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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCATTACAGGGATCCTGCACGATTCACATCATCGCACAATCATTTCTCATCACTGGGACCTAGGATTCTCCCATCACTTGAACCTGGGACACATCTCAACCAACATCTTGCAAGTTTCCTGGGATATCCACCAGTGGCTCACAAATTATTTCTCACCACATGGGTCTGGGAGTCTCCTCTCACCTAGATTTGAAAGTCACTCTCAACCAGCGTCTTACGAGTTTTTTGGGTTATTCATCATCATTTCACAAATATTTTATTTCCTCAAGGTCATGGGACTCTCCCTTCACCTAGACTTGGAATTCATTCTCAACCAGCACCTTATGAGTTTCCTGGGATACCTATCATTATTTCACAAATCGTTCATCGCCTCGTAG mRNA sequence ATGCATTACAGGGATCCTGCACGATTCACATCATCGCACAATCATTTCTCATCACTGGGACCTAGGATTCTCCCATCACTTGAACCTGGGACACATCTCAACCAACATCTTGCAAGTTTCCTGGGATATCCACCAGTGGCTCACAAATTATTTCTCACCACATGGGTCATGGGACTCTCCCTTCACCTAGACTTGGAATTCATTCTCAACCAGCACCTTATGAGTTTCCTGGGATACCTATCATTATTTCACAAATCGTTCATCGCCTCGTAG Coding sequence (CDS) ATGCATTACAGGGATCCTGCACGATTCACATCATCGCACAATCATTTCTCATCACTGGGACCTAGGATTCTCCCATCACTTGAACCTGGGACACATCTCAACCAACATCTTGCAAGTTTCCTGGGATATCCACCAGTGGCTCACAAATTATTTCTCACCACATGGGTCATGGGACTCTCCCTTCACCTAGACTTGGAATTCATTCTCAACCAGCACCTTATGAGTTTCCTGGGATACCTATCATTATTTCACAAATCGTTCATCGCCTCGTAG Protein sequence MHYRDPARFTSSHNHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTTWVMGLSLHLDLEFILNQHLMSFLGYLSLFHKSFIAS*
Homology
BLAST of CsaV3_3G022830 vs. NCBI nr
Match: KGN57959.1 (hypothetical protein Csa_009678 [Cucumis sativus]) HSP 1 Score: 188.0 bits (476), Expect = 3.7e-44 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 1 MHYRDPARFTSSHNHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTTWVMGLS 60
MHYRDPARFTSSHNHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTTWVMGLS
Sbjct: 1 MHYRDPARFTSSHNHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTTWVMGLS 60
Query: 61 LHLDLEFILNQHLMSFLGYLSLFHKSFIAS 91
LHLDLEFILNQHLMSFLGYLSLFHKSFIAS
Sbjct: 61 LHLDLEFILNQHLMSFLGYLSLFHKSFIAS 90
BLAST of CsaV3_3G022830 vs. ExPASy TrEMBL
Match: A0A0A0LAI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G414050 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
Query: 1 MHYRDPARFTSSHNHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTTWVMGLS 60
MHYRDPARFTSSHNHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTTWVMGLS
Sbjct: 1 MHYRDPARFTSSHNHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTTWVMGLS 60
Query: 61 LHLDLEFILNQHLMSFLGYLSLFHKSFIAS 91
LHLDLEFILNQHLMSFLGYLSLFHKSFIAS
Sbjct: 61 LHLDLEFILNQHLMSFLGYLSLFHKSFIAS 90
BLAST of CsaV3_3G022830 vs. ExPASy TrEMBL
Match: A0A5D3DWV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00640 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.3e-04 Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 0
Query: 14 NHFSSLGPRILPSLEPGTHLNQHLASFLGYPPVAHKLFLTT 55
NHFS P I PS THLNQHL S+LG+PP H LFLT+
Sbjct: 29 NHFSPNQPWIFPSPRLETHLNQHLTSYLGFPPSFHNLFLTS 69
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KGN57959.1 | 3.7e-44 | 100.00 | hypothetical protein Csa_009678 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0LAI4 | 1.8e-44 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G414050 PE=4 SV=1 | [more] |
| A0A5D3DWV2 | 5.3e-04 | 60.98 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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