Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TTACTATTCACCTTCTTCTCCAGTCTTCCTTTTCCCATCACGATTAAAGCCCTCGTCACCGCCTTTTCACTATGCACCTCCAACCGCCACAAATCCCACGACTAACGCAGCCTCTGCACGACGACGATCGCCCAGACGAAGCCTTCTCCGCCTCGCGTCTCCATCCATCAGCCATAGCCGCACTGTTTTACCATCGCGAAGCCGTGCCGTCCAGTCTCCCCCAGTCGTCTGTGCCTCGTGCTTCACCCGTGCCGAAGCCAATCATGTGCATTTCCGTCAGCTTCGAGCCTAAGTTGCGTCTCTTCGGGTGAGCTACCGTTGACGTCCGAGCCACGTCCCTTCACCGAGTCGCGTGAGCCGTCTTCATTGATCCGAGCCATTCCGTGTAAGCCGTACGCCAGCCATTTGCAACCGAGTCGTTCCTGTGTGAGCCGTACGCGAGTCATGAGTCTCAAGACTTGAGTTGAAGCCTTGCTAGTCGAGCCACTTTCAGTTTTAGCCGTCTGCAACATATTTAAGCCCTTAGTGAGTTTTTGCTTAGTTCTAGTTGGGTTTGGTACGCCCAAATAATTATTGTTTTAGGTCTTAAATGAGTTAAAACTAATTATATTGTTTGAAGGTTAAGGTTTGGTTGAGGAATTGAGCTATACAAATTTTCATTCAAGGTTGTATTGAGATCAACTTTAAATCTTGGGGTAAGTTTGATTGAGTTTGTTGCCTAATTAAATAGTAAAGTGATAGATTGGCAAAATTATTAAGTTTAAATTTTGTTCATGTTTAAGACGGAGTTTATTAGGAGGATTTGACTCTCAATACTATTTCTTTTGCAAATCTCCCGTTAAGAGATTTTACCTACTAAACCCCACTCCATGCACATTCTGTAACTAGCGTAACTAAGAGAGGTATAATGTGTCTTCTTGAAATGACCTTATAAATGGTTACTTCAGTAACCATATCATGATTGAGATACAATATTATTTGTTTAGGCATGCTATGATCAAATATGTACTTTTTTGAGATGTTGATGTTATGATAAGCATAAATAGGCTATAGTGTTTTTTAGTTTTGCCTGTTAGAGTCAGACCATATGAGATATGAGGGTCCCTCGAGGTCACCACCTATGCATGTCCGTGTGGCTAATTTAAGATGTGATTCGACGGGACCATTTACAGCCTGACTCTTCTATAGGGTGATTCCTTCGGGTTCACCGAGAGCCTAGATATGTCCCTACGGAACCACTGGATAATATGAGTTCGGGAGCGCAATAGTATGCCCATGTTACCGAACTCTAACGAGAGGTTGACAGACACATAGTGAGACTAATATGGGTCTCTTACTGAGTATAAAGTTATACTCACTCTTTTAAATATTTAATTTTCAGGTAAGGATAGAGACAAG mRNA sequence ATGCACCTCCAACCGCCACAAATCCCACGACTAACGCAGCCTCTGCACGACGACGATCGCCCAGACGAAGCCTTCTCCGCCTCGCGTCTCCATCCATCAGCCATAGCCGCACTGTTTTACCATCGCGAAGCCGTGCCGTCCAGTCTCCCCCAGTCGTCTGTGCCTCGTGCTTCACCCGTGCCGAAGCCAATCATGTGCATTTCCGTCAGCTTCGAGCCTAAGTTGCGTCTCTTCGGGTGA Coding sequence (CDS) ATGCACCTCCAACCGCCACAAATCCCACGACTAACGCAGCCTCTGCACGACGACGATCGCCCAGACGAAGCCTTCTCCGCCTCGCGTCTCCATCCATCAGCCATAGCCGCACTGTTTTACCATCGCGAAGCCGTGCCGTCCAGTCTCCCCCAGTCGTCTGTGCCTCGTGCTTCACCCGTGCCGAAGCCAATCATGTGCATTTCCGTCAGCTTCGAGCCTAAGTTGCGTCTCTTCGGGTGA Protein sequence MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPVPKPIMCISVSFEPKLRLFG*
Homology
BLAST of CsaV3_3G023040 vs. NCBI nr
Match: KAE8650693.1 (hypothetical protein Csa_011801 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 1.9e-36 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
Query: 1 MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPV 60
MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPV
Sbjct: 1 MHLQPPQIPRLTQPLHDDDRPDEAFSASRLHPSAIAALFYHREAVPSSLPQSSVPRASPV 60
Query: 61 PKPIMCISVSFEPKLRLFG 80
PKPIMCISVSFEPKLRLFG
Sbjct: 61 PKPIMCISVSFEPKLRLFG 79
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8650693.1 | 1.9e-36 | 100.00 | hypothetical protein Csa_011801 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
Relationships
The following mRNA feature(s) are a part of this gene:
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