CsaV3_3G022930 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G022930
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transcription factor ILR3-like
Location	chr3: 20456474 .. 20458269 (-)
RNA-Seq Expression	CsaV3_3G022930
Synteny	CsaV3_3G022930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCCCCCGAAAATCCCAATTGGTTGTTCGATTATGGTTTGATCGAAGACATCCCTGTACCCGATGGGAATTTCCCGGTCGCGAGCTCAAGCTTCTCTTGGCCTATTCAGCCCTTTAACGGCGCCCATGATTCCGGGTAATCTCAGATTTCTCTCAATTATTCTTTTAAGCTTTTTTCCCCTTCTTCTTATCGAATCTATTGGGGAAGACATAATACTTCCCGGATTTTCTTGTTCATACCGAATTGTTGGAGGTGGGTGACCCCTTTCTCTCATTGCTCAGATTAATTTTCGAGAGGATTTCTTTTAAGCAAGATCTCAACCTGGTTTTGAACATTTTTGGATTGAGTTAGTTATTGGTTCAGACGTCCGACTTATGAATGGAAGTTTAGGAGATTTTGGGTGGGAAATGTTTTGTACAGATGCTATACTTCTGATTGTGTTTGGTGAACTATCATGTCGTTGACCTAATTAATTTAGTATCCACGGGGATGATGGGTGTAGTTAACCAGAGTTTTGTTTTTTGGGCTAAAACTATTTGTTATTGTATTTTAGAAACTTTAAGATTGTGAGGATGATGAACAAAGAACGTCATACCATTGTGCATCTTGGTTTCGATGTTTATGTGTATTTGTCAGTTGACCGTTTGGAAAGAACTCTGATGTTATTTTTAATCCTTTTAGTATGCGAAATAATATGTTTTCTAGTTTGCTTTCAATGGACATGTTGATATAAATTTTGTGTGTACTTATTTCTTTTTCCTTTGACATGTTATTGCAGTGTGGAAATTGATGGTTCGTTGGCAGATCTGGATGGCCGTCTAGAATCAGGCTCAAAGAAGCGGTACGAACCTTTATTGTTACCTTTTAATCTTTTTTGTTTGGACAAAATTATCCTCTTACTTCCTTCAACCCAACATGTTGAACTCAAAGAAAGATCAGCATTTTGCCTCTAAATAATATGCCAGATTTGAATGTCTTTCCGTATGAACAGCTAACCCATGGGGCTGTGTTATTATCACAAGTAGAGCAGCATGGTGTGAATAAATTACAAGACTTCAGAATTTCTTTATGGACTTTCAGGAAGCATTTAATTAGCCATCACTTGTAATTTTGAGTTCCTTTAATTTAAAATTGCCTGAAATTTTCATTAGTATTATGTTTTGATGGGCTCAAAATTACTTATAGGTCAGTTACTATGACAATAAGTGGTTGGGGGTAAGATAGGTAGATATTGCTTTGGTTTACGTGACTAACAGAATTTGAGTATCTTTTTGCTGAGATGCAAGGCATTTGCCCCGTGCACAGCACATGGTATAGATGTTTCCTTATTTGCTATGAGTTAACTGTAGAGTGGAGAGCACTTGGTTTTGTGGCTTAGATGGGGAGTTAGCGACAGCCACGATTCTTCATAGTTTGTCCAATTGAGCTTCAACCCATTTATTTTTATTTACATTTTATGAGAATTTTTATAATTATGCTGTGGATCCATTTGTGTTTGCTTTCATGTATGTTCTCTGTGTGAAATTTGGTTATACATGTTAAAGATATTGAGGTGGTTAAAGTAAACCTAGATAGAGAATAATAACAGATTAGAAATTAGAAAGGAAAATTTCATATGCCATTGAATTAAGTACCCTTGTTTTCTGTTACAGGGTTAGATCTGATTCATGTAGTGCATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGGATAGGCTCAATGACAAGTACTTCCTCTGACCCAAACCAATGTGCAACCAACACATTTTCCCTTCATTTATGTTCATAA

mRNA sequence

ATGGTATCCCCCGAAAATCCCAATTGGTTGTTCGATTATGGTTTGATCGAAGACATCCCTGTACCCGATGGGAATTTCCCGGTCGCGAGCTCAAGCTTCTCTTGGCCTATTCAGCCCTTTAACGGCGCCCATGATTCCGGTGTGGAAATTGATGGTTCGTTGGCAGATCTGGATGGCCGTCTAGAATCAGGCTCAAAGAAGCGGGTTAGATCTGATTCATGTAGTGCATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGGATAGGCTCAATGACAAGTACTTCCTCTGACCCAAACCAATGTGCAACCAACACATTTTCCCTTCATTTATGTTCATAA

Coding sequence (CDS)

ATGGTATCCCCCGAAAATCCCAATTGGTTGTTCGATTATGGTTTGATCGAAGACATCCCTGTACCCGATGGGAATTTCCCGGTCGCGAGCTCAAGCTTCTCTTGGCCTATTCAGCCCTTTAACGGCGCCCATGATTCCGGTGTGGAAATTGATGGTTCGTTGGCAGATCTGGATGGCCGTCTAGAATCAGGCTCAAAGAAGCGGGTTAGATCTGATTCATGTAGTGCATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGGATAGGCTCAATGACAAGTACTTCCTCTGACCCAAACCAATGTGCAACCAACACATTTTCCCTTCATTTATGTTCATAA

Protein sequence

MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGRLESGSKKRVRSDSCSASSSKACREKLRRIGSMTSTSSDPNQCATNTFSLHLCS*

Homology

[Close]

BLAST of CsaV3_3G022930 vs. NCBI nr
Match: KAE8650689.1 (hypothetical protein Csa_009742 [Cucumis sativus])

HSP 1 Score: 230.3 bits (586), Expect = 8.1e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
           MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR
Sbjct: 1   MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60

Query: 61  LESGSKKRVRSDSCSASSSKACREKLRRIGSMTSTSSDPNQCATNTFSLHLCS 114
           LESGSKKRVRSDSCSASSSKACREKLRRIGSMTSTSSDPNQCATNTFSLHLCS
Sbjct: 61  LESGSKKRVRSDSCSASSSKACREKLRRIGSMTSTSSDPNQCATNTFSLHLCS 113

[Close]

BLAST of CsaV3_3G022930 vs. NCBI nr
Match: XP_004151959.3 (LOW QUALITY PROTEIN: transcription factor ILR3 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 2.2e-41
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLR 88
          LESGSKKRVRSDSCSASSSKACREKLR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLR 87

[Close]

BLAST of CsaV3_3G022930 vs. NCBI nr
Match: XP_004151962.3 (transcription factor ILR3 [Cucumis sativus] >KAE8650684.1 hypothetical protein Csa_011799 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 1.8e-40
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPV SSSFSWPIQPFNG+HDSGVEIDGSLADLDG 
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGH 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
          LESGSKKRVRSDSCSASSSKACREKLRR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLRR 88

[Close]

BLAST of CsaV3_3G022930 vs. NCBI nr
Match: XP_031745357.1 (transcription factor ILR3-like, partial [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 3.1e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 4   PENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGRLES 63
           PENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGRLES
Sbjct: 82  PENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGRLES 141

Query: 64  GSKKRVRSDSCSASSSKACREKLRR 89
           GSKKRVRSDSCSASSSKACREKLRR
Sbjct: 142 GSKKRVRSDSCSASSSKACREKLRR 166

[Close]

BLAST of CsaV3_3G022930 vs. NCBI nr
Match: XP_008454558.1 (PREDICTED: transcription factor ILR3 isoform X1 [Cucumis melo] >KAA0046458.1 transcription factor ILR3 isoform X1 [Cucumis melo var. makuwa] >TYJ97754.1 transcription factor ILR3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-39
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPV SSSF+W IQPFNGAHD+GVEIDGSLAD+DGR
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFTWAIQPFNGAHDTGVEIDGSLADVDGR 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
          LESGSKKRVRSDSCSASSSKACREKLRR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLRR 88

[Close]

BLAST of CsaV3_3G022930 vs. ExPASy Swiss-Prot
Match: Q9C682 (Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.5e-13
Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPEN NWL DY LIE      G F   + +F W I   +G+    VE+DG L D D  
Sbjct: 1  MVSPENTNWLSDYPLIE------GAFSDQNPTFPWQI---DGSATVSVEVDGFLCDADVI 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
           E  S+KR++++SC+ S+SKACREK RR
Sbjct: 61 KEPSSRKRIKTESCTGSNSKACREKQRR 79

[Close]

BLAST of CsaV3_3G022930 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.8e-12
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPI-QPFNGAHDSGVEIDGSLADLDG 60
          MVSPEN NW+ D      I    G+F +    FSWP+ QP   + +S   +DGS  + + 
Sbjct: 1  MVSPENANWICDL-----IDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA 60

Query: 61 RLESGSKKRVRSDSCSASSSKACREKLRR 89
            E GSKKR R +S SA+SSKACREK RR
Sbjct: 61 SKEPGSKKRGRCESSSATSSKACREKQRR 84

[Close]

BLAST of CsaV3_3G022930 vs. ExPASy TrEMBL
Match: A0A0A0L7P5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G416140 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPV SSSFSWPIQPFNG+HDSGVEIDGSLADLDGR
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGR 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
          LESGSKKRVRSDSCSASSSKACREKLRR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLRR 88

[Close]

BLAST of CsaV3_3G022930 vs. ExPASy TrEMBL
Match: A0A0A0L7N8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G415100 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.8e-41
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPV SSSFSWPIQPFNG+HDSGVEIDGSLADLDG 
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWPIQPFNGSHDSGVEIDGSLADLDGH 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
          LESGSKKRVRSDSCSASSSKACREKLRR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLRR 88

[Close]

BLAST of CsaV3_3G022930 vs. ExPASy TrEMBL
Match: A0A5A7TUD2 (Transcription factor ILR3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00580 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.8e-40
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPV SSSF+W IQPFNGAHD+GVEIDGSLAD+DGR
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFTWAIQPFNGAHDTGVEIDGSLADVDGR 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
          LESGSKKRVRSDSCSASSSKACREKLRR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLRR 88

[Close]

BLAST of CsaV3_3G022930 vs. ExPASy TrEMBL
Match: A0A1S3C042 (transcription factor ILR3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494950 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.8e-40
Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPV SSSF+W IQPFNGAHD+GVEIDGSLAD+DGR
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFTWAIQPFNGAHDTGVEIDGSLADVDGR 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
          LESGSKKRVRSDSCSASSSKACREKLRR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLRR 88

[Close]

BLAST of CsaV3_3G022930 vs. ExPASy TrEMBL
Match: A0A5D3BHU4 (Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00660 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 84/88 (95.45%), Postives = 85/88 (96.59%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPENPNWLFDYGLIEDIPVPDGNFPV SSSFSW IQ FNGAHD+GVEIDGSLADLDGR
Sbjct: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVTSSSFSWAIQTFNGAHDTGVEIDGSLADLDGR 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
          LESGSKKRVRSDSCSASSSKACREKLRR
Sbjct: 61 LESGSKKRVRSDSCSASSSKACREKLRR 88

[Close]

BLAST of CsaV3_3G022930 vs. TAIR 10
Match: AT1G51070.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 5.3e-14
Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPIQPFNGAHDSGVEIDGSLADLDGR 60
          MVSPEN NWL DY LIE      G F   + +F W I   +G+    VE+DG L D D  
Sbjct: 1  MVSPENTNWLSDYPLIE------GAFSDQNPTFPWQI---DGSATVSVEVDGFLCDADVI 60

Query: 61 LESGSKKRVRSDSCSASSSKACREKLRR 89
           E  S+KR++++SC+ S+SKACREK RR
Sbjct: 61 KEPSSRKRIKTESCTGSNSKACREKQRR 79

[Close]

BLAST of CsaV3_3G022930 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.0e-13
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 1  MVSPENPNWLFDYGLIEDIPVPDGNFPVASSSFSWPI-QPFNGAHDSGVEIDGSLADLDG 60
          MVSPEN NW+ D      I    G+F +    FSWP+ QP   + +S   +DGS  + + 
Sbjct: 1  MVSPENANWICDL-----IDADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA 60

Query: 61 RLESGSKKRVRSDSCSASSSKACREKLRR 89
            E GSKKR R +S SA+SSKACREK RR
Sbjct: 61 SKEPGSKKRGRCESSSATSSKACREKQRR 84

[Close]

BLAST of CsaV3_3G022930 vs. TAIR 10
Match: AT1G51070.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 45/145 (31.03%), Postives = 57/145 (39.31%), Query Frame = 0


Query: 1   MVSPENPNWLFDYGLIE------DIPVP---DGNFPVASSSFSW---------------- 60
           MVSPEN NWL DY LIE      +   P   DG+  V   S+ W                
Sbjct: 1   MVSPENTNWLSDYPLIEGAFSDQNPTFPWQIDGSATVRIGSYIWRSCYGCVITQLVFRCS 60

Query: 61  -------------------------PIQPFNGAHD-------SGVEIDGSLADLDGRLES 89
                                    P+ P               VE+DG L D D   E 
Sbjct: 61  CCDRDIGLLHKSILCFFFCLRFAYVPLFPKEVDESRSLPIAKGSVEVDGFLCDADVIKEP 120

The following BLAST results are available for this feature:

BLAST of CsaV3_3G022930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650689.1	8.1e-57	100.00	hypothetical protein Csa_009742 [Cucumis sativus]	[more]
XP_004151959.3	2.2e-41	100.00	LOW QUALITY PROTEIN: transcription factor ILR3 [Cucumis sativus]	[more]
XP_004151962.3	1.8e-40	96.59	transcription factor ILR3 [Cucumis sativus] >KAE8650684.1 hypothetical protein C...	[more]
XP_031745357.1	3.1e-40	100.00	transcription factor ILR3-like, partial [Cucumis sativus]	[more]
XP_008454558.1	2.0e-39	94.32	PREDICTED: transcription factor ILR3 isoform X1 [Cucumis melo] >KAA0046458.1 tra...	[more]

BLAST of CsaV3_3G022930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C682	7.5e-13	48.86	Transcription factor bHLH115 OS=Arabidopsis thaliana OX=3702 GN=BHLH115 PE=1 SV=...	[more]
Q9FH37	2.8e-12	47.19	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]

BLAST of CsaV3_3G022930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7P5	2.3e-41	97.73	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G416140 PE=4 S...	[more]
A0A0A0L7N8	8.8e-41	96.59	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G415100 PE=4 S...	[more]
A0A5A7TUD2	9.8e-40	94.32	Transcription factor ILR3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C042	9.8e-40	94.32	transcription factor ILR3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494950 PE=...	[more]
A0A5D3BHU4	1.7e-39	95.45	Transcription factor ILR3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of CsaV3_3G022930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51070.1	5.3e-14	48.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G54680.1	2.0e-13	47.19	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51070.2	1.4e-06	31.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46133:SF24	BHLH DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..88
IPR044818	Transcription factor ILR3-like	PANTHER	PTHR46133	BHLH TRANSCRIPTION FACTOR	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G022930.1	CsaV3_3G022930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity