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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGAAGGTCGAGGTAGGAAATACGAGAATAAAAGATTATGTAAAGGAAGAGCCAAAAGAAGGAAAAAAGATTGACGAGAATAGAAGACTATGTAATAAGAAGAACGGTGATCAAGTGCAACAACAAGTTACGGAGGATGGAAAAGAGTATTTCCACTGGAAAGGACTTCCTCCCCTGCTGATGAATCTACAAGTTGGAGACAAGGGCCCGTGAAAAGTTAAGTCTAGAAAAACTCGGGCTCTTGAAAGAAAGAATGGAAGAGAGGAAGATGGAGAAAAAACAGCTTGGAGAGTTGGAGAAGAAAGCGATAAAAGAACTGTTGTTGAGGGAGAGCCTCTAGCAAGAAATCCCCTGCAAGAAGAGGAGGGTGAAAGGGAAAGTGGACTTCACAAAGAAGAAGAAGAAACCTGA mRNA sequence ATGGAGAAGGTCGAGGTAGGAAATACGAGAATAAAAGATTATGTAAAGGAAGAGCCAAAAGAAGGAAAAAAGATTGACGAGAATAGAAGACTATGTAATAAGAAGAACGGTGATCAAGTGCAACAACAAGTTACGGAGGATGGAAAAGAGTATTTCCACTGGAAAGGACTTCCTCCCCTGCTGATGAATCTACAAGTTGGAGACAAGGGCCCAAAGAATGGAAGAGAGGAAGATGGAGAAAAAACAGCTTGGAGAGTTGGAGAAGAAAGCGATAAAAGAACTGTTGTTGAGGGAGAGCCTCTAGCAAGAAATCCCCTGCAAGAAGAGGAGGGTGAAAGGGAAAGTGGACTTCACAAAGAAGAAGAAGAAACCTGA Coding sequence (CDS) ATGGAGAAGGTCGAGGTAGGAAATACGAGAATAAAAGATTATGTAAAGGAAGAGCCAAAAGAAGGAAAAAAGATTGACGAGAATAGAAGACTATGTAATAAGAAGAACGGTGATCAAGTGCAACAACAAGTTACGGAGGATGGAAAAGAGTATTTCCACTGGAAAGGACTTCCTCCCCTGCTGATGAATCTACAAGTTGGAGACAAGGGCCCAAAGAATGGAAGAGAGGAAGATGGAGAAAAAACAGCTTGGAGAGTTGGAGAAGAAAGCGATAAAAGAACTGTTGTTGAGGGAGAGCCTCTAGCAAGAAATCCCCTGCAAGAAGAGGAGGGTGAAAGGGAAAGTGGACTTCACAAAGAAGAAGAAGAAACCTGA Protein sequence MEKVEVGNTRIKDYVKEEPKEGKKIDENRRLCNKKNGDQVQQQVTEDGKEYFHWKGLPPLLMNLQVGDKGPKNGREEDGEKTAWRVGEESDKRTVVEGEPLARNPLQEEEGERESGLHKEEEET*
Homology
BLAST of CsaV3_3G023060 vs. NCBI nr
Match: KGN57982.1 (hypothetical protein Csa_010816 [Cucumis sativus]) HSP 1 Score: 248.1 bits (632), Expect = 4.1e-62 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MEKVEVGNTRIKDYVKEEPKEGKKIDENRRLCNKKNGDQVQQQVTEDGKEYFHWKGLPPL 60
MEKVEVGNTRIKDYVKEEPKEGKKIDENRRLCNKKNGDQVQQQVTEDGKEYFHWKGLPPL
Sbjct: 1 MEKVEVGNTRIKDYVKEEPKEGKKIDENRRLCNKKNGDQVQQQVTEDGKEYFHWKGLPPL 60
Query: 61 LMNLQVGDKGPKNGREEDGEKTAWRVGEESDKRTVVEGEPLARNPLQEEEGERESGLHKE 120
LMNLQVGDKGPKNGREEDGEKTAWRVGEESDKRTVVEGEPLARNPLQEEEGERESGLHKE
Sbjct: 61 LMNLQVGDKGPKNGREEDGEKTAWRVGEESDKRTVVEGEPLARNPLQEEEGERESGLHKE 120
Query: 121 EEET 125
EEET
Sbjct: 121 EEET 124
BLAST of CsaV3_3G023060 vs. ExPASy TrEMBL
Match: A0A0A0LBF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418730 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.0e-62 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MEKVEVGNTRIKDYVKEEPKEGKKIDENRRLCNKKNGDQVQQQVTEDGKEYFHWKGLPPL 60
MEKVEVGNTRIKDYVKEEPKEGKKIDENRRLCNKKNGDQVQQQVTEDGKEYFHWKGLPPL
Sbjct: 1 MEKVEVGNTRIKDYVKEEPKEGKKIDENRRLCNKKNGDQVQQQVTEDGKEYFHWKGLPPL 60
Query: 61 LMNLQVGDKGPKNGREEDGEKTAWRVGEESDKRTVVEGEPLARNPLQEEEGERESGLHKE 120
LMNLQVGDKGPKNGREEDGEKTAWRVGEESDKRTVVEGEPLARNPLQEEEGERESGLHKE
Sbjct: 61 LMNLQVGDKGPKNGREEDGEKTAWRVGEESDKRTVVEGEPLARNPLQEEEGERESGLHKE 120
Query: 121 EEET 125
EEET
Sbjct: 121 EEET 124
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN57982.1 | 4.1e-62 | 100.00 | hypothetical protein Csa_010816 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LBF8 | 2.0e-62 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418730 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 67..124 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 70..124 |
Relationships
The following mRNA feature(s) are a part of this gene:
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