS)

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCTTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGAAAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGGTGTTTGTTTTGTGGATAATTTTTTGA

Protein sequence

MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGAAVPVGSLVRVIWSFWVFVLWIIF*

Homology

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: XP_004152027.1 (protein NDR1 [Cucumis sativus] >KAE8650698.1 hypothetical protein Csa_011410 [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 6.7e-110
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 AVPVGSLVRVIWSFWVFVLWIIF 204
           AVPVGSLVRVIWSFWVFVLWIIF
Sbjct: 181 AVPVGSLVRVIWSFWVFVLWIIF 203

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: XP_008454544.1 (PREDICTED: protein NDR1-like [Cucumis melo] >KAA0046485.1 protein NDR1-like [Cucumis melo var. makuwa] >TYJ97726.1 protein NDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 367.9 bits (943), Expect = 5.8e-98
Identity = 181/201 (90.05%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNK+KSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLVRVIWSFWVFVLW 201
           AA+P G+LVRVIWSFWVFV W
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWW 201

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: XP_038897087.1 (protein NDR1-like [Benincasa hispida])

HSP 1 Score: 342.4 bits (877), Expect = 2.6e-90
Identity = 170/203 (83.74%), Postives = 179/203 (88.18%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M ESGWCC CCFKFIIT GF+ALFLWLSLRT KPKCSIEFFYIPALNQSLNS SNS+L+F
Sbjct: 1   MTESGWCCHCCFKFIITTGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLNSPSNSTLLF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLL---DETRRLVGNLTVPGFHQGRDKKALRKESFEAR 120
           DLRLKNQNK+KSVYYD+I LNLTL+   D TRR VGNLTVPGFHQGRDKKA RKE+ EAR
Sbjct: 61  DLRLKNQNKDKSVYYDSISLNLTLVGAPDGTRRPVGNLTVPGFHQGRDKKAFRKETVEAR 120

Query: 121 GVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLN 180
           GVDWKAVSRNG  V+RLD ATAVRYKIL WKTKRENLRLG EVKVN QG KD P  ITLN
Sbjct: 121 GVDWKAVSRNGPVVVRLDFATAVRYKILFWKTKRENLRLGAEVKVNRQGEKDYPRSITLN 180

Query: 181 SGAAVPVGSLVRVIWSFWVFVLW 201
           SGAAVP GSL+RVIWSFWVFVLW
Sbjct: 181 SGAAVPSGSLMRVIWSFWVFVLW 203

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.6 bits (771), Expect = 5.1e-78
Identity = 152/207 (73.43%), Postives = 173/207 (83.57%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M E G CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDE----TRRLVGNLTVPGFHQGRDKKALRKESFEA 120
           DLRLKNQNK+KSV+YD++ LNLTL+      +RR +GN+TVPGFHQGR KKA R E+ E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL 180
           RGVDWKAVSRNG+ V RLDLATAVR+KIL W TKRENLR+G E KVNEQG  + P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 NSGAAVPVGSLVRVIWSFWVFVLWIIF 204
           +SGAAVP GS VRVIWSFWVFVLW +F
Sbjct: 181 SSGAAVPDGSPVRVIWSFWVFVLWKLF 206

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BLAST of CsaV3_3G023120 vs. NCBI nr
Match: KAG6592022.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 152/207 (73.43%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M E G CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDE----TRRLVGNLTVPGFHQGRDKKALRKESFEA 120
           DLRLKNQNK+KSV+YD++ LNLTL+      +RR +GN+TVPGFHQGR KKA R E  E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120

Query: 121 RGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL 180
           RGVDWKAVSRNG+ V RLDLATAVR+KIL W TKRENLR+G E KVNEQG  + P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 NSGAAVPVGSLVRVIWSFWVFVLWIIF 204
           +SGAAVP GS VRVIWSFWVFVLW +F
Sbjct: 181 SSGAAVPDGSPVRVIWSFWVFVLWKLF 206

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BLAST of CsaV3_3G023120 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC CC  FI TAG ++LFLWLSLR  KPKCSI+ F+IPAL +  NS  N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKEKSVYYDTIYLNLTLLDETR------RLVGNLTVPGFHQGRDKKALRKESFEA--RG 126
            NK+K +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL-N 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VN  GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 SGAAVPVGSL--VRVIWSFWVF 198
           S ++ P+ S   + V+ +  VF
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVF 215

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BLAST of CsaV3_3G023120 vs. ExPASy TrEMBL
Match: A0A0A0L886 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.8e-100
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 AVPVGSLVRVIWSFWVFVL 200
           AVPVGSL     +FW   L
Sbjct: 181 AVPVGSLS----NFWAAFL 195

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BLAST of CsaV3_3G023120 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.8e-98
Identity = 181/201 (90.05%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNK+KSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLVRVIWSFWVFVLW 201
           AA+P G+LVRVIWSFWVFV W
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWW 201

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BLAST of CsaV3_3G023120 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.8e-98
Identity = 181/201 (90.05%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNK+KSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLVRVIWSFWVFVLW 201
           AA+P G+LVRVIWSFWVFV W
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWW 201

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BLAST of CsaV3_3G023120 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.2e-78
Identity = 151/207 (72.95%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M E G CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDE----TRRLVGNLTVPGFHQGRDKKALRKESFEA 120
           DLRLKNQNK+KSV+YD++ LNLTL+      +RR +GN+TVPGFHQGR KKA R E+ E 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL 180
           RGVDWKAVSRNG+ V RLDLATAVR+KIL W TKRENLR+G E KVNEQG  + P GITL
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180

Query: 181 NSGAAVPVGSLVRVIWSFWVFVLWIIF 204
           +SG AVP GS VRVIWSFWVFVLW +F
Sbjct: 181 SSGVAVPDGSPVRVIWSFWVFVLWKLF 206

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BLAST of CsaV3_3G023120 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 8.0e-77
Identity = 150/203 (73.89%), Postives = 171/203 (84.24%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M ESG CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNK+KSV+YD++ LNLTL+    R +GN+TVPGFHQGR KKA R E+ EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG--GRPLGNVTVPGFHQGRGKKAFRNETIEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGS + RLDLATAVR+KIL W TKRENLR+G E KVN+QG  + P GITL+SGA
Sbjct: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLSSGA 180

Query: 181 AVPVGSLVRVIWSFWVFVLWIIF 204
           AVP GS V VIWS WVFVLW +F
Sbjct: 181 AVPDGSPVTVIWSSWVFVLWKLF 200

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BLAST of CsaV3_3G023120 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 161.4 bits (407), Expect = 7.7e-40
Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC CC  FI TAG ++LFLWLSLR  KPKCSI+ F+IPAL +  NS  N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKEKSVYYDTIYLNLTLLDETR------RLVGNLTVPGFHQGRDKKALRKESFEA--RG 126
            NK+K +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITL-N 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VN  GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 SGAAVPVGSL--VRVIWSFWVF 198
           S ++ P+ S   + V+ +  VF
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of CsaV3_3G023120 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 85/185 (45.95%), Postives = 112/185 (60.54%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC C FKFI T    AL LWLSLR +KPKCSI+ FYIPAL+++L+S  N++L F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKEKSVYYDTIYLNLTLLDETRR------LVGNLTVPGFHQGRDKKALRKESFEARGVD 126
            NK+K +YYD ++L  + ++ T        LV N TVP F+QG  KKA      +  G  
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKA------KKWGQV 133

Query: 127 W--------KAVSRNGSTVIRLDLATAVRYKILLWKTK-RENLRLGTEVKVNEQGVKDNP 177
           W        +AV  NGS V RLDL T VR+KI+ WKTK    +++G +V+VN  GVK N 
Sbjct: 134 WPLNNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVKANE 192

[Close]

BLAST of CsaV3_3G023120 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27
Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 0


Query: 22  ALFLWLS-LRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKNQNKEKSVYYDTIYL 81
           AL LWLS L    P+CSI +FYIPALN+SL SS N++L F +RLKN N ++ +YY+ ++L
Sbjct: 28  ALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQGIYYEDLHL 87

Query: 82  NL-TLLDETRRLVGNLTVPGFHQGRDKKALR---KESFEARGVDWKAVSRNGSTVIRLDL 141
           +  T ++ +  LV N TVP F+QG +KKA +      F  + V  +AV  NGS + R+DL
Sbjct: 88  SFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTV-IQAVLPNGSAIFRVDL 147

Query: 142 ATAVRYKILLWKTKRENLRLGTEVKVNEQG---VKDNPHGITLNSGAAVPVG-SLVRVIW 201
              V+YK++ WKTKR  L+    ++VNE G   VKD   GI +    + P   +  +V +
Sbjct: 148 KMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKMKISDSSPQRLTFFQVCF 207

Query: 202 S-FWVFVLWIIF 204
           S   V + W+IF
Sbjct: 208 SIICVLMNWLIF 218

[Close]

BLAST of CsaV3_3G023120 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-08
Identity = 42/171 (24.56%), Postives = 74/171 (43.27%), Query Frame = 0


Query: 4   SGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLR 63
           S + C      +   G  A  LWLSLR  +P+  I+ F +  L+Q      N+ + F++ 
Sbjct: 43  SKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQP-TGVENARIAFNVT 102

Query: 64  LKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKK----ALRKESFEARGV 123
           + N N+   VY+D++  ++   D+   L+  L  P F Q  +       L   S      
Sbjct: 103 ILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLN-PFFQQPTNTTIVTGTLTGASLTVNSN 162

Query: 124 DWKAVSRN---GSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGV 168
            W   S +   G+   RLD+ + +R+K+  W +K   +     + V   G+
Sbjct: 163 RWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGL 211

The following BLAST results are available for this feature:

BLAST of CsaV3_3G023120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152027.1	6.7e-110	100.00	protein NDR1 [Cucumis sativus] >KAE8650698.1 hypothetical protein Csa_011410 [Cu...	[more]
XP_008454544.1	5.8e-98	90.05	PREDICTED: protein NDR1-like [Cucumis melo] >KAA0046485.1 protein NDR1-like [Cuc...	[more]
XP_038897087.1	2.6e-90	83.74	protein NDR1-like [Benincasa hispida]	[more]
KAG7024897.1	5.1e-78	73.43	Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592022.1	1.1e-77	73.43	Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsaV3_3G023120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	1.1e-38	45.54	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of CsaV3_3G023120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L886	1.8e-100	95.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1	[more]
A0A5A7TYN2	2.8e-98	90.05	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	2.8e-98	90.05	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]
A0A6J1F5U5	7.2e-78	72.95	protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1	[more]
A0A6J1IH99	8.0e-77	73.89	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]

BLAST of CsaV3_3G023120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	7.7e-40	45.54	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	1.2e-35	45.95	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	1.5e-27	42.19	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	6.0e-08	24.56	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..181
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 4..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G023120.1	CsaV3_3G023120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism