CsaV3_3G022900 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G022900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ulp1-like peptidase
Location	chr3: 20432377 .. 20434176 (+)
RNA-Seq Expression	CsaV3_3G022900
Synteny	CsaV3_3G022900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATGCTTGTGTTAATGATATCATTGTATTTGTAAGTTTGGGCCTACGAGATAGTGTTGTCCATCAGTGGTCGAGTTGTCTATAGGGAGTTATCATCTACGATACCACGCATCATGCAATGAAGTTGCACAAACTCACCTGGGTTGAAGGTGATTAGGTCTCAGGTTTTCGAGTCTTAAATGGTACATTATGATTCATTTTCTTCCTCCACATTCAATATAGTATTCTAGGGTTTTGTATCTTAATTAACACAAGTTGATGTTCCAATTCCAACCCATATACATGAGATTGAACCTACAGATGACTAACGTACTTACCTTGATCGGAGTCTTAAAATTCCTAGCTACAAGGAAGGCCCGCATGACCCTCATCCTCAGCACTTCGAGCATGCCTCACCACGCATTCATGTCGAGCATCCCCCCTCCTCCTCATATCCAGCATCCCCATTCTCTTCCTTGGGATGATGGTTACCCCTCCACATCTACGAAGCGGCCTATTTAGACTGATAGACTCTGGATGATGTGTGATTGCAGCCAACATATACGTCACCTAAAAGGGAGATTAGATTAGATGAAGGACTTTTTAAAACGAATGGAGTCATCAGTGTTATCAATTATAAATGAGCTTTTGATGGCATTGATTAAGGTATTATTATTATTCACATGGAACTTTTTTATTATTTTTGTCTTAATTAAGTATTAGTCCTTACTTATGTTTCTACTGCTTCCTTAATAAGGTAAGGTAGTTGACTCCCAACCATGCTATGATGGTGGTGAGAGTACGTCCTTCAATGCATCAGAGGCTCAAACTCTGGTTGGCAACGTATTCATTAGATGTTCCTACTTTTATCAATGATGAACAGCCTACTGACAAGGAGACAGGAACATCCGTTAGTGACAACCCCAAATATGGTATCATATCGATCGACGTACCATCAAGGGGCGAGGATGTGCGACCACTACCTCCCCAACCCATGCTAGAGCCGAAGGATGAGGTAAATGATTTCAAATTTTGCATTCCTTTATATAGTGACTTTAGTAATAATAAAACTAACTAATAAACTGAATTGCAAATTGTGCAGTCTATTGAGTTTGATGTGGAGGTCATCTCACCTTTAGTTTTTCCAGATGTCATACTTAAGGAAAGGACGACAAGGAAGAGAGGTATACCCTGGAAATTGTGATTCTCAATTATCGAACAAGGACAAGGGGCTAAGATAAGAAAGAGGGTGCGCCCCTACAATCCTGTTTGCAAGATCCTCATGAAGTTTGATAAACAATTCTCGGCATACCTCACTGACCCTTGGAGAGAGGAGTTATAGAATAGGGTTAGATGCTCGAGGGCCCTTTTATGGTTCCTAGACCTTCTAACCCCACAAACATTCACGGACGACAACGTATGTATTTAGGGGTGTAAATGAGTTGGGTTGGGGGACATTCTCAACCTAACCCATACATTTTGGATTGGTTGGGTTGGCAACCCGAATTGTATTACAAACCTAGCCCAACCTAACCCTTAAAATATGGGTTGGGTTGGGTTTTGAGTTTTTGTTTTTTTAAACGACGACTTTCAAATTTGATACATGATCTTGGGGTCTTAGTTGCACCAAGATACCTCGAGATGAAAGAATTATATCTTTAATTTATTCAATCTTGGACATACATTGCCCCTAAATGCCCTATGATGAAAGAATTCT

mRNA sequence

ATGATGGTGGTGAGAGTACGTCCTTCAATGCATCAGAGGCTCAAACTCTGGTTGGCAACGTATTCATTAGATGTTCCTACTTTTATCAATGATGAACAGCCTACTGACAAGGAGACAGGAACATCCGTTAGTGACAACCCCAAATATGGTATCATATCGATCGACGTACCATCAAGGGGCGAGGATGTGCGACCACTACCTCCCCAACCCATGCTAGAGCCGAAGGATGAGTCTATTGAGTTTGATGTGGAGGTCATCTCACCTTTAGTTTTTCCAGATGTCATACTTAAGGAAAGGACGACAAGGAAGAGAGGTATACCCTGGAAATTGTGA

Coding sequence (CDS)

ATGATGGTGGTGAGAGTACGTCCTTCAATGCATCAGAGGCTCAAACTCTGGTTGGCAACGTATTCATTAGATGTTCCTACTTTTATCAATGATGAACAGCCTACTGACAAGGAGACAGGAACATCCGTTAGTGACAACCCCAAATATGGTATCATATCGATCGACGTACCATCAAGGGGCGAGGATGTGCGACCACTACCTCCCCAACCCATGCTAGAGCCGAAGGATGAGTCTATTGAGTTTGATGTGGAGGTCATCTCACCTTTAGTTTTTCCAGATGTCATACTTAAGGAAAGGACGACAAGGAAGAGAGGTATACCCTGGAAATTGTGA

Protein sequence

MMVVRVRPSMHQRLKLWLATYSLDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKERTTRKRGIPWKL*

Homology

[Close]

BLAST of CsaV3_3G022900 vs. NCBI nr
Match: KAE8650686.1 (hypothetical protein Csa_011658 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MMVVRVRPSMHQRLKLWLATYSLDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRG 60
           MMVVRVRPSMHQRLKLWLATYSLDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRG
Sbjct: 1   MMVVRVRPSMHQRLKLWLATYSLDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRG 60

Query: 61  EDVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKERTTRKRGIPWKL 111
           EDVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKERTTRKRGIPWKL
Sbjct: 61  EDVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKERTTRKRGIPWKL 110

[Close]

BLAST of CsaV3_3G022900 vs. NCBI nr
Match: KAA0051324.1 (hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-15
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 23  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFD 82
           +++P  I D QPT++E  TS+S++P+ G+I IDVPS GEDV P P QPML+ K E IEFD
Sbjct: 60  VNIPAPIIDAQPTNEEARTSISEDPRDGVI-IDVPSEGEDVSPPPVQPMLDLKYEPIEFD 119

Query: 83  VEVISPLVFPDVILKERTTRKRGIPWKL 111
           VEV  P VF  V+ K++TTRKR I  KL
Sbjct: 120 VEVKLPYVFSHVVPKKKTTRKRDIRKKL 146

[Close]

BLAST of CsaV3_3G022900 vs. NCBI nr
Match: KAA0046543.1 (hypothetical protein E6C27_scaffold114G00630 [Cucumis melo var. makuwa] >TYK28714.1 hypothetical protein E5676_scaffold403G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 23  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFD 82
           +D+P    D+Q  D +T TS+S++P+ GI+ ID+ SRGEDV P P Q +LE K++ I   
Sbjct: 1   MDIPISNIDKQHVDDKTRTSISEDPEDGIVPIDISSRGEDVPPPPVQVLLELKEKGI--- 60

Query: 83  VEVISPLVFPDVILKERTTRKRGIP 108
            +VI P  F DV+ K+RTTRKRGIP
Sbjct: 61  -KVIPPFDFIDVVPKKRTTRKRGIP 81

[Close]

BLAST of CsaV3_3G022900 vs. NCBI nr
Match: KAA0038872.1 (hypothetical protein E6C27_scaffold1170G00290 [Cucumis melo var. makuwa] >TYJ96012.1 hypothetical protein E5676_scaffold2612G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-11
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 23  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFD 82
           +DVP  I D+QP D ET TS+S +   GII ID+PSR EDV P   QP+LE K E     
Sbjct: 106 VDVPPPIIDDQPIDNETRTSISKDLGDGIILIDIPSRDEDVSPTSVQPLLESKKER---- 165

Query: 83  VEVISPLVFPDVILKERTTRKRGIP 108
               SP +F DV+ K R TRKRGIP
Sbjct: 166 ---SSPFIFSDVVPKYRMTRKRGIP 183

[Close]

BLAST of CsaV3_3G022900 vs. NCBI nr
Match: KAA0061393.1 (hypothetical protein E6C27_scaffold749G00820 [Cucumis melo var. makuwa] >TYK14747.1 hypothetical protein E5676_scaffold692G00840 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 4.3e-10
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 40  GTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKER 99
           GTS+ ++ K GII ID PS  +DV P   QP L+ K ESIEFD++VIS  VF D ILKER
Sbjct: 2   GTSIREDLKDGIIPIDEPSSSKDVLPPSAQPTLKSKSESIEFDMKVISSPVFSDGILKER 61

Query: 100 TTRKRGI 107
            TRKRGI
Sbjct: 62  MTRKRGI 68

[Close]

BLAST of CsaV3_3G022900 vs. ExPASy TrEMBL
Match: A0A0A0L860 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415130 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.6e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 2   MVVRVRPSMHQRLKLWLATYSLDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGE 61
           MVVRVRPSMHQRLKLWLATYSLDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGE
Sbjct: 1   MVVRVRPSMHQRLKLWLATYSLDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGE 60

Query: 62  DVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKERTTRKRGIPWKL 111
           DVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKERTTRKRGIPWKL
Sbjct: 61  DVRPLPPQPMLEPKDESIEFDVEVISPLVFPDVILKERTTRKRGIPWKL 109

[Close]

BLAST of CsaV3_3G022900 vs. ExPASy TrEMBL
Match: A0A5A7U7N5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00410 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0


Query: 23  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFD 82
           +++P  I D QPT++E  TS+S++P+ G+I IDVPS GEDV P P QPML+ K E IEFD
Sbjct: 60  VNIPAPIIDAQPTNEEARTSISEDPRDGVI-IDVPSEGEDVSPPPVQPMLDLKYEPIEFD 119

Query: 83  VEVISPLVFPDVILKERTTRKRGIPWKL 111
           VEV  P VF  V+ K++TTRKR I  KL
Sbjct: 120 VEVKLPYVFSHVVPKKKTTRKRDIRKKL 146

[Close]

BLAST of CsaV3_3G022900 vs. ExPASy TrEMBL
Match: A0A5A7TSM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00310 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 23  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFD 82
           +D+P    D+Q  D +T TS+S++P+ GI+ ID+ SRGEDV P P Q +LE K++ I   
Sbjct: 1   MDIPISNIDKQHVDDKTRTSISEDPEDGIVPIDISSRGEDVPPPPVQVLLELKEKGI--- 60

Query: 83  VEVISPLVFPDVILKERTTRKRGIP 108
            +VI P  F DV+ K+RTTRKRGIP
Sbjct: 61  -KVIPPFDFIDVVPKKRTTRKRGIP 81

[Close]

BLAST of CsaV3_3G022900 vs. ExPASy TrEMBL
Match: A0A5A7T5V7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00190 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11
Identity = 45/85 (52.94%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 23  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDVRPLPPQPMLEPKDESIEFD 82
           +DVP  I D+QP D ET TS+S +   GII ID+PSR EDV P   QP+LE K E     
Sbjct: 106 VDVPPPIIDDQPIDNETRTSISKDLGDGIILIDIPSRDEDVSPTSVQPLLESKKER---- 165

Query: 83  VEVISPLVFPDVILKERTTRKRGIP 108
               SP +F DV+ K R TRKRGIP
Sbjct: 166 ---SSPFIFSDVVPKYRMTRKRGIP 183

[Close]

BLAST of CsaV3_3G022900 vs. ExPASy TrEMBL
Match: A0A0A0KIM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0


Query: 23  LDVPTFINDEQPTDKETGTSVSDNPKYGIISIDVPSRGEDV-----RPLPPQPMLEPKDE 82
           +DV T   D++  D+ET TSVSDNPK GII IDVPS+GED+     +PLPPQP+LE KDE
Sbjct: 233 VDVFTSTIDDKLVDEETRTSVSDNPKDGIIPIDVPSKGEDMPPLPPQPLPPQPLLESKDE 292

Query: 83  SIEFDVEVISPLVFPDVILKERTTRK 104
                     PLVF DV+ K+  T+K
Sbjct: 293 ----------PLVFSDVVPKKGITKK 308

The following BLAST results are available for this feature:

BLAST of CsaV3_3G022900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650686.1	2.6e-55	100.00	hypothetical protein Csa_011658 [Cucumis sativus]	[more]
KAA0051324.1	2.6e-15	56.82	hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa]	[more]
KAA0046543.1	7.8e-12	50.59	hypothetical protein E6C27_scaffold114G00630 [Cucumis melo var. makuwa] >TYK2871...	[more]
KAA0038872.1	2.3e-11	52.94	hypothetical protein E6C27_scaffold1170G00290 [Cucumis melo var. makuwa] >TYJ960...	[more]
KAA0061393.1	4.3e-10	61.19	hypothetical protein E6C27_scaffold749G00820 [Cucumis melo var. makuwa] >TYK1474...	[more]

BLAST of CsaV3_3G022900 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G022900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L860	3.6e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415130 PE=4 SV=1	[more]
A0A5A7U7N5	1.2e-15	56.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TSM6	3.8e-12	50.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T5V7	1.1e-11	52.94	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KIM1	1.9e-11	53.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001020 PE=4 SV=1	[more]

BLAST of CsaV3_3G022900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G022900.1	CsaV3_3G022900.1	mRNA