|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CAACTTACCCAAATATTCGGACACCACAATCGTGATTCAACTCGGGTGAGAACATATGGATTCCGATTCCCCCGCTCTCACCACTGGCCACTCCCTCGCCTGAGACTCTTTCTTGTTGTGTTCCTCGATGACAAAACGAGCGAGTTCATGACATCGATGGAGTTGGAAGCTCCCTCAGAATCGTCAACGCCTTCAAGTGTGAACGCCATAAGGAGTGGATCATCTTT mRNA sequence CAACTTACCCAAATATTCGGACACCACAATCGTGATTCAACTCGGGTGAGAACATATGGATTCCGATTCCCCCGCTCTCACCACTGGCCACTCCCTCGCCTGAGACTCTTTCTTGTTGTGTTCCTCGATGACAAAACGAGCGAGTTCATGACATCGATGGAGTTGGAAGCTCCCTCAGAATCGTCAACGCCTTCAAGTGTGAACGCCATAAGGAGTGGATCATCTTT Coding sequence (CDS) CAACTTACCCAAATATTCGGACACCACAATCGTGATTCAACTCGGGTGAGAACATATGGATTCCGATTCCCCCGCTCTCACCACTGGCCACTCCCTCGCCTGAGACTCTTTCTTGTTGTGTTCCTCGATGACAAAACGAGCGAGTTCATGACATCGATGGAGTTGGAAGCTCCCTCAGAATCGTCAACGCCTTCAAGTGTGAACGCCATAAGGAGTGGATCATCTTT Protein sequence QLTQIFGHHNRDSTRVRTYGFRFPRSHHWPLPRLRLFLVVFLDDKTSEFMTSMELEAPSESSTPSSVNAIRSGSSX
Homology
BLAST of CsaV3_3G022790 vs. NCBI nr
Match: KAE8650681.1 (hypothetical protein Csa_011516, partial [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 4.2e-33 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 1 QLTQIFGHHNRDSTRVRTYGFRFPRSHHWPLPRLRLFLVVFLDDKTSEFMTSMELEAPSE 60
QLTQIFGHHNRDSTRVRTYGFRFPRSHHWPLPRLRLFLVVFLDDKTSEFMTSMELEAPSE
Sbjct: 1 QLTQIFGHHNRDSTRVRTYGFRFPRSHHWPLPRLRLFLVVFLDDKTSEFMTSMELEAPSE 60
Query: 61 SSTPSSVNAIRSGSS 76
SSTPSSVNAIRSGSS
Sbjct: 61 SSTPSSVNAIRSGSS 75
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8650681.1 | 4.2e-33 | 100.00 | hypothetical protein Csa_011516, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 54..75 |
Relationships
The following mRNA feature(s) are a part of this gene:
|
